Name: rs2206277
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2206277

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr6:50830813 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.191299 (50827/265694, ALFA)
T=0.195406 (51722/264690, TOPMED)
T=0.184966 (25903/140042, GnomAD) (+ 19 more)
T=0.22343 (17584/78700, PAGE_STUDY)
T=0.31542 (8913/28258, 14KJPN)
T=0.30967 (5190/16760, 8.3KJPN)
T=0.2052 (1314/6404, 1000G_30x)
T=0.2117 (1060/5008, 1000G)
T=0.2522 (1130/4480, Estonian)
T=0.1754 (676/3854, ALSPAC)
T=0.1775 (658/3708, TWINSUK)
T=0.3017 (884/2930, KOREAN)
T=0.145 (145/998, GoNL)
T=0.228 (180/790, PRJEB37584)
T=0.173 (104/600, NorthernSweden)
T=0.143 (46/322, HapMap)
C=0.419 (99/236, SGDP_PRJ)
T=0.185 (40/216, Qatari)
T=0.285 (61/214, Vietnamese)
T=0.05 (4/80, Ancient Sardinia)
T=0.17 (7/40, GENOME_DK)
C=0.36 (10/28, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TFAP2B : Intron Variant
Publications: 3 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	265786	C=0.808707	T=0.191293
European	Sub	231344	C=0.814666	T=0.185334
African	Sub	9106	C=0.8517	T=0.1483
African Others	Sub	346	C=0.841	T=0.159
African American	Sub	8760	C=0.8522	T=0.1478
Asian	Sub	3842	C=0.7254	T=0.2746
East Asian	Sub	3086	C=0.7171	T=0.2829
Other Asian	Sub	756	C=0.759	T=0.241
Latin American 1	Sub	1028	C=0.7656	T=0.2344
Latin American 2	Sub	6570	C=0.6146	T=0.3854
South Asian	Sub	368	C=0.755	T=0.245
Other	Sub	13528	C=0.80049	T=0.19951

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	265694	C=0.808701	T=0.191299
Allele Frequency Aggregator	European	Sub	231270	C=0.814667	T=0.185333
Allele Frequency Aggregator	Other	Sub	13510	C=0.80037	T=0.19963
Allele Frequency Aggregator	African	Sub	9106	C=0.8517	T=0.1483
Allele Frequency Aggregator	Latin American 2	Sub	6570	C=0.6146	T=0.3854
Allele Frequency Aggregator	Asian	Sub	3842	C=0.7254	T=0.2746
Allele Frequency Aggregator	Latin American 1	Sub	1028	C=0.7656	T=0.2344
Allele Frequency Aggregator	South Asian	Sub	368	C=0.755	T=0.245
TopMed	Global	Study-wide	264690	C=0.804594	T=0.195406
gnomAD - Genomes	Global	Study-wide	140042	C=0.815034	T=0.184966
gnomAD - Genomes	European	Sub	75846	C=0.81241	T=0.18759
gnomAD - Genomes	African	Sub	41958	C=0.85638	T=0.14362
gnomAD - Genomes	American	Sub	13636	C=0.71524	T=0.28476
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	C=0.8173	T=0.1827
gnomAD - Genomes	East Asian	Sub	3130	C=0.7588	T=0.2412
gnomAD - Genomes	Other	Sub	2150	C=0.8121	T=0.1879
The PAGE Study	Global	Study-wide	78700	C=0.77657	T=0.22343
The PAGE Study	AfricanAmerican	Sub	32516	C=0.85709	T=0.14291
The PAGE Study	Mexican	Sub	10810	C=0.60416	T=0.39584
