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Reference SNP (refSNP) Cluster Report: rs3087243                 ** With other allele **
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:102/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqbySubmitterWith1000GenomeData
Citation:PubMedLitVarNEW
Association:NHGRI GWAS PheGenI
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:A/G (FWD)
Allele Origin:
Ancestral Allele:G
Variation Viewer:link to VariationViewer
Clinical Significance:With other allele [ClinVar]
MAF/MinorAlleleCount:A=0.3690/1848 (1000 Genomes)
A=0.3593/45112 (TOPMED)
HGVS Names
  • CM000664.2:g.203874196G>A
  • NC_000002.11:g.204738919G>A
  • NC_000002.12:g.203874196G>A
  • NG_011502.1:g.11411G>A
  • NM_001037631.2:c.*1421G>A
  • NM_005214.4:c.*1384G>A
  • XR_241294.1:n.2154G>A
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss276866030 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs3087243 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss4318740FHCRC|AAE_7byFreqfwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat11/13/0104/07/04102Genomicunknown
ss16343657JDRF_WT_DIL|DIL90rev/BC/Tataaaggactgctatgtctgtgttaacccagttatatcccaaatagtggtgaagaaatca01/21/0401/23/04120Genomicunknown
ss44315036ABI|hCV3296043byFreqfwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat07/18/0511/03/06126Genomicunknown
ss48293461SNP500CANCER|CTLA4-07byFreqfwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatarcagtcctttat08/19/0511/03/06126Genomicunknown
ss66079983AFFY|SNP_A-1911322byFreqrev/BC/Ttgtctgtgttaacccagttatatcccaaatag10/27/0603/31/08127Genomicunknown
ss76019754AFFY|AFFY_6_1M_SNP_A-1911322rev/BC/Ttgtctgtgttaacccagttatatcccaaatag08/28/0708/29/07130Genomicunknown
ss81930522KRIBB_YJKIM|KHS162415fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat11/30/0712/01/07130Genomicunknown
ss83655529HGSV|Cor18956_SNV_20070510.chr2_204564425fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat11/30/0712/05/07130Genomicunknown
ss97114049HUMANGENOME_JCVI|1103658341768fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat03/28/0803/28/08130Genomicunknown
ss103661233BGI|BGI_rs3087243fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat06/06/0806/18/09131Genomicunknown
ss1106064441000GENOMES|CEU.trio.12.15.2008_564214_chr2_204447164fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat12/17/0812/17/08130Genomicunknown
ss120254415WTCCC|NT_005403.16_54948336fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat04/10/0904/24/09131Genomicunknown
ss139927002ENSEMBL|ENSSNP3702920fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat12/08/0810/16/09131Genomicunknown
ss160608721ILLUMINA|HumanOmni1-Quad_v1-0_B_rs3087243-128_B_R_1561715992rev/BC/Tataaaggactgctatgtctgtgttaacccagttatatcccaaatagtggtgaagaaatca08/04/0910/04/09131Genomicunknown
ss165840550COMPLETE_GENOMICS|NA07022_36_chr2_204447164fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat09/29/0909/30/09132Genomicunknown
ss170499862AFFY|GenomeWideSNP_5_SNP_A-1911322rev/BC/Ttgtctgtgttaacccagttatatcccaaatag10/01/0910/02/09132Genomicunknown
ss201621694BUSHMAN|BUSHMAN-chr2-204447163fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat02/16/1003/08/10132Genomicunknown
ss205828043BCM-HGSC-SUB|BCM_CMT_1011-411393fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat03/15/1003/16/10132Genomicunknown
ss2197620141000GENOMES|pilot_1_YRI_1571697_chr2_204447164fwd/A/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat04/22/1004/22/10132Genomicunknown
ss2315503921000GENOMES|pilot_1_CEU_1155021_chr2_204447164fwd/A/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat05/01/1005/01/10132Genomicunknown
ss2390199611000GENOMES|pilot_1_CHB+JPT_905038_chr2_204447164fwd/A/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat05/01/1005/01/10132Genomicunknown
ss244293534ILLUMINA|CVDSNP55v1_A_rs3087243rev/BC/Tataaaggactgctatgtctgtgttaacccagttatatcccaaatagtggtgaagaaatca06/10/1006/10/10132Genomicunknown
ss253824254BL|SNP207902_2_204447164fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat08/18/1008/19/10134Genomicunknown
