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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2247572

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr8:72720793 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
T=0.143452 (49222/343126, ALFA)
T=0.211530 (55990/264690, TOPMED)
T=0.209180 (29294/140042, GnomAD) (+ 20 more)
T=0.26191 (20611/78696, PAGE_STUDY)
T=0.24878 (7030/28258, 14KJPN)
T=0.24791 (4155/16760, 8.3KJPN)
T=0.2580 (1292/5008, 1000G)
T=0.1435 (643/4480, Estonian)
T=0.1266 (488/3854, ALSPAC)
T=0.1305 (484/3708, TWINSUK)
T=0.2215 (649/2930, KOREAN)
T=0.2279 (475/2084, HGDP_Stanford)
T=0.2900 (547/1886, HapMap)
T=0.2265 (415/1832, Korea1K)
T=0.2465 (280/1136, Daghestan)
T=0.120 (120/998, GoNL)
T=0.133 (80/600, NorthernSweden)
T=0.176 (38/216, Qatari)
C=0.410 (87/212, SGDP_PRJ)
T=0.165 (35/212, Vietnamese)
T=0.05 (2/40, GENOME_DK)
T=0.15 (6/40, Ancient Sardinia)
C=0.38 (13/34, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
KCNB2 : Intron Variant
Publications
2 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 348378 C=0.855855 T=0.144145
European Sub 298680 C=0.870637 T=0.129363
African Sub 12240 C=0.63088 T=0.36912
African Others Sub 456 C=0.557 T=0.443
African American Sub 11784 C=0.63374 T=0.36626
Asian Sub 6914 C=0.7809 T=0.2191
East Asian Sub 4976 C=0.7719 T=0.2281
Other Asian Sub 1938 C=0.8039 T=0.1961
Latin American 1 Sub 1132 C=0.7915 T=0.2085
Latin American 2 Sub 7208 C=0.8492 T=0.1508
South Asian Sub 5226 C=0.7403 T=0.2597
Other Sub 16978 C=0.83119 T=0.16881


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 343126 C=0.856548 T=0.143452
Allele Frequency Aggregator European Sub 295406 C=0.870615 T=0.129385
Allele Frequency Aggregator Other Sub 16156 C=0.83177 T=0.16823
Allele Frequency Aggregator African Sub 11084 C=0.63118 T=0.36882
Allele Frequency Aggregator Latin American 2 Sub 7208 C=0.8492 T=0.1508
Allele Frequency Aggregator Asian Sub 6914 C=0.7809 T=0.2191
Allele Frequency Aggregator South Asian Sub 5226 C=0.7403 T=0.2597
Allele Frequency Aggregator Latin American 1 Sub 1132 C=0.7915 T=0.2085
TopMed Global Study-wide 264690 C=0.788470 T=0.211530
gnomAD - Genomes Global Study-wide 140042 C=0.790820 T=0.209180
gnomAD - Genomes European Sub 75876 C=0.86318 T=0.13682
gnomAD - Genomes African Sub 41926 C=0.63264 T=0.36736
gnomAD - Genomes American Sub 13640 C=0.86518 T=0.13482
gnomAD - Genomes Ashkenazi Jewish Sub 3322 C=0.8326 T=0.1674
gnomAD - Genomes East Asian Sub 3124 C=0.7772 T=0.2228
gnomAD - Genomes Other Sub 2154 C=0.8050 T=0.1950
The PAGE Study Global Study-wide 78696 C=0.73809 T=0.26191
The PAGE Study AfricanAmerican Sub 32514 C=0.63739 T=0.36261
The PAGE Study Mexican Sub 10810 C=0.84283 T=0.15717
The PAGE Study Asian Sub 8318 C=0.7627 T=0.2373
The PAGE Study PuertoRican Sub 7916 C=0.8129 T=0.1871
The PAGE Study NativeHawaiian Sub 4534 C=0.7865 T=0.2135
