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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2176528

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr2:194007459 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>A / C>G / C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.276278 (73128/264690, TOPMED)
G=0.27536 (21713/78854, ALFA)
G=0.31363 (24671/78664, PAGE_STUDY) (+ 18 more)
G=0.3406 (2181/6404, 1000G_30x)
G=0.3409 (1707/5008, 1000G)
G=0.2683 (1202/4480, Estonian)
G=0.2818 (1086/3854, ALSPAC)
G=0.2875 (1066/3708, TWINSUK)
C=0.3676 (1077/2930, KOREAN)
C=0.3941 (722/1832, Korea1K)
G=0.3116 (354/1136, Daghestan)
G=0.289 (288/998, GoNL)
C=0.385 (303/788, PRJEB37584)
G=0.320 (192/600, NorthernSweden)
G=0.320 (105/328, HapMap)
C=0.347 (113/326, SGDP_PRJ)
G=0.264 (57/216, Qatari)
C=0.425 (91/214, Vietnamese)
G=0.24 (16/66, Ancient Sardinia)
G=0.15 (6/40, GENOME_DK)
C=0.37 (14/38, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
None
Publications
2 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 78854 C=0.72464 G=0.27536, T=0.00000
European Sub 70158 C=0.73132 G=0.26868, T=0.00000
African Sub 3042 C=0.9573 G=0.0427, T=0.0000
African Others Sub 150 C=0.973 G=0.027, T=0.000
African American Sub 2892 C=0.9564 G=0.0436, T=0.0000
Asian Sub 3170 C=0.3823 G=0.6177, T=0.0000
East Asian Sub 2564 C=0.3869 G=0.6131, T=0.0000
Other Asian Sub 606 C=0.363 G=0.637, T=0.000
Latin American 1 Sub 358 C=0.799 G=0.201, T=0.000
Latin American 2 Sub 490 C=0.716 G=0.284, T=0.000
South Asian Sub 210 C=0.676 G=0.324, T=0.000
Other Sub 1426 C=0.6522 G=0.3478, T=0.0000


