Name: rs2138798
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2138798

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:63284300 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.202637 (53636/264690, TOPMED)
T=0.188429 (26382/140010, GnomAD)
T=0.155565 (18721/120342, ALFA) (+ 19 more)
G=0.37865 (10700/28258, 14KJPN)
G=0.37422 (6272/16760, 8.3KJPN)
T=0.3229 (2068/6404, 1000G_30x)
T=0.3293 (1649/5008, 1000G)
T=0.1368 (613/4480, Estonian)
T=0.1383 (533/3854, ALSPAC)
T=0.1392 (516/3708, TWINSUK)
G=0.3942 (1155/2930, KOREAN)
T=0.3243 (613/1890, HapMap)
G=0.3941 (722/1832, Korea1K)
T=0.158 (158/998, GoNL)
G=0.452 (295/652, PRJEB37584)
T=0.105 (63/600, NorthernSweden)
G=0.307 (91/296, SGDP_PRJ)
T=0.171 (37/216, Qatari)
G=0.314 (66/210, Vietnamese)
T=0.15 (6/40, GENOME_DK)
G=0.35 (9/26, Siberian)
T=0.00 (0/24, Ancient Sardinia)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: WDPCP : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	120342	G=0.844435	T=0.155565
European	Sub	103158	G=0.857830	T=0.142170
African	Sub	7096	G=0.7448	T=0.2552
African Others	Sub	242	G=0.744	T=0.256
African American	Sub	6854	G=0.7448	T=0.2552
Asian	Sub	628	G=0.347	T=0.653
East Asian	Sub	496	G=0.375	T=0.625
Other Asian	Sub	132	G=0.242	T=0.758
Latin American 1	Sub	692	G=0.814	T=0.186
Latin American 2	Sub	2258	G=0.8171	T=0.1829
South Asian	Sub	184	G=0.614	T=0.386
Other	Sub	6326	G=0.8070	T=0.1930

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.797363	T=0.202637
gnomAD - Genomes	Global	Study-wide	140010	G=0.811571	T=0.188429
gnomAD - Genomes	European	Sub	75828	G=0.86365	T=0.13635
gnomAD - Genomes	African	Sub	41956	G=0.74328	T=0.25672
gnomAD - Genomes	American	Sub	13638	G=0.82475	T=0.17525
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	G=0.8281	T=0.1719
gnomAD - Genomes	East Asian	Sub	3120	G=0.4022	T=0.5978
gnomAD - Genomes	Other	Sub	2146	G=0.7922	T=0.2078
Allele Frequency Aggregator	Total	Global	120342	G=0.844435	T=0.155565
Allele Frequency Aggregator	European	Sub	103158	G=0.857830	T=0.142170
Allele Frequency Aggregator	African	Sub	7096	G=0.7448	T=0.2552
Allele Frequency Aggregator	Other	Sub	6326	G=0.8070	T=0.1930
Allele Frequency Aggregator	Latin American 2	Sub	2258	G=0.8171	T=0.1829
Allele Frequency Aggregator	Latin American 1	Sub	692	G=0.814	T=0.186
Allele Frequency Aggregator	Asian	Sub	628	G=0.347	T=0.653
Allele Frequency Aggregator	South Asian	Sub	184	G=0.614	T=0.386
14KJPN	JAPANESE	Study-wide	28258	G=0.37865	T=0.62135
8.3KJPN	JAPANESE	Study-wide	16760	G=0.37422	T=0.62578
1000Genomes_30x	Global	Study-wide	6404	G=0.6771	T=0.3229
1000Genomes_30x	African	Sub	1786	G=0.7111	T=0.2889
1000Genomes_30x	Europe	Sub	1266	G=0.8626	T=0.1374
1000Genomes_30x	South Asian	Sub	1202	G=0.5765	T=0.4235
1000Genomes_30x	East Asian	Sub	1170	G=0.4051	T=0.5949