The PAGE Study Cuban Sub 4230 C=0.8430 T=0.1570
The PAGE Study Dominican Sub 3826 C=0.7514 T=0.2486
The PAGE Study CentralAmerican Sub 2450 C=0.8453 T=0.1547
The PAGE Study SouthAmerican Sub 1982 C=0.8819 T=0.1181
The PAGE Study NativeAmerican Sub 1260 C=0.7976 T=0.2024
The PAGE Study SouthAsian Sub 856 C=0.748 T=0.252
14KJPN JAPANESE Study-wide 28258 C=0.75122 T=0.24878
8.3KJPN JAPANESE Study-wide 16760 C=0.75209 T=0.24791
1000Genomes Global Study-wide 5008 C=0.7420 T=0.2580
1000Genomes African Sub 1322 C=0.5469 T=0.4531
1000Genomes East Asian Sub 1008 C=0.7698 T=0.2302
1000Genomes Europe Sub 1006 C=0.8598 T=0.1402
1000Genomes South Asian Sub 978 C=0.762 T=0.238
1000Genomes American Sub 694 C=0.875 T=0.125
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.8565 T=0.1435
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.8734 T=0.1266
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.8695 T=0.1305
KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.7785 T=0.2215
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 C=0.7721 T=0.2279
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 C=0.732 T=0.268
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 C=0.703 T=0.297
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 C=0.829 T=0.171
HGDP-CEPH-db Supplement 1 Europe Sub 320 C=0.878 T=0.122
HGDP-CEPH-db Supplement 1 Africa Sub 242 C=0.587 T=0.413
HGDP-CEPH-db Supplement 1 America Sub 216 C=0.940 T=0.060
HGDP-CEPH-db Supplement 1 Oceania Sub 72 C=0.81 T=0.19
HapMap Global Study-wide 1886 C=0.7100 T=0.2900
HapMap American Sub 768 C=0.755 T=0.245
HapMap African Sub 690 C=0.617 T=0.383
HapMap Asian Sub 254 C=0.740 T=0.260
HapMap Europe Sub 174 C=0.833 T=0.167
Korean Genome Project KOREAN Study-wide 1832 C=0.7735 T=0.2265
Genome-wide autozygosity in Daghestan Global Study-wide 1136 C=0.7535 T=0.2465
Genome-wide autozygosity in Daghestan Daghestan Sub 628 C=0.747 T=0.253
Genome-wide autozygosity in Daghestan Near_East Sub 144 C=0.771 T=0.229
Genome-wide autozygosity in Daghestan Central Asia Sub 122 C=0.730 T=0.270
Genome-wide autozygosity in Daghestan Europe Sub 108 C=0.778 T=0.222
Genome-wide autozygosity in Daghestan South Asian Sub 98 C=0.78 T=0.22
Genome-wide autozygosity in Daghestan Caucasus Sub 36 C=0.75 T=0.25
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.880 T=0.120
Northern Sweden ACPOP Study-wide 600 C=0.867 T=0.133
Qatari Global Study-wide 216 C=0.824 T=0.176
SGDP_PRJ Global Study-wide 212 C=0.410 T=0.590
A Vietnamese Genetic Variation Database Global Study-wide 212 C=0.835 T=0.165
The Danish reference pan genome Danish Study-wide 40 C=0.95 T=0.05
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 40 C=0.85 T=0.15
Siberian Global Study-wide 34 C=0.38 T=0.62
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 8 NC_000008.11:g.72720793C>T
GRCh37.p13 chr 8 NC_000008.10:g.73633028C>T
