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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10262453

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr7:33216427 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.269957 (71455/264690, TOPMED)
C=0.310955 (44665/143638, ALFA)
C=0.270147 (37840/140072, GnomAD) (+ 19 more)
C=0.23978 (18869/78694, PAGE_STUDY)
C=0.06894 (1948/28258, 14KJPN)
C=0.07041 (1180/16758, 8.3KJPN)
C=0.2061 (1320/6404, 1000G_30x)
C=0.1985 (994/5008, 1000G)
C=0.2795 (1252/4480, Estonian)
C=0.3041 (1172/3854, ALSPAC)
C=0.3150 (1168/3708, TWINSUK)
C=0.0198 (58/2930, KOREAN)
C=0.0197 (36/1832, Korea1K)
C=0.296 (295/998, GoNL)
C=0.027 (21/792, PRJEB37584)
C=0.288 (173/600, NorthernSweden)
C=0.156 (50/320, HapMap)
C=0.259 (56/216, Qatari)
A=0.384 (73/190, SGDP_PRJ)
C=0.42 (20/48, Ancient Sardinia)
C=0.45 (18/40, GENOME_DK)
A=0.44 (8/18, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
BBS9 : Intron Variant
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 143638 A=0.689045 C=0.310955
European Sub 123452 A=0.685797 C=0.314203
African Sub 5968 A=0.8298 C=0.1702
African Others Sub 208 A=0.875 C=0.125
African American Sub 5760 A=0.8281 C=0.1719
Asian Sub 656 A=0.966 C=0.034
East Asian Sub 524 A=0.962 C=0.038
Other Asian Sub 132 A=0.985 C=0.015
Latin American 1 Sub 738 A=0.715 C=0.285
Latin American 2 Sub 6272 A=0.5582 C=0.4418
South Asian Sub 190 A=0.826 C=0.174
Other Sub 6362 A=0.7133 C=0.2867


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.730043 C=0.269957
Allele Frequency Aggregator Total Global 143638 A=0.689045 C=0.310955
Allele Frequency Aggregator European Sub 123452 A=0.685797 C=0.314203
Allele Frequency Aggregator Other Sub 6362 A=0.7133 C=0.2867
Allele Frequency Aggregator Latin American 2 Sub 6272 A=0.5582 C=0.4418
Allele Frequency Aggregator African Sub 5968 A=0.8298 C=0.1702
Allele Frequency Aggregator Latin American 1 Sub 738 A=0.715 C=0.285
Allele Frequency Aggregator Asian Sub 656 A=0.966 C=0.034
Allele Frequency Aggregator South Asian Sub 190 A=0.826 C=0.174
gnomAD - Genomes Global Study-wide 140072 A=0.729853 C=0.270147
gnomAD - Genomes European Sub 75864 A=0.68884 C=0.31116
gnomAD - Genomes African Sub 41980 A=0.83242 C=0.16758
gnomAD - Genomes American Sub 13632 A=0.58165 C=0.41835
gnomAD - Genomes Ashkenazi Jewish Sub 3320 A=0.7569 C=0.2431
gnomAD - Genomes East Asian Sub 3130 A=0.9760 C=0.0240
gnomAD - Genomes Other Sub 2146 A=0.7139 C=0.2861
The PAGE Study Global Study-wide 78694 A=0.76022 C=0.23978
The PAGE Study AfricanAmerican Sub 32514 A=0.83087 C=0.16913
The PAGE Study Mexican Sub 10810 A=0.56623 C=0.43377
The PAGE Study Asian Sub 8318 A=0.9336 C=0.0664
The PAGE Study PuertoRican Sub 7918 A=0.6691 C=0.3309
The PAGE Study NativeHawaiian Sub 4534 A=0.9012 C=0.0988
The PAGE Study Cuban Sub 4230 A=0.6863 C=0.3137
The PAGE Study Dominican Sub 3826 A=0.7290 C=0.2710
The PAGE Study CentralAmerican Sub 2448 A=0.5425 C=0.4575
The PAGE Study SouthAmerican Sub 1980 A=0.5141 C=0.4859
The PAGE Study NativeAmerican Sub 1260 A=0.6675 C=0.3325
The PAGE Study SouthAsian Sub 856 A=0.771 C=0.229
14KJPN JAPANESE Study-wide 28258 A=0.93106 C=0.06894
8.3KJPN JAPANESE Study-wide 16758 A=0.92959 C=0.07041
1000Genomes_30x Global Study-wide 6404 A=0.7939 C=0.2061
1000Genomes_30x African Sub 1786 A=0.8679 C=0.1321
1000Genomes_30x Europe Sub 1266 A=0.6738 C=0.3262
1000Genomes_30x South Asian Sub 1202 A=0.8070 C=0.1930
1000Genomes_30x East Asian Sub 1170 A=0.9632 C=0.0368
1000Genomes_30x American Sub 980 A=0.596 C=0.404
1000Genomes Global Study-wide 5008 A=0.8015 C=0.1985
1000Genomes African Sub 1322 A=0.8744 C=0.1256
1000Genomes East Asian Sub 1008 A=0.9613 C=0.0387
1000Genomes Europe Sub 1006 A=0.6769 C=0.3231
1000Genomes South Asian Sub 978 A=0.809 C=0.191
1000Genomes American Sub 694 A=0.601 C=0.399
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.7205 C=0.2795
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.6959 C=0.3041
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.6850 C=0.3150
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.9802 C=0.0198
Korean Genome Project KOREAN Study-wide 1832 A=0.9803 C=0.0197
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.704 C=0.296
CNV burdens in cranial meningiomas Global Study-wide 792 A=0.973 C=0.027
CNV burdens in cranial meningiomas CRM Sub 792 A=0.973 C=0.027
Northern Sweden ACPOP Study-wide 600 A=0.712 C=0.288
HapMap Global Study-wide 320 A=0.844 C=0.156
HapMap African Sub 118 A=0.890 C=0.110
HapMap American Sub 114 A=0.711 C=0.289
HapMap Asian Sub 88 A=0.95 C=0.05
Qatari Global Study-wide 216 A=0.741 C=0.259
SGDP_PRJ Global Study-wide 190 A=0.384 C=0.616
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 48 A=0.58 C=0.42
The Danish reference pan genome Danish Study-wide 40 A=0.55 C=0.45
Siberian Global Study-wide 18 A=0.44 C=0.56
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 7 NC_000007.14:g.33216427A>C
GRCh37.p13 chr 7 NC_000007.13:g.33256039A>C
BBS9 RefSeqGene NG_009306.2:g.92184A>C
Gene: BBS9, Bardet-Biedl syndrome 9 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
BBS9 transcript variant 3 NM_001033604.2:c.442+3883…