ss276866030GMI|GMI_AK_SNP_1186239fwd/A/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat12/16/1012/16/10137Genomicunknown
ss292470245PJP|SNP_1976603_chr2_204447164fwd/A/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat01/21/1101/21/11134Genomicunknown
ss410928037ILLUMINA|Cardio-Metabo_Chip_11395247_A_rs3087243rev/BC/Tataaaggactgctatgtctgtgttaacccagttatatcccaaatagtggtgaagaaatca06/07/1106/07/11135Genomicunknown
ss480747200ILLUMINA|HumanOmni2.5-4v1_B_rs3087243-128_B_R_1616887480fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc01/30/1210/28/16137Genomicunknown
ss480763079ILLUMINA|HumanOmniExpress-12v1_C_rs3087243-131_B_R_1852962520fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc01/30/1210/27/16137Genomicunknown
ss481649285ILLUMINA|HumanOmni1-Quad_v1-0_C_rs3087243-131_B_R_1852962520fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc01/30/1208/28/15146Genomicunknown
ss485168379ILLUMINA|HumanOmni2.5-4v1_D_rs3087243-131_B_R_1852962520fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc01/30/1210/28/16137Genomicunknown
ss491330048EXOME_CHIP|.GWAS._46275_chr_2_204738919fwd/TA/Gtgatttcttcaccactatttgggatataactgggttaacacagacatagcagtcctttat03/05/1203/05/12137Genomicunknown
ss537159729ILLUMINA|HumanOmni5-4v1_B_rs3087243-131_B_R_1908852217fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc06/22/1208/28/15146Genomicunknown
ss556162565TISHKOFF|snp_chr2_204738919fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc11/22/1211/23/12138Genomicunknown
ss649829304SSMP|2_204738919fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc12/14/1202/10/15138Genomicunknown
ss778515281ILLUMINA|HumanOmni25Exome-8v1_A_rs3087243-131_B_R_1852962520fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/30/1307/09/15146Genomicunknown
ss780684157ILLUMINA|HumanOmni25Exome-8v1_A_exm-rs3087243-131_B_R_1990482214fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/30/1307/09/15146Genomicunknown
ss783030400ILLUMINA|HumanOmni2.5-4v1_H_rs3087243-131_B_R_1852962520fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/30/1307/28/15146Genomicunknown
ss783357588ILLUMINA|HumanOmniExpressExome-8v1_A_exm-rs3087243-131_B_R_1990482214fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/31/1306/19/15146Genomicunknown
ss783990103ILLUMINA|HumanOmniExpressExome-8v1_A_rs3087243-131_B_R_1908852217fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/31/1306/19/15146Genomicunknown
ss832288016ILLUMINA|HumanOmniExpress-12v1_H_rs3087243-131_B_R_1852962520fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc09/17/1306/18/15146Genomicunknown
ss833971594ILLUMINA|HumanOmni2.5-8v1_A_rs3087243-131_B_R_1852962520fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc09/18/1307/28/15146Genomicunknown
ss977865114EVA-GONL|EVA-GONL_rs3087243fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc04/23/1404/23/14142Genomicunknown
ss1069868620JMKIDD_LAB|HGDP_WGS_chr2_204738919fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc07/10/1407/10/14142Genomicunknown
ss13012863601000GENOMES|PHASE3_V1_12440644fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc08/16/1408/16/14142Genomicunknown
ss1397317537HAMMER_LAB|HAMMER_LAB_rs3087243fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc09/30/1407/15/15146Genomicunknown
ss1428882722DDI|DDI_rs3087243fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc11/04/1411/04/14144Genomicunknown
ss1579284674EVA_GENOME_DK|EVA_GENOME_DK_snv_rs3087243fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc02/19/1502/20/15144Genomicunknown
ss1587317315EVA_DECODE|EVA_DECODE_2_204447164_1519236_rs3087243fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc03/02/1503/03/15144Genomicunknown
ss1605600452EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_2_204738919_6838992fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc03/04/1503/04/15144Genomicunknown
ss1648594485EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_2_204738919_6838992fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc03/04/1503/04/15144Genomicunknown
ss1712523999EVA_SVP|EVA_SVP_218544fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc03/12/1503/12/15144Genomicunknown