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 C=0.723722 G=0.276278
Allele Frequency Aggregator Total Global 78854 C=0.72464 G=0.27536, T=0.00000
Allele Frequency Aggregator European Sub 70158 C=0.73132 G=0.26868, T=0.00000
Allele Frequency Aggregator Asian Sub 3170 C=0.3823 G=0.6177, T=0.0000
Allele Frequency Aggregator African Sub 3042 C=0.9573 G=0.0427, T=0.0000
Allele Frequency Aggregator Other Sub 1426 C=0.6522 G=0.3478, T=0.0000
Allele Frequency Aggregator Latin American 2 Sub 490 C=0.716 G=0.284, T=0.000
Allele Frequency Aggregator Latin American 1 Sub 358 C=0.799 G=0.201, T=0.000
Allele Frequency Aggregator South Asian Sub 210 C=0.676 G=0.324, T=0.000
The PAGE Study Global Study-wide 78664 C=0.68637 G=0.31363
The PAGE Study AfricanAmerican Sub 32504 C=0.86085 G=0.13915
The PAGE Study Mexican Sub 10802 C=0.55397 G=0.44603
The PAGE Study Asian Sub 8308 C=0.3993 G=0.6007
The PAGE Study PuertoRican Sub 7918 C=0.7070 G=0.2930
The PAGE Study NativeHawaiian Sub 4534 C=0.3509 G=0.6491
The PAGE Study Cuban Sub 4226 C=0.6829 G=0.3171
The PAGE Study Dominican Sub 3826 C=0.7669 G=0.2331
The PAGE Study CentralAmerican Sub 2450 C=0.5335 G=0.4665
The PAGE Study SouthAmerican Sub 1980 C=0.5172 G=0.4828
The PAGE Study NativeAmerican Sub 1260 C=0.6825 G=0.3175
The PAGE Study SouthAsian Sub 856 C=0.597 G=0.403
1000Genomes_30x Global Study-wide 6404 C=0.6594 G=0.3406
1000Genomes_30x African Sub 1786 C=0.9104 G=0.0896
1000Genomes_30x Europe Sub 1266 C=0.7306 G=0.2694
1000Genomes_30x South Asian Sub 1202 C=0.5840 G=0.4160
1000Genomes_30x East Asian Sub 1170 C=0.3744 G=0.6256
1000Genomes_30x American Sub 980 C=0.543 G=0.457
1000Genomes Global Study-wide 5008 C=0.6591 G=0.3409
1000Genomes African Sub 1322 C=0.9160 G=0.0840
1000Genomes East Asian Sub 1008 C=0.3700 G=0.6300
1000Genomes Europe Sub 1006 C=0.7386 G=0.2614
1000Genomes South Asian Sub 978 C=0.599 G=0.401
1000Genomes American Sub 694 C=0.559 G=0.441
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.7317 G=0.2683
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.7182 G=0.2818
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.7125 G=0.2875
KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.3676 G=0.6324, T=0.0000
Korean Genome Project KOREAN Study-wide 1832 C=0.3941 G=0.6059
Genome-wide autozygosity in Daghestan Global Study-wide 1136 C=0.6884 G=0.3116
Genome-wide autozygosity in Daghestan Daghestan Sub 628 C=0.702 G=0.298
Genome-wide autozygosity in Daghestan Near_East Sub 144 C=0.681 G=0.319
Genome-wide autozygosity in Daghestan Central Asia Sub 122 C=0.615 G=0.385
Genome-wide autozygosity in Daghestan Europe Sub 108 C=0.713 G=0.287
Genome-wide autozygosity in Daghestan South Asian Sub 98 C=0.60 G=0.40
Genome-wide autozygosity in Daghestan Caucasus Sub 36 C=0.89 G=0.11
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.711 G=0.289
CNV burdens in cranial meningiomas Global Study-wide 788 C=0.385 G=0.615
CNV burdens in cranial meningiomas CRM Sub 788 C=0.385 G=0.615
Northern Sweden ACPOP Study-wide 600 C=0.680 G=0.320
HapMap Global Study-wide 328 C=0.680 G=0.320
HapMap African Sub 120 C=0.933 G=0.067
HapMap American Sub 120 C=0.617 G=0.383
HapMap Asian Sub 88 C=0.42 G=0.58
SGDP_PRJ Global Study-wide 326 C=0.347 G=0.653
Qatari Global Study-wide 216 C=0.736 G=0.264
A Vietnamese Genetic Variation Database Global Study-wide 214 C=0.425 G=0.575
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 66 C=0.76 G=0.24
The Danish reference pan genome Danish Study-wide 40 C=0.85 G=0.15
Siberian Global Study-wide 38 C=0.37 G=0.63
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 2 NC_000002.12:g.194007459C>A
GRCh38.p14 chr 2 NC_000002.12:g.194007459C>G
GRCh38.p14 chr 2 NC_000002.12:g.194007459C>T
GRCh37.p13 chr 2 NC_000002.11:g.194872183C>A
GRCh37.p13 chr 2 NC_000002.11:g.194872183C>G
GRCh37.p13 chr 2 NC_000002.11:g.194872183C>T
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= A G T
GRCh38.p14 chr 2 NC_000002.12:g.194007459= NC_000002.12:g.194007459C>A NC_000002.12:g.194007459C>G NC_000002.12:g.194007459C>T
GRCh37.p13 chr 2 NC_000002.11:g.194872183= NC_000002.11:g.194872183C>A NC_000002.11:g.194872183C>G NC_000002.11:g.194872183C>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