1000Genomes_30x	American	Sub	980	G=0.823	T=0.177
1000Genomes	Global	Study-wide	5008	G=0.6707	T=0.3293
1000Genomes	African	Sub	1322	G=0.7179	T=0.2821
1000Genomes	East Asian	Sub	1008	G=0.3988	T=0.6012
1000Genomes	Europe	Sub	1006	G=0.8678	T=0.1322
1000Genomes	South Asian	Sub	978	G=0.588	T=0.412
1000Genomes	American	Sub	694	G=0.807	T=0.193
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.8632	T=0.1368
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.8617	T=0.1383
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.8608	T=0.1392
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.3942	T=0.6058
HapMap	Global	Study-wide	1890	G=0.6757	T=0.3243
HapMap	American	Sub	770	G=0.694	T=0.306
HapMap	African	Sub	690	G=0.720	T=0.280
HapMap	Asian	Sub	254	G=0.406	T=0.594
HapMap	Europe	Sub	176	G=0.812	T=0.188
Korean Genome Project	KOREAN	Study-wide	1832	G=0.3941	T=0.6059
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.842	T=0.158
CNV burdens in cranial meningiomas	Global	Study-wide	652	G=0.452	T=0.548
CNV burdens in cranial meningiomas	CRM	Sub	652	G=0.452	T=0.548
Northern Sweden	ACPOP	Study-wide	600	G=0.895	T=0.105
SGDP_PRJ	Global	Study-wide	296	G=0.307	T=0.693
Qatari	Global	Study-wide	216	G=0.829	T=0.171
A Vietnamese Genetic Variation Database	Global	Study-wide	210	G=0.314	T=0.686
The Danish reference pan genome	Danish	Study-wide	40	G=0.85	T=0.15
Siberian	Global	Study-wide	26	G=0.35	T=0.65
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	24	G=1.00	T=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.63284300G>T
GRCh37.p13 chr 2	NC_000002.11:g.63511435G>T
WDPCP RefSeqGene	NG_028144.2:g.561526C>A

Gene: WDPCP, WD repeat containing planar cell polarity effector (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
WDPCP transcript variant 1	NM_001042692.3:c.1336-248… NM_001042692.3:c.1336-24891C>A	N/A	Intron Variant
WDPCP transcript variant 4	NM_001354044.2:c.1741-248… NM_001354044.2:c.1741-24891C>A	N/A	Intron Variant
WDPCP transcript variant 2	NM_015910.7:c.1813-24891C… NM_015910.7:c.1813-24891C>A	N/A	Intron Variant
WDPCP transcript variant 5	NM_001354045.2:c.	N/A	Genic Downstream Transcript Variant
WDPCP transcript variant 3	NR_122106.2:n.	N/A	Intron Variant
WDPCP transcript variant 6	NR_148704.2:n.	N/A	Intron Variant
WDPCP transcript variant 7	NR_148705.2:n.	N/A	Intron Variant
WDPCP transcript variant X1	XM_005264348.5:c.1813-248… XM_005264348.5:c.1813-24891C>A	N/A	Intron Variant
WDPCP transcript variant X4	XM_011532881.4:c.1741-248… XM_011532881.4:c.1741-24891C>A	N/A	Intron Variant
WDPCP transcript variant X10	XM_011532884.4:c.1813-248… XM_011532884.4:c.1813-24891C>A	N/A	Intron Variant
WDPCP transcript variant X12	XM_011532887.4:c.1813-248… XM_011532887.4:c.1813-24891C>A	N/A	Intron Variant