ss1752334027ILLUMINA|OmniExpressExome-8v1-1_B_exm-rs3087243-131_B_R_1990482214fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/27/1506/09/15146Genomicunknown
ss1752334028ILLUMINA|OmniExpressExome-8v1-1_B_rs3087243-131_B_R_1908852217fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/27/1506/09/15146Genomicunknown
ss1798216445HAMMER_LAB|Hsieh_1306239fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc07/15/1507/15/15146Genomicunknown
ss1917758759ILLUMINA|HumanExome-12v1-1_B_exm-rs3087243-131_B_R_1990482214fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc10/16/1510/16/15147Genomicunknown
ss1921111733WEILL_CORNELL_DGM|SNV:chr2:204738919fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc10/16/1510/16/15147Genomicunknown
ss1946063985ILLUMINA|HumanCoreExome-12v1-0_C_exm-rs3087243-131_B_R_1990482214fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc10/29/1510/29/15147Genomicunknown
ss1958496544ILLUMINA|exm-rs3087243-131_B_R_1990482214fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc11/13/1511/13/15147Genomicunknown
ss1969002602GENOMED|rs3087243fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc02/16/1602/16/16147Genomicunknown
ss2021098287JJLAB|SNP1600842fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc08/29/1608/30/16149Genomicunknown
ss2094914916ILLUMINA|Immuno_BeadChip_11419691_B_imm_2_204447164-1_T_F_1670152253fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc09/27/1609/27/16150Genomicunknown
ss2095108181ILLUMINA|InfiniumImmunoArray-24v2-0_A_imm_2_204447164-1_T_F_2310596921fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc09/27/1609/27/16150Genomicunknown
ss2095108182ILLUMINA|InfiniumImmunoArray-24v2-0_A_rs3087243-138_B_R_2264341071fwd/TA/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc09/27/1609/27/16150Genomicunknown
ss2149163761USC_VALOUEV|NC_000002.11:g.204738919G>Afwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc11/17/1611/17/16150Genomicunknown
ss2238400825HUMAN_LONGEVITY|HLI-2-203874196-G-Afwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc11/18/1611/18/16150Genomicunknown
ss2404846997TOPMED|2_204738919_G/Afwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc11/19/1611/19/16150Genomicunknown
ss2633728513ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_SoL-rs3087243-131_B_R_2131fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc02/02/1702/02/17151Genomicunknown
ss2633728514ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs3087243-131_B_R_19088522fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc02/02/1702/02/17151Genomicunknown
ss2633728515ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_seq-rs3087243-131_B_R_2130fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc02/02/1702/02/17151Genomicunknown
ss2635100164ILLUMINA|Cancer_BeadChip_11459870_A_rs3087243-128_B_R_1777171197fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc02/02/1702/02/17151Genomicunknown
ss2703811296GRF|rs3087243fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc02/13/1702/13/17151Genomicunknown
ss2785312496GNOMAD|rs3087243fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/17/1705/17/17151Genomicunknown
ss2985197275AFFY|Axiom_PsorMich_Affx-18866057fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/24/1705/24/17151Genomicunknown
ss2985817626AFFY|Axiom_Smokesc1_Affx-18866057fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/24/1705/24/17151Genomicunknown
ss2991212392SWEGEN|NC_000002.11:g.204738919G>Afwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc05/30/1705/30/17151Genomicunknown
ss3022060080ILLUMINA|MEGA_Consortium_v2_15070954_A2_exm-rs3087243-131_B_R_1990482214fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc06/28/1706/28/17151Genomicunknown
ss3024308049BIOINF_KMB_FNS_UNIBA|2.203874196G>Afwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc07/05/1707/05/17151Genomicunknown
ss3336048684TOPMED|TOPMed_freeze_5?chr2:203,874,196fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc10/02/1710/02/17151Genomicunknown