89 SubSNP, 27 Frequency submissions
No Submitter Submission ID Date (Build)
1 TSC-CSHL ss3112411 Jun 15, 2001 (96)
2 PERLEGEN ss24170196 Sep 20, 2004 (123)
3 PERLEGEN ss68839128 May 16, 2007 (127)
4 BGI ss103652321 Dec 01, 2009 (131)
5 1000GENOMES ss110514274 Jan 24, 2009 (130)
6 GMI ss158139818 Dec 01, 2009 (131)
7 COMPLETE_GENOMICS ss165785112 Jul 04, 2010 (132)
8 BCM-HGSC-SUB ss205711165 Jul 04, 2010 (132)
9 1000GENOMES ss219733089 Jul 14, 2010 (132)
10 1000GENOMES ss231529155 Jul 14, 2010 (132)
11 1000GENOMES ss239003920 Jul 15, 2010 (132)
12 GMI ss276845255 May 04, 2012 (137)
13 ILLUMINA ss483506634 May 04, 2012 (137)
14 ILLUMINA ss483983967 May 04, 2012 (137)
15 ILLUMINA ss535714643 Sep 08, 2015 (146)
16 TISHKOFF ss556127036 Apr 25, 2013 (138)
17 SSMP ss649790907 Apr 25, 2013 (138)
18 ILLUMINA ss780303198 Aug 21, 2014 (142)
19 ILLUMINA ss782196724 Aug 21, 2014 (142)
20 ILLUMINA ss835789964 Aug 21, 2014 (142)
21 EVA-GONL ss977802160 Aug 21, 2014 (142)
22 JMKIDD_LAB ss1069823349 Aug 21, 2014 (142)
23 1000GENOMES ss1301032857 Aug 21, 2014 (142)
24 HAMMER_LAB ss1397316114 Sep 08, 2015 (146)
25 DDI ss1428865595 Apr 01, 2015 (144)
26 EVA_GENOME_DK ss1579261524 Apr 01, 2015 (144)
27 EVA_DECODE ss1587250322 Apr 01, 2015 (144)
28 EVA_UK10K_ALSPAC ss1605468838 Apr 01, 2015 (144)
29 EVA_UK10K_TWINSUK ss1648462871 Apr 01, 2015 (144)
30 WEILL_CORNELL_DGM ss1921050282 Feb 12, 2016 (147)
31 ILLUMINA ss1946062335 Feb 12, 2016 (147)
32 ILLUMINA ss1958491875 Feb 12, 2016 (147)
33 GENOMED ss1968988809 Jul 19, 2016 (147)
34 JJLAB ss2021066227 Sep 14, 2016 (149)
35 USC_VALOUEV ss2149131298 Dec 20, 2016 (150)
36 HUMAN_LONGEVITY ss2237854968 Dec 20, 2016 (150)
37 SYSTEMSBIOZJU ss2625036581 Nov 08, 2017 (151)
38 ILLUMINA ss2633721833 Nov 08, 2017 (151)
39 GRF ss2703775803 Nov 08, 2017 (151)
40 ILLUMINA ss2710921934 Nov 08, 2017 (151)
41 GNOMAD ss2784559891 Nov 08, 2017 (151)
42 AFFY ss2985816836 Nov 08, 2017 (151)
43 SWEGEN ss2991109739 Nov 08, 2017 (151)
44 ILLUMINA ss3022054709 Nov 08, 2017 (151)
45 BIOINF_KMB_FNS_UNIBA ss3024293773 Nov 08, 2017 (151)
46 CSHL ss3344674618 Nov 08, 2017 (151)
47 ILLUMINA ss3625772891 Oct 11, 2018 (152)
48 ILLUMINA ss3628253515 Oct 11, 2018 (152)
49 ILLUMINA ss3631682654 Oct 11, 2018 (152)
50 ILLUMINA ss3642146849 Oct 11, 2018 (152)
51 ILLUMINA ss3644765001 Oct 11, 2018 (152)
52 ILLUMINA ss3652502897 Oct 11, 2018 (152)
53 EGCUT_WGS ss3658994282 Jul 13, 2019 (153)
54 EVA_DECODE ss3705720649 Jul 13, 2019 (153)
55 ILLUMINA ss3725858928 Jul 13, 2019 (153)
56 ACPOP ss3729239843 Jul 13, 2019 (153)
57 ILLUMINA ss3744188412 Jul 13, 2019 (153)
58 ILLUMINA ss3744485107 Jul 13, 2019 (153)
59 EVA ss3757903113 Jul 13, 2019 (153)
60 PAGE_CC ss3770975297 Jul 13, 2019 (153)
61 PACBIO ss3784109362 Jul 13, 2019 (153)
62 PACBIO ss3789654477 Jul 13, 2019 (153)
63 PACBIO ss3794527634 Jul 13, 2019 (153)
64 KHV_HUMAN_GENOMES ss3802261941 Jul 13, 2019 (153)
65 EVA ss3827429124 Apr 25, 2020 (154)
66 EVA ss3837134103 Apr 25, 2020 (154)
67 EVA ss3842554973 Apr 25, 2020 (154)
68 SGDP_PRJ ss3854282956 Apr 25, 2020 (154)
69 KRGDB ss3899956812 Apr 25, 2020 (154)
70 KOGIC ss3949785551 Apr 25, 2020 (154)
71 EVA ss3984495726 Apr 26, 2021 (155)
72 EVA ss3984944995 Apr 26, 2021 (155)
73 TOPMED ss4539160629 Apr 26, 2021 (155)
74 TOMMO_GENOMICS ss5155799795 Apr 26, 2021 (155)
75 TOMMO_GENOMICS ss5155799796 Apr 26, 2021 (155)
76 1000G_HIGH_COVERAGE ss5251495525 Oct 12, 2022 (156)
77 EVA ss5314798030 Oct 12, 2022 (156)
78 EVA ss5335055792 Oct 12, 2022 (156)
79 HUGCELL_USP ss5451165214 Oct 12, 2022 (156)
80 1000G_HIGH_COVERAGE ss5528565554 Oct 12, 2022 (156)
81 SANFORD_IMAGENETICS ss5630653184 Oct 12, 2022 (156)
82 TOMMO_GENOMICS ss5686477431 Oct 12, 2022 (156)
83 TOMMO_GENOMICS ss5686477432 Oct 12, 2022 (156)
84 YY_MCH ss5803096168 Oct 12, 2022 (156)
85 EVA ss5821383523 Oct 12, 2022 (156)
86 EVA ss5847897298 Oct 12, 2022 (156)
87 EVA ss5852893644 Oct 12, 2022 (156)
88 EVA ss5934090461 Oct 12, 2022 (156)
89 EVA ss5956895503 Oct 12, 2022 (156)
90 1000Genomes NC_000002.11 - 194872183 Oct 11, 2018 (152)
91 1000Genomes_30x NC_000002.12 - 194007459 Oct 12, 2022 (156)
92 The Avon Longitudinal Study of Parents and Children NC_000002.11 - 194872183 Oct 11, 2018 (152)
93 Genome-wide autozygosity in Daghestan NC_000002.10 - 194580428 Apr 25, 2020 (154)
94 Genetic variation in the Estonian population NC_000002.11 - 194872183 Oct 11, 2018 (152)
95 The Danish reference pan genome NC_000002.11 - 194872183 Apr 25, 2020 (154)
96 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 86354375 (NC_000002.12:194007458:C:G 35615/139952)
Row 86354376 (NC_000002.12:194007458:C:T 1/140002)