NM_001033604.2:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant 4 NM_001033605.2:c.442+3883…

NM_001033605.2:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant 5 NM_001348036.1:c.442+3883…

NM_001348036.1:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant 6 NM_001348037.3:c.76+38836…

NM_001348037.3:c.76+38836A>C

N/A Intron Variant
BBS9 transcript variant 7 NM_001348038.3:c.169+3883…

NM_001348038.3:c.169+38836A>C

N/A Intron Variant
BBS9 transcript variant 8 NM_001348039.3:c.169+3883…

NM_001348039.3:c.169+38836A>C

N/A Intron Variant
BBS9 transcript variant 9 NM_001348040.3:c.442+3883…

NM_001348040.3:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant 10 NM_001348041.4:c.442+3883…

NM_001348041.4:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant 11 NM_001348042.3:c.307+3883…

NM_001348042.3:c.307+38836A>C

N/A Intron Variant
BBS9 transcript variant 12 NM_001348043.3:c.442+3883…

NM_001348043.3:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant 13 NM_001348044.3:c.76+38836…

NM_001348044.3:c.76+38836A>C

N/A Intron Variant
BBS9 transcript variant 14 NM_001348045.3:c.76+38836…

NM_001348045.3:c.76+38836A>C

N/A Intron Variant
BBS9 transcript variant 15 NM_001348046.3:c.76+38836…

NM_001348046.3:c.76+38836A>C

N/A Intron Variant
BBS9 transcript variant 19 NM_001362679.1:c.442+3883…

NM_001362679.1:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant 1 NM_014451.4:c.442+38836A>C N/A Intron Variant
BBS9 transcript variant 2 NM_198428.3:c.442+38836A>C N/A Intron Variant
BBS9 transcript variant 16 NR_145411.1:n. N/A Intron Variant
BBS9 transcript variant 17 NR_145412.1:n. N/A Intron Variant
BBS9 transcript variant 18 NR_145413.3:n. N/A Intron Variant
BBS9 transcript variant X11 XM_005249701.4:c.442+3883…