The PAGE Study	Asian	Sub	8318	C=0.6922	T=0.3078
The PAGE Study	PuertoRican	Sub	7916	C=0.7617	T=0.2383
The PAGE Study	NativeHawaiian	Sub	4534	C=0.8352	T=0.1648
The PAGE Study	Cuban	Sub	4230	C=0.8149	T=0.1851
The PAGE Study	Dominican	Sub	3828	C=0.8132	T=0.1868
The PAGE Study	CentralAmerican	Sub	2450	C=0.6816	T=0.3184
The PAGE Study	SouthAmerican	Sub	1982	C=0.6705	T=0.3295
The PAGE Study	NativeAmerican	Sub	1260	C=0.7444	T=0.2556
The PAGE Study	SouthAsian	Sub	856	C=0.752	T=0.248
14KJPN	JAPANESE	Study-wide	28258	C=0.68458	T=0.31542
8.3KJPN	JAPANESE	Study-wide	16760	C=0.69033	T=0.30967
1000Genomes_30x	Global	Study-wide	6404	C=0.7948	T=0.2052
1000Genomes_30x	African	Sub	1786	C=0.8819	T=0.1181
1000Genomes_30x	Europe	Sub	1266	C=0.8254	T=0.1746
1000Genomes_30x	South Asian	Sub	1202	C=0.7662	T=0.2338
1000Genomes_30x	East Asian	Sub	1170	C=0.7718	T=0.2282
1000Genomes_30x	American	Sub	980	C=0.659	T=0.341
1000Genomes	Global	Study-wide	5008	C=0.7883	T=0.2117
1000Genomes	African	Sub	1322	C=0.8729	T=0.1271
1000Genomes	East Asian	Sub	1008	C=0.7659	T=0.2341
1000Genomes	Europe	Sub	1006	C=0.8181	T=0.1819
1000Genomes	South Asian	Sub	978	C=0.761	T=0.239
1000Genomes	American	Sub	694	C=0.656	T=0.344
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.7478	T=0.2522
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.8246	T=0.1754
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.8225	T=0.1775
KOREAN population from KRGDB	KOREAN	Study-wide	2930	C=0.6983	T=0.3017
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.855	T=0.145
CNV burdens in cranial meningiomas	Global	Study-wide	790	C=0.772	T=0.228
CNV burdens in cranial meningiomas	CRM	Sub	790	C=0.772	T=0.228
Northern Sweden	ACPOP	Study-wide	600	C=0.827	T=0.173
HapMap	Global	Study-wide	322	C=0.857	T=0.143
HapMap	African	Sub	120	C=0.908	T=0.092
HapMap	American	Sub	114	C=0.904	T=0.096
HapMap	Asian	Sub	88	C=0.73	T=0.27
SGDP_PRJ	Global	Study-wide	236	C=0.419	T=0.581
Qatari	Global	Study-wide	216	C=0.815	T=0.185
A Vietnamese Genetic Variation Database	Global	Study-wide	214	C=0.715	T=0.285
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	80	C=0.95	T=0.05
The Danish reference pan genome	Danish	Study-wide	40	C=0.82	T=0.17
Siberian	Global	Study-wide	28	C=0.36	T=0.64

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 6	NC_000006.12:g.50830813C>T
GRCh37.p13 chr 6	NC_000006.11:g.50798526C>T
TFAP2B RefSeqGene	NG_008438.1:g.17088C>T

Gene: TFAP2B, transcription factor AP-2 beta (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TFAP2B transcript	NM_003221.4:c.601+2134C>T	N/A	Intron Variant
TFAP2B transcript variant X3	XM_011514837.3:c.628+2134… XM_011514837.3:c.628+2134C>T	N/A	Intron Variant