Gene: KCNB2, potassium voltage-gated channel subfamily B member 2 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
KCNB2 transcript NM_004770.3:c.579+152480C…

NM_004770.3:c.579+152480C>T

N/A Intron Variant
KCNB2 transcript variant X1 XM_017013982.2:c. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= T
GRCh38.p14 chr 8 NC_000008.11:g.72720793= NC_000008.11:g.72720793C>T
GRCh37.p13 chr 8 NC_000008.10:g.73633028= NC_000008.10:g.73633028C>T
KCNB2 transcript NM_004770.2:c.579+152480= NM_004770.2:c.579+152480C>T
KCNB2 transcript NM_004770.3:c.579+152480= NM_004770.3:c.579+152480C>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

141 SubSNP, 23 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_JCM ss3418835 Sep 28, 2001 (100)
2 SC_JCM ss3694728 Sep 28, 2001 (100)
3 ILLUMINA ss66612184 Nov 30, 2006 (127)
4 ILLUMINA ss67237689 Nov 30, 2006 (127)
5 ILLUMINA ss67634039 Nov 30, 2006 (127)
6 ILLUMINA ss70716016 May 26, 2008 (130)
7 ILLUMINA ss71283947 May 17, 2007 (127)
8 ILLUMINA ss75474027 Dec 06, 2007 (129)
9 ILLUMINA ss79123270 Dec 15, 2007 (130)
10 KRIBB_YJKIM ss84008181 Dec 15, 2007 (130)
11 BGI ss104542444 Dec 01, 2009 (131)
12 1000GENOMES ss113211647 Jan 25, 2009 (130)
13 ILLUMINA ss121966229 Dec 01, 2009 (131)
14 ILLUMINA ss153893890 Dec 01, 2009 (131)
15 ILLUMINA ss159372363 Dec 01, 2009 (131)
16 ILLUMINA ss160521561 Dec 01, 2009 (131)
17 COMPLETE_GENOMICS ss162503079 Jul 04, 2010 (132)
18 COMPLETE_GENOMICS ss164978747 Jul 04, 2010 (132)
19 ILLUMINA ss171122276 Jul 04, 2010 (132)
20 ILLUMINA ss173213867 Jul 04, 2010 (132)
21 BUSHMAN ss199324421 Jul 04, 2010 (132)
22 BCM-HGSC-SUB ss208527795 Jul 04, 2010 (132)
23 1000GENOMES ss223777384 Jul 14, 2010 (132)
24 1000GENOMES ss234487688 Jul 15, 2010 (132)
25 1000GENOMES ss241333547 Jul 15, 2010 (132)
26 BL ss254416812 May 09, 2011 (134)
27 GMI ss279862586 May 04, 2012 (137)
28 PJP ss294105637 May 09, 2011 (134)
29 ILLUMINA ss480484662 May 04, 2012 (137)
30 ILLUMINA ss480499044 May 04, 2012 (137)
31 ILLUMINA ss481300541 Sep 08, 2015 (146)
32 ILLUMINA ss485039847 May 04, 2012 (137)
33 EXOME_CHIP ss491414335 May 04, 2012 (137)
34 ILLUMINA ss537061863 Sep 08, 2015 (146)
35 TISHKOFF ss560833604 Apr 25, 2013 (138)
36 SSMP ss655269475 Apr 25, 2013 (138)
37 ILLUMINA ss778487605 Sep 08, 2015 (146)
38 ILLUMINA ss780683169 Sep 08, 2015 (146)
39 ILLUMINA ss782966151 Sep 08, 2015 (146)
40 ILLUMINA ss783356554 Sep 08, 2015 (146)
41 ILLUMINA ss783927960 Sep 08, 2015 (146)
42 ILLUMINA ss825453788 Apr 01, 2015 (144)
43 ILLUMINA ss832222425 Sep 08, 2015 (146)
44 ILLUMINA ss832884181 Jul 13, 2019 (153)
45 ILLUMINA ss833943563 Sep 08, 2015 (146)
46 EVA-GONL ss985659603 Aug 21, 2014 (142)
47 JMKIDD_LAB ss1075626586 Aug 21, 2014 (142)
48 1000GENOMES ss1330410575 Aug 21, 2014 (142)
49 HAMMER_LAB ss1397529316 Sep 08, 2015 (146)
50 DDI ss1431555925 Apr 01, 2015 (144)