XM_005249701.4:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X1 XM_011515265.3:c.442+3883…

XM_011515265.3:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X2 XM_011515266.4:c.442+3883…

XM_011515266.4:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X6 XM_011515267.4:c.442+3883…

XM_011515267.4:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X9 XM_011515269.3:c.169+3883…

XM_011515269.3:c.169+38836A>C

N/A Intron Variant
BBS9 transcript variant X10 XM_011515270.4:c.442+3883…

XM_011515270.4:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X3 XM_017011990.2:c.442+3883…

XM_017011990.2:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X12 XM_017011994.3:c.442+3883…

XM_017011994.3:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X4 XM_047420201.1:c.442+3883…

XM_047420201.1:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X5 XM_047420202.1:c.442+3883…

XM_047420202.1:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X7 XM_047420203.1:c.442+3883…

XM_047420203.1:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X8 XM_047420204.1:c.442+3883…

XM_047420204.1:c.442+38836A>C

N/A Intron Variant
BBS9 transcript variant X13 XR_001744634.3:n. N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C
GRCh38.p14 chr 7 NC_000007.14:g.33216427= NC_000007.14:g.33216427A>C
GRCh37.p13 chr 7 NC_000007.13:g.33256039= NC_000007.13:g.33256039A>C
BBS9 RefSeqGene NG_009306.2:g.92184= NG_009306.2:g.92184A>C
BBS9 transcript variant 3 NM_001033604.1:c.442+38836= NM_001033604.1:c.442+38836A>C
BBS9 transcript variant 3 NM_001033604.2:c.442+38836= NM_001033604.2:c.442+38836A>C
BBS9 transcript variant 4 NM_001033605.1:c.442+38836= NM_001033605.1:c.442+38836A>C
BBS9 transcript variant 4 NM_001033605.2:c.442+38836= NM_001033605.2:c.442+38836A>C
BBS9 transcript variant 5 NM_001348036.1:c.442+38836= NM_001348036.1:c.442+38836A>C
BBS9 transcript variant 6 NM_001348037.3:c.76+38836= NM_001348037.3:c.76+38836A>C
BBS9 transcript variant 7 NM_001348038.3:c.169+38836= NM_001348038.3:c.169+38836A>C
BBS9 transcript variant 8 NM_001348039.3:c.169+38836= NM_001348039.3:c.169+38836A>C
BBS9 transcript variant 9 NM_001348040.3:c.442+38836= NM_001348040.3:c.442+38836A>C
BBS9 transcript variant 10 NM_001348041.4:c.442+38836= NM_001348041.4:c.442+38836A>C
BBS9 transcript variant 11 NM_001348042.3:c.307+38836= NM_001348042.3:c.307+38836A>C
BBS9 transcript variant 12 NM_001348043.3:c.442+38836= NM_001348043.3:c.442+38836A>C
BBS9 transcript variant 13 NM_001348044.3:c.76+38836= NM_001348044.3:c.76+38836A>C
BBS9 transcript variant 14 NM_001348045.3:c.76+38836= NM_001348045.3:c.76+38836A>C
BBS9 transcript variant 15 NM_001348046.3:c.76+38836= NM_001348046.3:c.76+38836A>C
BBS9 transcript variant 19 NM_001362679.1:c.442+38836= NM_001362679.1:c.442+38836A>C
BBS9 transcript variant 1 NM_014451.3:c.442+38836= NM_014451.3:c.442+38836A>C
BBS9 transcript variant 1 NM_014451.4:c.442+38836= NM_014451.4:c.442+38836A>C
BBS9 transcript variant 2 NM_198428.2:c.442+38836= NM_198428.2:c.442+38836A>C
BBS9 transcript variant 2 NM_198428.3:c.442+38836= NM_198428.3:c.442+38836A>C
BBS9 transcript variant X1 XM_005249700.1:c.442+38836= XM_005249700.1:c.442+38836A>C
BBS9 transcript variant X9 XM_005249701.1:c.442+38836= XM_005249701.1:c.442+38836A>C
BBS9 transcript variant X11 XM_005249701.4:c.442+38836= XM_005249701.4:c.442+38836A>C
BBS9 transcript variant X1 XM_011515265.3:c.442+38836= XM_011515265.3:c.442+38836A>C
BBS9 transcript variant X2 XM_011515266.4:c.442+38836= XM_011515266.4:c.442+38836A>C
BBS9 transcript variant X6 XM_011515267.4:c.442+38836= XM_011515267.4:c.442+38836A>C
BBS9 transcript variant X9 XM_011515269.3:c.169+38836= XM_011515269.3:c.169+38836A>C
BBS9 transcript variant X10 XM_011515270.4:c.442+38836= XM_011515270.4:c.442+38836A>C
BBS9 transcript variant X3 XM_017011990.2:c.442+38836= XM_017011990.2:c.442+38836A>C
BBS9 transcript variant X12 XM_017011994.3:c.442+38836= XM_017011994.3:c.442+38836A>C
BBS9 transcript variant X4 XM_047420201.1:c.442+38836= XM_047420201.1:c.442+38836A>C
BBS9 transcript variant X5 XM_047420202.1:c.442+38836= XM_047420202.1:c.442+38836A>C
BBS9 transcript variant X7 XM_047420203.1:c.442+38836= XM_047420203.1:c.442+38836A>C
BBS9 transcript variant X8 XM_047420204.1:c.442+38836= XM_047420204.1:c.442+38836A>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