WDPCP transcript variant X2	XM_047444626.1:c.1741-248… XM_047444626.1:c.1741-24891C>A	N/A	Intron Variant
WDPCP transcript variant X3	XM_047444627.1:c.1741-248… XM_047444627.1:c.1741-24891C>A	N/A	Intron Variant
WDPCP transcript variant X5	XM_047444628.1:c.1741-248… XM_047444628.1:c.1741-24891C>A	N/A	Intron Variant
WDPCP transcript variant X6	XM_047444629.1:c.1741-248… XM_047444629.1:c.1741-24891C>A	N/A	Intron Variant
WDPCP transcript variant X7	XM_047444630.1:c.1714-248… XM_047444630.1:c.1714-24891C>A	N/A	Intron Variant
WDPCP transcript variant X8	XM_047444631.1:c.1741-248… XM_047444631.1:c.1741-24891C>A	N/A	Intron Variant
WDPCP transcript variant X11	XM_047444632.1:c.1813-248… XM_047444632.1:c.1813-24891C>A	N/A	Intron Variant
WDPCP transcript variant X13	XM_047444633.1:c.1336-248… XM_047444633.1:c.1336-24891C>A	N/A	Intron Variant
WDPCP transcript variant X16	XM_011532890.4:c.	N/A	Genic Downstream Transcript Variant
WDPCP transcript variant X14	XM_017004253.3:c.	N/A	Genic Downstream Transcript Variant
WDPCP transcript variant X17	XM_047444634.1:c.	N/A	Genic Downstream Transcript Variant
WDPCP transcript variant X9	XR_007076379.1:n.	N/A	Intron Variant
WDPCP transcript variant X15	XR_007076380.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	T
GRCh38.p14 chr 2	NC_000002.12:g.63284300=	NC_000002.12:g.63284300G>T
GRCh37.p13 chr 2	NC_000002.11:g.63511435=	NC_000002.11:g.63511435G>T
WDPCP RefSeqGene	NG_028144.2:g.561526=	NG_028144.2:g.561526C>A
WDPCP transcript variant 1	NM_001042692.3:c.1336-24891=	NM_001042692.3:c.1336-24891C>A
WDPCP transcript variant 4	NM_001354044.2:c.1741-24891=	NM_001354044.2:c.1741-24891C>A
WDPCP transcript variant 2	NM_015910.5:c.1813-24891=	NM_015910.5:c.1813-24891C>A
WDPCP transcript variant 2	NM_015910.7:c.1813-24891=	NM_015910.7:c.1813-24891C>A
WDPCP transcript variant X1	XM_005264348.1:c.1813-24891=	XM_005264348.1:c.1813-24891C>A
WDPCP transcript variant X1	XM_005264348.5:c.1813-24891=	XM_005264348.5:c.1813-24891C>A
WDPCP transcript variant X2	XM_005264349.1:c.1372-24891=	XM_005264349.1:c.1372-24891C>A
WDPCP transcript variant X3	XM_005264350.1:c.1336-24891=	XM_005264350.1:c.1336-24891C>A
WDPCP transcript variant X4	XM_011532881.4:c.1741-24891=	XM_011532881.4:c.1741-24891C>A
WDPCP transcript variant X10	XM_011532884.4:c.1813-24891=	XM_011532884.4:c.1813-24891C>A
WDPCP transcript variant X12	XM_011532887.4:c.1813-24891=	XM_011532887.4:c.1813-24891C>A
WDPCP transcript variant X2	XM_047444626.1:c.1741-24891=	XM_047444626.1:c.1741-24891C>A
WDPCP transcript variant X3	XM_047444627.1:c.1741-24891=	XM_047444627.1:c.1741-24891C>A
WDPCP transcript variant X5	XM_047444628.1:c.1741-24891=	XM_047444628.1:c.1741-24891C>A
WDPCP transcript variant X6	XM_047444629.1:c.1741-24891=	XM_047444629.1:c.1741-24891C>A
WDPCP transcript variant X7	XM_047444630.1:c.1714-24891=	XM_047444630.1:c.1714-24891C>A