TFAP2B transcript variant X1	XM_017011233.2:c.766+2134… XM_017011233.2:c.766+2134C>T	N/A	Intron Variant
TFAP2B transcript variant X2	XM_017011234.2:c.730+2134… XM_017011234.2:c.730+2134C>T	N/A	Intron Variant
TFAP2B transcript variant X5	XM_017011235.3:c.142+2134… XM_017011235.3:c.142+2134C>T	N/A	Intron Variant
TFAP2B transcript variant X4	XR_007059334.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	T
GRCh38.p14 chr 6	NC_000006.12:g.50830813=	NC_000006.12:g.50830813C>T
GRCh37.p13 chr 6	NC_000006.11:g.50798526=	NC_000006.11:g.50798526C>T
TFAP2B RefSeqGene	NG_008438.1:g.17088=	NG_008438.1:g.17088C>T
TFAP2B transcript	NM_003221.3:c.601+2134=	NM_003221.3:c.601+2134C>T
TFAP2B transcript	NM_003221.4:c.601+2134=	NM_003221.4:c.601+2134C>T
TFAP2B transcript variant X1	XM_005249347.1:c.628+2134=	XM_005249347.1:c.628+2134C>T
TFAP2B transcript variant X2	XM_005249348.1:c.649+497=	XM_005249348.1:c.649+497C>T
TFAP2B transcript variant X3	XM_011514837.3:c.628+2134=	XM_011514837.3:c.628+2134C>T
TFAP2B transcript variant X1	XM_017011233.2:c.766+2134=	XM_017011233.2:c.766+2134C>T
TFAP2B transcript variant X2	XM_017011234.2:c.730+2134=	XM_017011234.2:c.730+2134C>T
TFAP2B transcript variant X5	XM_017011235.3:c.142+2134=	XM_017011235.3:c.142+2134C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

113 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss3147540	Jun 15, 2001 (96)
2	YUSUKE	ss4984902	Aug 28, 2002 (108)
3	ABI	ss44761295	Mar 14, 2006 (126)
4	BCMHGSC_JDW	ss93458733	Mar 24, 2008 (129)
5	1000GENOMES	ss110105504	Jan 24, 2009 (130)
6	ENSEMBL	ss143904085	Dec 01, 2009 (131)
7	GMI	ss156919715	Dec 01, 2009 (131)
8	ILLUMINA	ss160514423	Dec 01, 2009 (131)
9	1000GENOMES	ss222391139	Jul 14, 2010 (132)
10	1000GENOMES	ss233470619	Jul 14, 2010 (132)
11	1000GENOMES	ss240526926	Jul 15, 2010 (132)
12	GMI	ss278792931	May 04, 2012 (137)
13	ILLUMINA	ss410866034	Sep 17, 2011 (135)
14	ILLUMINA	ss480463062	May 04, 2012 (137)
15	ILLUMINA	ss480477298	May 04, 2012 (137)
16	ILLUMINA	ss481271920	Sep 08, 2015 (146)
17	ILLUMINA	ss485029022	May 04, 2012 (137)
18	EXOME_CHIP	ss491387202	May 04, 2012 (137)
19	ILLUMINA	ss537054115	Sep 08, 2015 (146)
20	TISHKOFF	ss559202794	Apr 25, 2013 (138)
21	SSMP	ss653146274	Apr 25, 2013 (138)
22	ILLUMINA	ss778858776	Sep 08, 2015 (146)
23	ILLUMINA	ss780683084	Sep 08, 2015 (146)
24	ILLUMINA	ss782960774	Sep 08, 2015 (146)
25	ILLUMINA	ss783356462	Sep 08, 2015 (146)
26	ILLUMINA	ss783922863	Sep 08, 2015 (146)
27	ILLUMINA	ss832216960	Sep 08, 2015 (146)
28	ILLUMINA	ss834319523	Sep 08, 2015 (146)
29	EVA-GONL	ss982930039	Aug 21, 2014 (142)
30	JMKIDD_LAB	ss1073614287	Aug 21, 2014 (142)
31	1000GENOMES	ss1320126815	Aug 21, 2014 (142)