98 SubSNP, 22 Frequency submissions
No Submitter Submission ID Date (Build)
1 WUGSC_SSAHASNP ss14132267 Dec 05, 2003 (119)
2 PERLEGEN ss24446835 Sep 20, 2004 (123)
3 CSHL-HAPMAP ss68422598 Jan 12, 2007 (127)
4 BCMHGSC_JDW ss93657235 Mar 24, 2008 (129)
5 1000GENOMES ss111785382 Jan 25, 2009 (130)
6 ENSEMBL ss142826141 Dec 01, 2009 (131)
7 ILLUMINA ss159884472 Dec 01, 2009 (131)
8 1000GENOMES ss212019678 Jul 14, 2010 (132)
9 1000GENOMES ss223002086 Jul 14, 2010 (132)
10 1000GENOMES ss233919540 Jul 15, 2010 (132)
11 1000GENOMES ss240885495 Jul 15, 2010 (132)
12 GMI ss285602733 Apr 25, 2013 (138)
13 PJP ss294044026 May 09, 2011 (134)
14 ILLUMINA ss479242061 May 04, 2012 (137)
15 ILLUMINA ss479244745 May 04, 2012 (137)
16 ILLUMINA ss479603790 Sep 08, 2015 (146)
17 ILLUMINA ss484421736 May 04, 2012 (137)
18 ILLUMINA ss536596294 Sep 08, 2015 (146)
19 TISHKOFF ss559915358 Apr 25, 2013 (138)
20 SSMP ss654270123 Apr 25, 2013 (138)
21 ILLUMINA ss778686802 Aug 21, 2014 (142)
22 ILLUMINA ss782657328 Aug 21, 2014 (142)
23 ILLUMINA ss783626439 Aug 21, 2014 (142)
24 ILLUMINA ss831907762 Apr 01, 2015 (144)
25 ILLUMINA ss834145468 Aug 21, 2014 (142)
26 EVA-GONL ss984129353 Aug 21, 2014 (142)
27 JMKIDD_LAB ss1074498279 Aug 21, 2014 (142)
28 1000GENOMES ss1324580889 Aug 21, 2014 (142)
29 DDI ss1431080178 Apr 01, 2015 (144)
30 EVA_GENOME_DK ss1582142174 Apr 01, 2015 (144)
31 EVA_DECODE ss1593700647 Apr 01, 2015 (144)
32 EVA_UK10K_ALSPAC ss1617920346 Apr 01, 2015 (144)
33 EVA_UK10K_TWINSUK ss1660914379 Apr 01, 2015 (144)
34 ILLUMINA ss1752682950 Sep 08, 2015 (146)
35 WEILL_CORNELL_DGM ss1927373625 Feb 12, 2016 (147)
36 ILLUMINA ss1959001882 Feb 12, 2016 (147)
37 GENOMED ss1970666524 Jul 19, 2016 (147)
38 JJLAB ss2024366644 Sep 14, 2016 (149)
39 USC_VALOUEV ss2152562197 Dec 20, 2016 (150)
40 HUMAN_LONGEVITY ss2292990189 Dec 20, 2016 (150)
41 ILLUMINA ss2634589841 Nov 08, 2017 (151)
42 ILLUMINA ss2635171445 Nov 08, 2017 (151)
43 GRF ss2708221209 Nov 08, 2017 (151)
44 GNOMAD ss2851594627 Nov 08, 2017 (151)
45 AFFY ss2986035486 Nov 08, 2017 (151)
46 SWEGEN ss3000892243 Nov 08, 2017 (151)
47 ILLUMINA ss3022724016 Nov 08, 2017 (151)
48 BIOINF_KMB_FNS_UNIBA ss3025977772 Nov 08, 2017 (151)
49 CSHL ss3347517744 Nov 08, 2017 (151)
50 ILLUMINA ss3629788603 Oct 12, 2018 (152)
51 ILLUMINA ss3632498128 Oct 12, 2018 (152)
52 ILLUMINA ss3633458899 Oct 12, 2018 (152)
53 ILLUMINA ss3634183601 Oct 12, 2018 (152)
54 ILLUMINA ss3635115856 Oct 12, 2018 (152)
55 ILLUMINA ss3635863524 Oct 12, 2018 (152)
56 ILLUMINA ss3636847459 Oct 12, 2018 (152)
57 ILLUMINA ss3637616474 Oct 12, 2018 (152)
58 ILLUMINA ss3640823152 Oct 12, 2018 (152)
59 ILLUMINA ss3653253967 Oct 12, 2018 (152)
60 EGCUT_WGS ss3668818212 Jul 13, 2019 (153)