51 EVA_GENOME_DK ss1582736971 Apr 01, 2015 (144)
52 EVA_DECODE ss1595259725 Apr 01, 2015 (144)
53 EVA_UK10K_ALSPAC ss1620931599 Apr 01, 2015 (144)
54 EVA_UK10K_TWINSUK ss1663925632 Apr 01, 2015 (144)
55 EVA_SVP ss1713045500 Apr 01, 2015 (144)
56 ILLUMINA ss1752741437 Sep 08, 2015 (146)
57 ILLUMINA ss1752741438 Sep 08, 2015 (146)
58 HAMMER_LAB ss1805594569 Sep 08, 2015 (146)
59 ILLUMINA ss1917829363 Feb 12, 2016 (147)
60 WEILL_CORNELL_DGM ss1928944775 Feb 12, 2016 (147)
61 ILLUMINA ss1946239342 Feb 12, 2016 (147)
62 ILLUMINA ss1946239343 Feb 12, 2016 (147)
63 ILLUMINA ss1959118837 Feb 12, 2016 (147)
64 ILLUMINA ss1959118838 Feb 12, 2016 (147)
65 JJLAB ss2025174605 Sep 14, 2016 (149)
66 USC_VALOUEV ss2153400251 Dec 20, 2016 (150)
67 HUMAN_LONGEVITY ss2304259702 Dec 20, 2016 (150)
68 SYSTEMSBIOZJU ss2627065526 Nov 08, 2017 (151)
69 ILLUMINA ss2634761875 Nov 08, 2017 (151)
70 ILLUMINA ss2634761876 Nov 08, 2017 (151)
71 ILLUMINA ss2634761877 Nov 08, 2017 (151)
72 GRF ss2709173350 Nov 08, 2017 (151)
73 ILLUMINA ss2711140299 Nov 08, 2017 (151)
74 GNOMAD ss2868364973 Nov 08, 2017 (151)
75 AFFY ss2985441394 Nov 08, 2017 (151)
76 AFFY ss2986085024 Nov 08, 2017 (151)
77 SWEGEN ss3003400558 Nov 08, 2017 (151)
78 ILLUMINA ss3022854624 Nov 08, 2017 (151)
79 ILLUMINA ss3022854625 Nov 08, 2017 (151)
80 BIOINF_KMB_FNS_UNIBA ss3026373335 Nov 08, 2017 (151)
81 CSHL ss3348242301 Nov 08, 2017 (151)
82 ILLUMINA ss3625953923 Oct 12, 2018 (152)
83 ILLUMINA ss3630086194 Oct 12, 2018 (152)
84 ILLUMINA ss3630086195 Oct 12, 2018 (152)
85 ILLUMINA ss3632660298 Oct 12, 2018 (152)
86 ILLUMINA ss3633504750 Oct 12, 2018 (152)
87 ILLUMINA ss3634231714 Oct 12, 2018 (152)
88 ILLUMINA ss3635176604 Oct 12, 2018 (152)
89 ILLUMINA ss3635176605 Oct 12, 2018 (152)
90 ILLUMINA ss3635910412 Oct 12, 2018 (152)
91 ILLUMINA ss3636915319 Oct 12, 2018 (152)
92 ILLUMINA ss3637663606 Oct 12, 2018 (152)
93 ILLUMINA ss3638767101 Oct 12, 2018 (152)
94 ILLUMINA ss3639385949 Oct 12, 2018 (152)
95 ILLUMINA ss3639722575 Oct 12, 2018 (152)
96 ILLUMINA ss3640883895 Oct 12, 2018 (152)
97 ILLUMINA ss3640883896 Oct 12, 2018 (152)
98 ILLUMINA ss3643697514 Oct 12, 2018 (152)
99 ILLUMINA ss3644972572 Oct 12, 2018 (152)
100 ILLUMINA ss3644972573 Oct 12, 2018 (152)
101 ILLUMINA ss3653397936 Oct 12, 2018 (152)
102 ILLUMINA ss3653397937 Oct 12, 2018 (152)
103 ILLUMINA ss3654203843 Oct 12, 2018 (152)
104 EGCUT_WGS ss3671090744 Jul 13, 2019 (153)
105 EVA_DECODE ss3722281501 Jul 13, 2019 (153)
106 ILLUMINA ss3726545977 Jul 13, 2019 (153)
107 ACPOP ss3735779892 Jul 13, 2019 (153)
108 ILLUMINA ss3744307604 Jul 13, 2019 (153)
109 ILLUMINA ss3744580945 Jul 13, 2019 (153)
110 ILLUMINA ss3745476473 Jul 13, 2019 (153)
111 ILLUMINA ss3745476474 Jul 13, 2019 (153)
112 EVA ss3768166003 Jul 13, 2019 (153)
113 PAGE_CC ss3771448871 Jul 13, 2019 (153)
114 ILLUMINA ss3772968889 Jul 13, 2019 (153)