- Apr 26, 2021 (155)
97 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 86354375 (NC_000002.12:194007458:C:G 35615/139952)
Row 86354376 (NC_000002.12:194007458:C:T 1/140002)

- Apr 26, 2021 (155)
98 Genome of the Netherlands Release 5 NC_000002.11 - 194872183 Apr 25, 2020 (154)
99 HapMap NC_000002.12 - 194007459 Apr 25, 2020 (154)
100 KOREAN population from KRGDB NC_000002.11 - 194872183 Apr 25, 2020 (154)
101 Korean Genome Project NC_000002.12 - 194007459 Apr 25, 2020 (154)
102 Northern Sweden NC_000002.11 - 194872183 Jul 13, 2019 (153)
103 The PAGE Study NC_000002.12 - 194007459 Jul 13, 2019 (153)
104 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000002.11 - 194872183 Apr 26, 2021 (155)
105 CNV burdens in cranial meningiomas NC_000002.11 - 194872183 Apr 26, 2021 (155)
106 Qatari NC_000002.11 - 194872183 Apr 25, 2020 (154)
107 SGDP_PRJ NC_000002.11 - 194872183 Apr 25, 2020 (154)
108 Siberian NC_000002.11 - 194872183 Apr 25, 2020 (154)
109 8.3KJPN