61 EVA_DECODE ss3719422872 Jul 13, 2019 (153)
62 ILLUMINA ss3726434687 Jul 13, 2019 (153)
63 ACPOP ss3734506052 Jul 13, 2019 (153)
64 ILLUMINA ss3745415807 Jul 13, 2019 (153)
65 EVA ss3766390279 Jul 13, 2019 (153)
66 PAGE_CC ss3771362525 Jul 13, 2019 (153)
67 ILLUMINA ss3772908890 Jul 13, 2019 (153)
68 KHV_HUMAN_GENOMES ss3809556320 Jul 13, 2019 (153)
69 EVA ss3830501884 Apr 26, 2020 (154)
70 EVA ss3838739294 Apr 26, 2020 (154)
71 EVA ss3844190864 Apr 26, 2020 (154)
72 SGDP_PRJ ss3866979817 Apr 26, 2020 (154)
73 KRGDB ss3914027319 Apr 26, 2020 (154)
74 KOGIC ss3961196303 Apr 26, 2020 (154)
75 EVA ss3984586216 Apr 26, 2021 (155)
76 EVA ss3985288372 Apr 26, 2021 (155)
77 EVA ss4017329549 Apr 26, 2021 (155)
78 TOPMED ss4741222832 Apr 26, 2021 (155)
79 TOMMO_GENOMICS ss5182535882 Apr 26, 2021 (155)
80 EVA ss5237418776 Apr 26, 2021 (155)
81 1000G_HIGH_COVERAGE ss5272398415 Oct 14, 2022 (156)
82 EVA ss5315238511 Oct 14, 2022 (156)
83 EVA ss5372684863 Oct 14, 2022 (156)
84 HUGCELL_USP ss5469625460 Oct 14, 2022 (156)
85 EVA ss5508907004 Oct 14, 2022 (156)
86 1000G_HIGH_COVERAGE ss5560324741 Oct 14, 2022 (156)
87 SANFORD_IMAGENETICS ss5624659725 Oct 14, 2022 (156)
88 SANFORD_IMAGENETICS ss5642673881 Oct 14, 2022 (156)
89 TOMMO_GENOMICS ss5722194192 Oct 14, 2022 (156)
90 EVA ss5799721036 Oct 14, 2022 (156)
91 YY_MCH ss5808479624 Oct 14, 2022 (156)
92 EVA ss5822632672 Oct 14, 2022 (156)
93 EVA ss5847315903 Oct 14, 2022 (156)
94 EVA ss5848134052 Oct 14, 2022 (156)
95 EVA ss5855835319 Oct 14, 2022 (156)
96 EVA ss5858359353 Oct 14, 2022 (156)
97 EVA ss5971880307 Oct 14, 2022 (156)
98 EVA ss5979822400 Oct 14, 2022 (156)
99 1000Genomes NC_000007.13 - 33256039 Oct 12, 2018 (152)
100 1000Genomes_30x NC_000007.14 - 33216427 Oct 14, 2022 (156)
101 The Avon Longitudinal Study of Parents and Children NC_000007.13 - 33256039 Oct 12, 2018 (152)
102 Genetic variation in the Estonian population NC_000007.13 - 33256039 Oct 12, 2018 (152)
103 The Danish reference pan genome NC_000007.13 - 33256039 Apr 26, 2020 (154)
104 gnomAD - Genomes NC_000007.14 - 33216427 Apr 26, 2021 (155)
105 Genome of the Netherlands Release 5 NC_000007.13 - 33256039 Apr 26, 2020 (154)
106 HapMap NC_000007.14 - 33216427 Apr 26, 2020 (154)
107 KOREAN population from KRGDB NC_000007.13 - 33256039 Apr 26, 2020 (154)
108 Korean Genome Project NC_000007.14 - 33216427 Apr 26, 2020 (154)
109 Northern Sweden NC_000007.13 - 33256039 Jul 13, 2019 (153)
110 The PAGE Study NC_000007.14 - 33216427 Jul 13, 2019 (153)
111 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000007.13 - 33256039 Apr 26, 2021 (155)
112 CNV burdens in cranial meningiomas NC_000007.13 - 33256039 Apr 26, 2021 (155)