WDPCP transcript variant X8	XM_047444631.1:c.1741-24891=	XM_047444631.1:c.1741-24891C>A
WDPCP transcript variant X11	XM_047444632.1:c.1813-24891=	XM_047444632.1:c.1813-24891C>A
WDPCP transcript variant X13	XM_047444633.1:c.1336-24891=	XM_047444633.1:c.1336-24891C>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

100 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss3065127	Jun 15, 2001 (96)
2	ABI	ss41641640	Mar 14, 2006 (126)
3	ILLUMINA	ss75173444	Dec 06, 2007 (129)
4	HGSV	ss82463331	Dec 14, 2007 (130)
5	BGI	ss103509261	Dec 01, 2009 (131)
6	ILLUMINA-UK	ss117733779	Feb 14, 2009 (130)
7	KRIBB_YJKIM	ss119418279	Dec 01, 2009 (131)
8	GMI	ss157148064	Dec 01, 2009 (131)
9	ILLUMINA	ss160506045	Dec 01, 2009 (131)
10	COMPLETE_GENOMICS	ss166687575	Jul 04, 2010 (132)
11	ILLUMINA	ss173135788	Jul 04, 2010 (132)
12	BUSHMAN	ss200535350	Jul 04, 2010 (132)
13	BCM-HGSC-SUB	ss205822223	Jul 04, 2010 (132)
14	1000GENOMES	ss219288645	Jul 14, 2010 (132)
15	1000GENOMES	ss231199736	Jul 14, 2010 (132)
16	1000GENOMES	ss238746999	Jul 15, 2010 (132)
17	GMI	ss276498977	May 04, 2012 (137)
18	ILLUMINA	ss480436206	May 04, 2012 (137)
19	ILLUMINA	ss480449913	May 04, 2012 (137)
20	ILLUMINA	ss481238809	Sep 08, 2015 (146)
21	ILLUMINA	ss485015531	May 04, 2012 (137)
22	ILLUMINA	ss537043736	Sep 08, 2015 (146)
23	TISHKOFF	ss555615253	Apr 25, 2013 (138)
24	SSMP	ss649203621	Apr 25, 2013 (138)
25	ILLUMINA	ss778482393	Sep 08, 2015 (146)
26	ILLUMINA	ss782954071	Sep 08, 2015 (146)
27	ILLUMINA	ss783916272	Sep 08, 2015 (146)
28	ILLUMINA	ss832210090	Sep 08, 2015 (146)
29	ILLUMINA	ss833938282	Sep 08, 2015 (146)
30	EVA-GONL	ss976917618	Aug 21, 2014 (142)
31	JMKIDD_LAB	ss1069178916	Aug 21, 2014 (142)
32	1000GENOMES	ss1297556658	Aug 21, 2014 (142)
33	DDI	ss1428600893	Apr 01, 2015 (144)
34	EVA_GENOME_DK	ss1578912497	Apr 01, 2015 (144)
35	EVA_UK10K_ALSPAC	ss1603687731	Apr 01, 2015 (144)
36	EVA_UK10K_TWINSUK	ss1646681764	Apr 01, 2015 (144)
37	EVA_SVP	ss1712461508	Apr 01, 2015 (144)
38	ILLUMINA	ss1752364792	Sep 08, 2015 (146)
39	HAMMER_LAB	ss1796851088	Sep 08, 2015 (146)
40	WEILL_CORNELL_DGM	ss1920146704	Feb 12, 2016 (147)
41	GENOMED	ss1968788961	Jul 19, 2016 (147)
42	JJLAB	ss2020607134	Sep 14, 2016 (149)
43	USC_VALOUEV	ss2148652052	Dec 20, 2016 (150)
44	HUMAN_LONGEVITY	ss2230973134	Dec 20, 2016 (150)
45	SYSTEMSBIOZJU	ss2624813802	Nov 08, 2017 (151)
46	ILLUMINA	ss2633624306	Nov 08, 2017 (151)
47	ILLUMINA	ss2635091410	Nov 08, 2017 (151)
48	GRF	ss2703223080	Nov 08, 2017 (151)
49	GNOMAD	ss2774390654	Nov 08, 2017 (151)
50	AFFY	ss2985797694	Nov 08, 2017 (151)
51	SWEGEN	ss2989629358	Nov 08, 2017 (151)
52	ILLUMINA	ss3021978113	Nov 08, 2017 (151)
53	BIOINF_KMB_FNS_UNIBA	ss3024070459	Nov 08, 2017 (151)
54	CSHL	ss3344263791	Nov 08, 2017 (151)