115 ILLUMINA ss3772968890 Jul 13, 2019 (153)
116 KHV_HUMAN_GENOMES ss3811322997 Jul 13, 2019 (153)
117 EVA ss3831229646 Apr 26, 2020 (154)
118 EVA ss3839124068 Apr 26, 2020 (154)
119 EVA ss3844584176 Apr 26, 2020 (154)
120 HGDP ss3847917839 Apr 26, 2020 (154)
121 SGDP_PRJ ss3870210894 Apr 26, 2020 (154)
122 KRGDB ss3917743759 Apr 26, 2020 (154)
123 KOGIC ss3964132999 Apr 26, 2020 (154)
124 EVA ss3985367531 Apr 26, 2021 (155)
125 EVA ss4017396699 Apr 26, 2021 (155)
126 TOPMED ss4790997494 Apr 26, 2021 (155)
127 TOMMO_GENOMICS ss5189321047 Apr 26, 2021 (155)
128 1000G_HIGH_COVERAGE ss5277624447 Oct 14, 2022 (156)
129 EVA ss5315340209 Oct 14, 2022 (156)
130 EVA ss5382043252 Oct 14, 2022 (156)
131 HUGCELL_USP ss5474141324 Oct 14, 2022 (156)
132 EVA ss5509404584 Oct 14, 2022 (156)
133 SANFORD_IMAGENETICS ss5624696956 Oct 14, 2022 (156)
134 SANFORD_IMAGENETICS ss5645656882 Oct 14, 2022 (156)
135 TOMMO_GENOMICS ss5731564957 Oct 14, 2022 (156)
136 EVA ss5799759511 Oct 14, 2022 (156)
137 YY_MCH ss5809824682 Oct 14, 2022 (156)
138 EVA ss5830720653 Oct 14, 2022 (156)
139 EVA ss5856426001 Oct 14, 2022 (156)
140 EVA ss5889520265 Oct 14, 2022 (156)
141 EVA ss5974877025 Oct 14, 2022 (156)
142 1000Genomes NC_000008.10 - 73633028 Oct 12, 2018 (152)
143 The Avon Longitudinal Study of Parents and Children NC_000008.10 - 73633028 Oct 12, 2018 (152)
144 Genome-wide autozygosity in Daghestan NC_000008.9 - 73795582 Apr 26, 2020 (154)
145 Genetic variation in the Estonian population NC_000008.10 - 73633028 Oct 12, 2018 (152)
146 The Danish reference pan genome NC_000008.10 - 73633028 Apr 26, 2020 (154)
147 gnomAD - Genomes NC_000008.11 - 72720793 Apr 26, 2021 (155)
148 Genome of the Netherlands Release 5 NC_000008.10 - 73633028 Apr 26, 2020 (154)
149 HGDP-CEPH-db Supplement 1 NC_000008.9 - 73795582 Apr 26, 2020 (154)
150 HapMap NC_000008.11 - 72720793 Apr 26, 2020 (154)
151 KOREAN population from KRGDB NC_000008.10 - 73633028 Apr 26, 2020 (154)
152 Korean Genome Project NC_000008.11 - 72720793 Apr 26, 2020 (154)
153 Northern Sweden NC_000008.10 - 73633028 Jul 13, 2019 (153)
154 The PAGE Study NC_000008.11 - 72720793 Jul 13, 2019 (153)
155 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000008.10 - 73633028 Apr 26, 2021 (155)
156 Qatari NC_000008.10 - 73633028 Apr 26, 2020 (154)
157 SGDP_PRJ NC_000008.10 - 73633028 Apr 26, 2020 (154)
158 Siberian NC_000008.10 - 73633028 Apr 26, 2020 (154)
159 8.3KJPN NC_000008.10 - 73633028 Apr 26, 2021 (155)
160 14KJPN NC_000008.11 - 72720793 Oct 14, 2022 (156)
161 TopMed NC_000008.11 - 72720793 Apr 26, 2021 (155)
162 UK 10K study - Twins NC_000008.10 - 73633028 Oct 12, 2018 (152)
163 A Vietnamese Genetic Variation Database NC_000008.10 - 73633028 Jul 13, 2019 (153)
164 ALFA NC_000008.11 - 72720793 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs60619209 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