32	DDI	ss1430720987	Apr 01, 2015 (144)
33	EVA_GENOME_DK	ss1581671850	Apr 01, 2015 (144)
34	EVA_DECODE	ss1592467092	Apr 01, 2015 (144)
35	EVA_UK10K_ALSPAC	ss1615577859	Apr 01, 2015 (144)
36	EVA_UK10K_TWINSUK	ss1658571892	Apr 01, 2015 (144)
37	ILLUMINA	ss1752640702	Sep 08, 2015 (146)
38	ILLUMINA	ss1752640703	Sep 08, 2015 (146)
39	HAMMER_LAB	ss1804428094	Sep 08, 2015 (146)
40	ILLUMINA	ss1917806653	Feb 12, 2016 (147)
41	WEILL_CORNELL_DGM	ss1926186464	Feb 12, 2016 (147)
42	ILLUMINA	ss1946180077	Feb 12, 2016 (147)
43	ILLUMINA	ss1958910499	Feb 12, 2016 (147)
44	GENOMED	ss1970395806	Jul 19, 2016 (147)
45	JJLAB	ss2023733059	Sep 14, 2016 (149)
46	USC_VALOUEV	ss2151912054	Dec 20, 2016 (150)
47	HUMAN_LONGEVITY	ss2284078949	Dec 20, 2016 (150)
48	ILLUMINA	ss2634453033	Nov 08, 2017 (151)
49	ILLUMINA	ss2634453034	Nov 08, 2017 (151)
50	ILLUMINA	ss2634453035	Nov 08, 2017 (151)
51	GRF	ss2707511791	Nov 08, 2017 (151)
52	GNOMAD	ss2838987280	Nov 08, 2017 (151)
53	AFFY	ss2985370139	Nov 08, 2017 (151)
54	AFFY	ss2986000984	Nov 08, 2017 (151)
55	SWEGEN	ss2999059918	Nov 08, 2017 (151)
56	ILLUMINA	ss3022622050	Nov 08, 2017 (151)
57	BIOINF_KMB_FNS_UNIBA	ss3025658217	Nov 08, 2017 (151)
58	CSHL	ss3346960848	Nov 08, 2017 (151)
59	ILLUMINA	ss3629548975	Oct 12, 2018 (152)
60	ILLUMINA	ss3629548976	Oct 12, 2018 (152)
61	ILLUMINA	ss3632369668	Oct 12, 2018 (152)
62	ILLUMINA	ss3633422109	Oct 12, 2018 (152)
63	ILLUMINA	ss3634145038	Oct 12, 2018 (152)
64	ILLUMINA	ss3635068326	Oct 12, 2018 (152)
65	ILLUMINA	ss3635068327	Oct 12, 2018 (152)
66	ILLUMINA	ss3635825862	Oct 12, 2018 (152)
67	ILLUMINA	ss3636791099	Oct 12, 2018 (152)
68	ILLUMINA	ss3637578678	Oct 12, 2018 (152)
69	ILLUMINA	ss3640775626	Oct 12, 2018 (152)
70	ILLUMINA	ss3640775627	Oct 12, 2018 (152)
71	ILLUMINA	ss3644913127	Oct 12, 2018 (152)
72	ILLUMINA	ss3653138896	Oct 12, 2018 (152)
73	ILLUMINA	ss3654135628	Oct 12, 2018 (152)
74	EGCUT_WGS	ss3666957873	Jul 13, 2019 (153)
75	EVA_DECODE	ss3717206062	Jul 13, 2019 (153)
76	ILLUMINA	ss3726347955	Jul 13, 2019 (153)
77	ACPOP	ss3733502888	Jul 13, 2019 (153)
78	ILLUMINA	ss3744555433	Jul 13, 2019 (153)
79	ILLUMINA	ss3745368282	Jul 13, 2019 (153)
80	ILLUMINA	ss3745368283	Jul 13, 2019 (153)
81	EVA	ss3765019940	Jul 13, 2019 (153)
82	PAGE_CC	ss3771294632	Jul 13, 2019 (153)
83	ILLUMINA	ss3772861809	Jul 13, 2019 (153)
84	ILLUMINA	ss3772861810	Jul 13, 2019 (153)
85	KHV_HUMAN_GENOMES	ss3808164683	Jul 13, 2019 (153)
86	EVA	ss3829922138	Apr 26, 2020 (154)
87	EVA	ss3838438666	Apr 26, 2020 (154)
88	EVA	ss3843883586	Apr 26, 2020 (154)
89	SGDP_PRJ	ss3864577450	Apr 26, 2020 (154)
90	KRGDB	ss3911391958	Apr 26, 2020 (154)
91	EVA	ss3984569353	Apr 26, 2021 (155)