ss3344699714CSHL|rs3087243fwd/A/Gtcttcaccactatttgggatataactgggttaacacagacatagcagtcc10/02/1710/02/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs3087243|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='A/G'|mol=Genomic|build=151
 CTTGACAGAA CACTGTCTTG AAGACAATGG CTTACTCCAG GAGACCCACA GGTATGACCT
 TCTAGGAAGC TCCAGTTCGA TGGGCCCAAT TCTTACAAAC ATGTGGTTAA TGCCATGGAC
 AGAAGAAGGC AGCAGGTGGC AGAATGGGGT GCATGAAGGT TTCTGAAAAT TAACACTGCT
 TGTGTTTTTA ACTCAATATT TTCCATGAAA ATGCAACAAC ATGTATAATA TTTTTAATTA
 AATAAAAATC TGTGGTGGTC GTTTTCCGGA GTTGTCTTTA TCATCCTTGC ATTTGAATAT
 TGTGTTCAAA TTTTTGATTG ATTCATTCAG TATCTGGTGG AGTCTCCAAT ATTAGAAATA
 CTGGAAACAA ACTGAAAAAC CACAAAAGGA CAAATAATGC TTCATGAGTC AGCTTTGCAC
 CAGCCATTAC CTGCAAGTCA TTCTTGGAAG GTATCCATCC TCTTTCCTTT TGATTTCTTC
 ACCACTATTT GGGATATAAC
 R
 TGGGTTAACA CAGACATAGC AGTCCTTTAT AAATCAATTG GCATGCTGTT TAACACAGGT
 TCTTCACCTC CCCTTTCTTA CCGCCTGCTT TCTCAGCTCA ACTATCACAG GCATTACAGT
 TGTCATGGCA ACCCCAATGT TGGCAACCAC GTCCCTTGCA GCCATTTTGA TCTGCCTTCC
 TGAAATATAG AGCTTTTCCC TGTGGCTTCC AAATGAACTA TTTTGCAAAT GTGGGGAAAA
 CACACACCTG TGGTCCTATG TTGCTATCAG CTGGCACACC TAGGCCTGGC ACACTAAGCC
 CTCTGTGATT CTTGCTTAAC CAATGTATAG TCTCAGCACA TTTGGTTTCC ACTTAAGGTT
 TCCTATTTTT GACCTCCACA TCCTGTTATT GTCTTTTGCA GTGATTCTCA GTGTGGTCAG
 GGACCACCTG TAACTGAATC CACTGGGTCA CTTACTAAAA ACACCAATTC ACACTTATTC
 CCAGATGCGT TGAATCAGAA

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
gi|12728608 ABBA01062619
dbSNP Blast Analysis
OMIM
123890.0002

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceA/A
A/G
G/G
HWPA
G
ss1301286360EAS 1008AF 0.262899990.73710001
EUR 1006AF 0.470200000.52980000
AFR 1322AF 0.176200000.82380003
AMR 694AF 0.380399970.61960000
SAS 978AF 0.626800000.37320000
ss139927002ENSEMBL_Venter 2IG 1.00000000 0.500000000.50000000
ss165840550CEUEuropean 2IG 1.00000000 0.500000000.50000000
ss201621694BANTU 2IG 1.00000000 0.500000000.50000000
ss219762014pilot_1_YRI_low_coverage_panel 118AF 0.177966100.82203388
ss231550392pilot_1_CEU_low_coverage_panel 120AF 0.491666670.50833333
ss239019961pilot_1_CHB+JPT_low_coverage_panel 120AF 0.258333330.74166667
ss44315036HapMap-CEUEuropean 226IG0.203539820.513274310.283185840.751830000.460177000.53982300
HapMap-HCBAsian 86IG0.069767450.279069780.651162800.317310000.209302320.79069769
HapMap-JPTAsian 172IG0.046511630.453488380.500000000.200325000.273255830.72674417
HapMap-YRISub-Saharan African 226IG0.026548670.309734520.663716790.654721000.181415930.81858408
7 881AF 0.500000000.50000000
HAPMAP-ASW 98IG0.061224490.326530610.612244900.751830000.224489790.77551019
HAPMAP-CHBAsian 82IG 0.365853670.634146330.438578000.182926830.81707317
HAPMAP-CHD 170IG0.047058820.376470600.576470610.751830000.235294120.76470590
HAPMAP-GIH 176IG0.420454530.465909090.113636371.000000000.653409060.34659091
HAPMAP-LWK 180IG 0.233333330.766666650.583882000.116666670.88333333
HAPMAP-MEX 100IG0.140000000.500000000.360000010.751830000.389999990.61000001
HAPMAP-MKK 286IG0.041958040.209790210.748251740.099721000.146853150.85314685
HAPMAP-TSI 176IG0.284090910.477272720.238636360.751830000.522727250.47727272
ss48293461P1 198AF0.242000000.323000010.434999970.002501000.404000010.59600002
CAUC1 60AF0.367000010.400000010.233000000.317310000.566999970.43300003
AFR1 46AF0.043000000.260999980.695999980.751830000.173999990.82599998
HISP1 46AF0.303999990.347999990.347999990.150222000.477999990.52200001
PAC1 46AF0.216999990.260999980.522000010.050043000.347999990.65200001
ss66079983HapMap-CEUEuropean 118IG0.203389820.508474590.288135591.000000000.457627120.54237288
HapMap-HCBAsian 90IG0.066666670.288888900.644444470.402784000.211111110.78888887
HapMap-JPTAsian 90IG0.088888890.400000010.511111141.000000000.288888900.71111113
HapMap-YRISub-Saharan African 120IG0.016666670.349999990.633333330.317310000.191666660.80833334
ss76019754ICMHP 6IG0.666666690.33333334 0.833333310.16666667
ss97114049J. Craig Venter 2IG 1.00000000 0.500000000.50000000

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
0.466+/-0.1260000

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqbySubmitterWith1000GenomeData
Validated by: PERLEGEN
UNKNOWNUNKNOWNUNKNOWN

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