Submission ignored due to conflicting rows:
Row 13769102 (NC_000002.11:194872182:C:G 10207/16760)
Row 13769103 (NC_000002.11:194872182:C:A 1/16760)

- Apr 26, 2021 (155)
110 8.3KJPN

Submission ignored due to conflicting rows:
Row 13769102 (NC_000002.11:194872182:C:G 10207/16760)
Row 13769103 (NC_000002.11:194872182:C:A 1/16760)

- Apr 26, 2021 (155)
111 14KJPN

Submission ignored due to conflicting rows:
Row 20314535 (NC_000002.12:194007458:C:G 17185/28256)
Row 20314536 (NC_000002.12:194007458:C:A 1/28256)

- Oct 12, 2022 (156)
112 14KJPN

Submission ignored due to conflicting rows:
Row 20314535 (NC_000002.12:194007458:C:G 17185/28256)
Row 20314536 (NC_000002.12:194007458:C:A 1/28256)

- Oct 12, 2022 (156)
113 TopMed NC_000002.12 - 194007459 Apr 26, 2021 (155)
114 UK 10K study - Twins NC_000002.11 - 194872183 Oct 11, 2018 (152)
115 A Vietnamese Genetic Variation Database NC_000002.11 - 194872183 Jul 13, 2019 (153)
116 ALFA NC_000002.12 - 194007459 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17619732 Oct 07, 2004 (123)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss5155799796 NC_000002.11:194872182:C:A NC_000002.12:194007458:C:A (self)
ss5686477432 NC_000002.12:194007458:C:A NC_000002.12:194007458:C:A
265942, ss110514274, ss165785112, ss205711165, ss276845255, ss483983967, ss1397316114, ss1587250322 NC_000002.10:194580427:C:G NC_000002.12:194007458:C:G (self)
12114348, 6692987, 4732530, 5426463, 2938642, 7134206, 2524708, 170922, 45062, 3092212, 6299936, 1647652, 6692987, 1459552, ss219733089, ss231529155, ss239003920, ss483506634, ss535714643, ss556127036, ss649790907, ss780303198, ss782196724, ss835789964, ss977802160, ss1069823349, ss1301032857, ss1428865595, ss1579261524, ss1605468838, ss1648462871, ss1921050282, ss1946062335, ss1958491875, ss1968988809, ss2021066227, ss2149131298, ss2625036581, ss2633721833, ss2703775803, ss2710921934, ss2784559891, ss2985816836, ss2991109739, ss3022054709, ss3344674618, ss3625772891, ss3628253515, ss3631682654, ss3642146849, ss3644765001, ss3652502897, ss3658994282, ss3729239843, ss3744188412, ss3744485107, ss3757903113, ss3784109362, ss3789654477, ss3794527634, ss3827429124, ss3837134103, ss3854282956, ss3899956812, ss3984495726, ss3984944995, ss5155799795, ss5314798030, ss5335055792, ss5630653184, ss5821383523, ss5847897298, ss5956895503 NC_000002.11:194872182:C:G NC_000002.12:194007458:C:G (self)
16091489, 1980796, 6163552, 196766, 342983508, 1274425869, ss2237854968, ss3024293773, ss3705720649, ss3725858928, ss3770975297, ss3802261941, ss3842554973, ss3949785551, ss4539160629, ss5251495525, ss5451165214, ss5528565554, ss5686477431, ss5803096168, ss5852893644, ss5934090461 NC_000002.12:194007458:C:G NC_000002.12:194007458:C:G (self)
ss3112411, ss24170196, ss68839128, ss103652321, ss158139818 NT_005403.17:45081600:C:G NC_000002.12:194007458:C:G (self)
7134206, ss3899956812 NC_000002.11:194872182:C:T NC_000002.12:194007458:C:T (self)
1274425869, ss2237854968 NC_000002.12:194007458:C:T NC_000002.12:194007458:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

2 citations for rs2176528
PMID Title Author Year Journal
21926972 Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. 2011 Nature genetics
28234206 Bipolar disorder risk gene FOXO6 modulates negative symptoms in schizophrenia: a neuroimaging genetics study. Shenker JJ et al. 2017 Journal of psychiatry & neuroscience
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07