92	EVA	ss3985223869	Apr 26, 2021 (155)
93	EVA	ss4017275528	Apr 26, 2021 (155)
94	TOPMED	ss4702943858	Apr 26, 2021 (155)
95	TOMMO_GENOMICS	ss5177496292	Apr 26, 2021 (155)
96	1000G_HIGH_COVERAGE	ss5268440631	Oct 13, 2022 (156)
97	EVA	ss5315156803	Oct 13, 2022 (156)
98	EVA	ss5365619762	Oct 13, 2022 (156)
99	HUGCELL_USP	ss5466114209	Oct 13, 2022 (156)
100	EVA	ss5508491439	Oct 13, 2022 (156)
101	1000G_HIGH_COVERAGE	ss5554338004	Oct 13, 2022 (156)
102	SANFORD_IMAGENETICS	ss5624629961	Oct 13, 2022 (156)
103	SANFORD_IMAGENETICS	ss5640397133	Oct 13, 2022 (156)
104	TOMMO_GENOMICS	ss5715539801	Oct 13, 2022 (156)
105	EVA	ss5799689264	Oct 13, 2022 (156)
106	YY_MCH	ss5807464917	Oct 13, 2022 (156)
107	EVA	ss5842239994	Oct 13, 2022 (156)
108	EVA	ss5847295637	Oct 13, 2022 (156)
109	EVA	ss5848098381	Oct 13, 2022 (156)
110	EVA	ss5855356451	Oct 13, 2022 (156)
111	EVA	ss5883812488	Oct 13, 2022 (156)
112	EVA	ss5968898698	Oct 13, 2022 (156)
113	EVA	ss5979787627	Oct 13, 2022 (156)
114	1000Genomes	NC_000006.11 - 50798526	Oct 12, 2018 (152)
115	1000Genomes_30x	NC_000006.12 - 50830813	Oct 13, 2022 (156)
116	The Avon Longitudinal Study of Parents and Children	NC_000006.11 - 50798526	Oct 12, 2018 (152)
117	Genetic variation in the Estonian population	NC_000006.11 - 50798526	Oct 12, 2018 (152)
118	The Danish reference pan genome	NC_000006.11 - 50798526	Apr 26, 2020 (154)
119	gnomAD - Genomes	NC_000006.12 - 50830813	Apr 26, 2021 (155)
120	Genome of the Netherlands Release 5	NC_000006.11 - 50798526	Apr 26, 2020 (154)
121	HapMap	NC_000006.12 - 50830813	Apr 26, 2020 (154)
122	KOREAN population from KRGDB	NC_000006.11 - 50798526	Apr 26, 2020 (154)
123	Northern Sweden	NC_000006.11 - 50798526	Jul 13, 2019 (153)
124	The PAGE Study	NC_000006.12 - 50830813	Jul 13, 2019 (153)
125	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000006.11 - 50798526	Apr 26, 2021 (155)
126	CNV burdens in cranial meningiomas	NC_000006.11 - 50798526	Apr 26, 2021 (155)
127	Qatari	NC_000006.11 - 50798526	Apr 26, 2020 (154)
128	SGDP_PRJ	NC_000006.11 - 50798526	Apr 26, 2020 (154)
129	Siberian	NC_000006.11 - 50798526	Apr 26, 2020 (154)
130	8.3KJPN	NC_000006.11 - 50798526	Apr 26, 2021 (155)
131	14KJPN	NC_000006.12 - 50830813	Oct 13, 2022 (156)
132	TopMed	NC_000006.12 - 50830813	Apr 26, 2021 (155)
133	UK 10K study - Twins	NC_000006.11 - 50798526	Oct 12, 2018 (152)
134	A Vietnamese Genetic Variation Database	NC_000006.11 - 50798526	Jul 13, 2019 (153)
135	ALFA	NC_000006.12 - 50830813	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs3798522	Oct 09, 2002 (108)