55	ILLUMINA	ss3628080429	Oct 11, 2018 (152)
56	ILLUMINA	ss3631590601	Oct 11, 2018 (152)
57	ILLUMINA	ss3633202992	Oct 11, 2018 (152)
58	ILLUMINA	ss3633914785	Oct 11, 2018 (152)
59	ILLUMINA	ss3634769700	Oct 11, 2018 (152)
60	ILLUMINA	ss3635600988	Oct 11, 2018 (152)
61	ILLUMINA	ss3636456494	Oct 11, 2018 (152)
62	ILLUMINA	ss3637352864	Oct 11, 2018 (152)
63	ILLUMINA	ss3638264440	Oct 11, 2018 (152)
64	ILLUMINA	ss3640477002	Oct 11, 2018 (152)
65	ILLUMINA	ss3641403219	Oct 11, 2018 (152)
66	ILLUMINA	ss3643234116	Oct 11, 2018 (152)
67	ILLUMINA	ss3652411968	Oct 11, 2018 (152)
68	EGCUT_WGS	ss3657605701	Jul 13, 2019 (153)
69	EVA_DECODE	ss3704042986	Jul 13, 2019 (153)
70	ILLUMINA	ss3725791686	Jul 13, 2019 (153)
71	ACPOP	ss3728498980	Jul 13, 2019 (153)
72	ILLUMINA	ss3745069615	Jul 13, 2019 (153)
73	EVA	ss3756855012	Jul 13, 2019 (153)
74	ILLUMINA	ss3772566419	Jul 13, 2019 (153)
75	KHV_HUMAN_GENOMES	ss3801222716	Jul 13, 2019 (153)
76	EVA	ss3827018666	Apr 25, 2020 (154)
77	SGDP_PRJ	ss3852427226	Apr 25, 2020 (154)
78	KRGDB	ss3897918233	Apr 25, 2020 (154)
79	KOGIC	ss3947902815	Apr 25, 2020 (154)
80	EVA	ss3984483660	Apr 26, 2021 (155)
81	EVA	ss3984898002	Apr 26, 2021 (155)
82	EVA	ss4016999965	Apr 26, 2021 (155)
83	TOPMED	ss4508559438	Apr 26, 2021 (155)
84	TOMMO_GENOMICS	ss5151718836	Apr 26, 2021 (155)
85	1000G_HIGH_COVERAGE	ss5248329272	Oct 12, 2022 (156)
86	EVA	ss5314741120	Oct 12, 2022 (156)
87	EVA	ss5329431060	Oct 12, 2022 (156)
88	HUGCELL_USP	ss5448507716	Oct 12, 2022 (156)
89	EVA	ss5506435374	Oct 12, 2022 (156)
90	1000G_HIGH_COVERAGE	ss5523696276	Oct 12, 2022 (156)
91	SANFORD_IMAGENETICS	ss5628891192	Oct 12, 2022 (156)
92	TOMMO_GENOMICS	ss5680443984	Oct 12, 2022 (156)
93	EVA	ss5799534290	Oct 12, 2022 (156)
94	YY_MCH	ss5802268887	Oct 12, 2022 (156)
95	EVA	ss5820200985	Oct 12, 2022 (156)
96	EVA	ss5847189165	Oct 12, 2022 (156)
97	EVA	ss5852551519	Oct 12, 2022 (156)
98	EVA	ss5930679152	Oct 12, 2022 (156)
99	EVA	ss5955132510	Oct 12, 2022 (156)
100	EVA	ss5979569205	Oct 12, 2022 (156)
101	1000Genomes	NC_000002.11 - 63511435	Oct 11, 2018 (152)
102	1000Genomes_30x	NC_000002.12 - 63284300	Oct 12, 2022 (156)
103	The Avon Longitudinal Study of Parents and Children	NC_000002.11 - 63511435	Oct 11, 2018 (152)
104	Genetic variation in the Estonian population	NC_000002.11 - 63511435	Oct 11, 2018 (152)
105	The Danish reference pan genome	NC_000002.11 - 63511435	Apr 25, 2020 (154)
106	gnomAD - Genomes	NC_000002.12 - 63284300	Apr 26, 2021 (155)
107	Genome of the Netherlands Release 5	NC_000002.11 - 63511435	Apr 25, 2020 (154)
108	HapMap	NC_000002.12 - 63284300	Apr 25, 2020 (154)
109	KOREAN population from KRGDB	NC_000002.11 - 63511435	Apr 25, 2020 (154)
110	Korean Genome Project	NC_000002.12 - 63284300	Apr 25, 2020 (154)
111	Northern Sweden	NC_000002.11 - 63511435	Jul 13, 2019 (153)