113 Qatari NC_000007.13 - 33256039 Apr 26, 2020 (154)
114 SGDP_PRJ NC_000007.13 - 33256039 Apr 26, 2020 (154)
115 Siberian NC_000007.13 - 33256039 Apr 26, 2020 (154)
116 8.3KJPN NC_000007.13 - 33256039 Apr 26, 2021 (155)
117 14KJPN NC_000007.14 - 33216427 Oct 14, 2022 (156)
118 TopMed NC_000007.14 - 33216427 Apr 26, 2021 (155)
119 UK 10K study - Twins NC_000007.13 - 33256039 Oct 12, 2018 (152)
120 ALFA NC_000007.14 - 33216427 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17474768 Oct 08, 2004 (123)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss93657235, ss111785382, ss159884472, ss212019678, ss285602733, ss294044026, ss479242061, ss1593700647, ss2635171445 NC_000007.12:33222563:A:C NC_000007.14:33216426:A:C (self)
36531663, 20369167, 14556460, 8307113, 9083261, 21204713, 7790917, 514299, 135637, 9415555, 18996797, 5078551, 40505189, 20369167, ss223002086, ss233919540, ss240885495, ss479244745, ss479603790, ss484421736, ss536596294, ss559915358, ss654270123, ss778686802, ss782657328, ss783626439, ss831907762, ss834145468, ss984129353, ss1074498279, ss1324580889, ss1431080178, ss1582142174, ss1617920346, ss1660914379, ss1752682950, ss1927373625, ss1959001882, ss1970666524, ss2024366644, ss2152562197, ss2634589841, ss2708221209, ss2851594627, ss2986035486, ss3000892243, ss3022724016, ss3347517744, ss3629788603, ss3632498128, ss3633458899, ss3634183601, ss3635115856, ss3635863524, ss3636847459, ss3637616474, ss3640823152, ss3653253967, ss3668818212, ss3734506052, ss3745415807, ss3766390279, ss3772908890, ss3830501884, ss3838739294, ss3866979817, ss3914027319, ss3984586216, ss3985288372, ss4017329549, ss5182535882, ss5237418776, ss5315238511, ss5372684863, ss5508907004, ss5624659725, ss5642673881, ss5799721036, ss5822632672, ss5847315903, ss5848134052, ss5971880307, ss5979822400 NC_000007.13:33256038:A:C NC_000007.14:33216426:A:C (self)
47850676, 257566005, 3373538, 17574304, 583994, 56031296, 578600391, 12542761031, ss2292990189, ss3025977772, ss3719422872, ss3726434687, ss3771362525, ss3809556320, ss3844190864, ss3961196303, ss4741222832, ss5272398415, ss5469625460, ss5560324741, ss5722194192, ss5808479624, ss5855835319, ss5858359353 NC_000007.14:33216426:A:C NC_000007.14:33216426:A:C (self)
ss14132267 NT_007819.14:32549591:A:C NC_000007.14:33216426:A:C (self)
ss24446835, ss68422598, ss142826141 NT_007819.17:33246038:A:C NC_000007.14:33216426:A:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs10262453
PMID Title Author Year Journal
23160099 A genome-wide association study identifies susceptibility loci for nonsyndromic sagittal craniosynostosis near BMP2 and within BBS9. Justice CM et al. 2012 Nature genetics
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07