rs386560883	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss93458733, ss110105504, ss278792931, ss480463062, ss1592467092	NC_000006.10:50906484:C:T	NC_000006.12:50830812:C:T	(self)
31915119, 17797860, 12696121, 7836789, 7919638, 18569352, 6787753, 449796, 118761, 8228394, 16594430, 4428408, 35465599, 17797860, 3949419, ss222391139, ss233470619, ss240526926, ss480477298, ss481271920, ss485029022, ss491387202, ss537054115, ss559202794, ss653146274, ss778858776, ss780683084, ss782960774, ss783356462, ss783922863, ss832216960, ss834319523, ss982930039, ss1073614287, ss1320126815, ss1430720987, ss1581671850, ss1615577859, ss1658571892, ss1752640702, ss1752640703, ss1804428094, ss1917806653, ss1926186464, ss1946180077, ss1958910499, ss1970395806, ss2023733059, ss2151912054, ss2634453033, ss2634453034, ss2634453035, ss2707511791, ss2838987280, ss2985370139, ss2986000984, ss2999059918, ss3022622050, ss3346960848, ss3629548975, ss3629548976, ss3632369668, ss3633422109, ss3634145038, ss3635068326, ss3635068327, ss3635825862, ss3636791099, ss3637578678, ss3640775626, ss3640775627, ss3644913127, ss3653138896, ss3654135628, ss3666957873, ss3733502888, ss3744555433, ss3745368282, ss3745368283, ss3765019940, ss3772861809, ss3772861810, ss3829922138, ss3838438666, ss3864577450, ss3911391958, ss3984569353, ss3985223869, ss4017275528, ss5177496292, ss5315156803, ss5365619762, ss5508491439, ss5624629961, ss5640397133, ss5799689264, ss5842239994, ss5847295637, ss5848098381, ss5968898698, ss5979787627	NC_000006.11:50798525:C:T	NC_000006.12:50830812:C:T	(self)
41863939, 225168316, 3131714, 516101, 49376905, 540321416, 960943076, ss2284078949, ss3025658217, ss3717206062, ss3726347955, ss3771294632, ss3808164683, ss3843883586, ss4702943858, ss5268440631, ss5466114209, ss5554338004, ss5715539801, ss5807464917, ss5855356451, ss5883812488	NC_000006.12:50830812:C:T	NC_000006.12:50830812:C:T	(self)
ss3147540, ss4984902, ss44761295, ss143904085, ss156919715, ss160514423, ss410866034	NT_007592.15:50738525:C:T	NC_000006.12:50830812:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

3 citations for rs2206277

PMID	Title	Author	Year	Journal
21386085	A bivariate genome-wide approach to metabolic syndrome: STAMPEED consortium.	Kraja AT et al.	2011	Diabetes
23285067	Genetic polymorphisms of the main transcription factors for adiponectin gene promoter in regulation of adiponectin levels: association analysis in three European cohorts.	Kedenko L et al.	2012	PloS one
35124268	Mendelian Randomization Analysis Reveals No Causal Relationship Between Nonalcoholic Fatty Liver Disease and Severe COVID-19.	Li J et al.	2022	Clinical gastroenterology and hepatology

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs2206277