503099, 595731, ss113211647, ss162503079, ss164978747, ss199324421, ss208527795, ss254416812, ss279862586, ss294105637, ss480484662, ss825453788, ss1397529316, ss1595259725, ss1713045500, ss3639385949, ss3639722575, ss3643697514, ss3847917839 NC_000008.9:73795581:C:T NC_000008.11:72720792:C:T (self)
42553951, 23667636, 16828992, 8901909, 10564562, 24921153, 9064757, 593458, 10986705, 22227874, 5916605, 47290354, 23667636, 5264134, ss223777384, ss234487688, ss241333547, ss480499044, ss481300541, ss485039847, ss491414335, ss537061863, ss560833604, ss655269475, ss778487605, ss780683169, ss782966151, ss783356554, ss783927960, ss832222425, ss832884181, ss833943563, ss985659603, ss1075626586, ss1330410575, ss1431555925, ss1582736971, ss1620931599, ss1663925632, ss1752741437, ss1752741438, ss1805594569, ss1917829363, ss1928944775, ss1946239342, ss1946239343, ss1959118837, ss1959118838, ss2025174605, ss2153400251, ss2627065526, ss2634761875, ss2634761876, ss2634761877, ss2709173350, ss2711140299, ss2868364973, ss2985441394, ss2986085024, ss3003400558, ss3022854624, ss3022854625, ss3348242301, ss3625953923, ss3630086194, ss3630086195, ss3632660298, ss3633504750, ss3634231714, ss3635176604, ss3635176605, ss3635910412, ss3636915319, ss3637663606, ss3638767101, ss3640883895, ss3640883896, ss3644972572, ss3644972573, ss3653397936, ss3653397937, ss3654203843, ss3671090744, ss3735779892, ss3744307604, ss3744580945, ss3745476473, ss3745476474, ss3768166003, ss3772968889, ss3772968890, ss3831229646, ss3839124068, ss3870210894, ss3917743759, ss3985367531, ss4017396699, ss5189321047, ss5315340209, ss5382043252, ss5509404584, ss5624696956, ss5645656882, ss5799759511, ss5830720653, ss5974877025 NC_000008.10:73633027:C:T NC_000008.11:72720792:C:T (self)
300070528, 3649278, 20511000, 670340, 65402061, 628375054, 1824351633, ss2304259702, ss3026373335, ss3722281501, ss3726545977, ss3771448871, ss3811322997, ss3844584176, ss3964132999, ss4790997494, ss5277624447, ss5474141324, ss5731564957, ss5809824682, ss5856426001, ss5889520265 NC_000008.11:72720792:C:T NC_000008.11:72720792:C:T (self)
ss3418835, ss3694728, ss66612184, ss67237689, ss67634039, ss70716016, ss71283947, ss75474027, ss79123270, ss84008181, ss104542444, ss121966229, ss153893890, ss159372363, ss160521561, ss171122276, ss173213867 NT_008183.19:25497428:C:T NC_000008.11:72720792:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

2 citations for rs2247572
PMID Title Author Year Journal
19714205 Genome-wide association study implicates chromosome 9q21.31 as a susceptibility locus for asthma in mexican children. Hancock DB et al. 2009 PLoS genetics
29372809 [Association study of genetic markers of schizophrenia and its cognitive endophenotypes]. Bocharova AV et al. 2017 Genetika
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07