112	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000002.11 - 63511435	Apr 26, 2021 (155)
113	CNV burdens in cranial meningiomas	NC_000002.11 - 63511435	Apr 26, 2021 (155)
114	Qatari	NC_000002.11 - 63511435	Apr 25, 2020 (154)
115	SGDP_PRJ	NC_000002.11 - 63511435	Apr 25, 2020 (154)
116	Siberian	NC_000002.11 - 63511435	Apr 25, 2020 (154)
117	8.3KJPN	NC_000002.11 - 63511435	Apr 26, 2021 (155)
118	14KJPN	NC_000002.12 - 63284300	Oct 12, 2022 (156)
119	TopMed	NC_000002.12 - 63284300	Apr 26, 2021 (155)
120	UK 10K study - Twins	NC_000002.11 - 63511435	Oct 11, 2018 (152)
121	A Vietnamese Genetic Variation Database	NC_000002.11 - 63511435	Jul 13, 2019 (153)
122	ALFA	NC_000002.12 - 63284300	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57288497	May 23, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss82463331	NC_000002.9:63423085:G:T	NC_000002.12:63284299:G:T	(self)
ss117733779, ss166687575, ss200535350, ss205822223, ss276498977, ss480436206, ss1712461508, ss2635091410, ss3643234116	NC_000002.10:63364938:G:T	NC_000002.12:63284299:G:T	(self)
8511053, 4732829, 3343949, 5083469, 2079495, 5095627, 1783845, 123929, 32989, 2188634, 4444206, 1168406, 9688143, 4732829, 1026626, ss219288645, ss231199736, ss238746999, ss480449913, ss481238809, ss485015531, ss537043736, ss555615253, ss649203621, ss778482393, ss782954071, ss783916272, ss832210090, ss833938282, ss976917618, ss1069178916, ss1297556658, ss1428600893, ss1578912497, ss1603687731, ss1646681764, ss1752364792, ss1796851088, ss1920146704, ss1968788961, ss2020607134, ss2148652052, ss2624813802, ss2633624306, ss2703223080, ss2774390654, ss2985797694, ss2989629358, ss3021978113, ss3344263791, ss3628080429, ss3631590601, ss3633202992, ss3633914785, ss3634769700, ss3635600988, ss3636456494, ss3637352864, ss3638264440, ss3640477002, ss3641403219, ss3652411968, ss3657605701, ss3728498980, ss3745069615, ss3756855012, ss3772566419, ss3827018666, ss3852427226, ss3897918233, ss3984483660, ss3984898002, ss4016999965, ss5151718836, ss5314741120, ss5329431060, ss5506435374, ss5628891192, ss5799534290, ss5820200985, ss5847189165, ss5955132510, ss5979569205	NC_000002.11:63511434:G:T	NC_000002.12:63284299:G:T	(self)
11222211, 60460739, 1813929, 4280816, 14281088, 312382317, 4188725670, ss2230973134, ss3024070459, ss3704042986, ss3725791686, ss3801222716, ss3947902815, ss4508559438, ss5248329272, ss5448507716, ss5523696276, ss5680443984, ss5802268887, ss5852551519, ss5930679152	NC_000002.12:63284299:G:T	NC_000002.12:63284299:G:T	(self)
ss3065127, ss41641640, ss75173444, ss103509261, ss119418279, ss157148064, ss160506045, ss173135788	NT_022184.15:42333321:G:T	NC_000002.12:63284299:G:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs2138798

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs2138798