Name: rs17188113
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs17188113

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr6:30163346 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>G
Variation Type: SNV Single Nucleotide Variation
Frequency: G=0.120001 (31763/264690, TOPMED)
G=0.131237 (18391/140136, GnomAD)
G=0.12076 (9502/78682, PAGE_STUDY) (+ 19 more)
G=0.13585 (4622/34022, ALFA)
G=0.35841 (10128/28258, 14KJPN)
G=0.35984 (6031/16760, 8.3KJPN)
G=0.1671 (1070/6404, 1000G_30x)
G=0.1727 (865/5008, 1000G)
G=0.1705 (764/4480, Estonian)
G=0.1562 (602/3854, ALSPAC)
G=0.1588 (589/3708, TWINSUK)
G=0.2719 (796/2928, KOREAN)
G=0.2111 (239/1132, Daghestan)
G=0.166 (166/998, GoNL)
G=0.205 (123/600, NorthernSweden)
G=0.116 (25/216, Qatari)
T=0.400 (84/210, SGDP_PRJ)
G=0.399 (83/208, Vietnamese)
G=0.21 (16/78, Ancient Sardinia)
G=0.12 (5/40, GENOME_DK)
T=0.50 (12/24, Siberian)
G=0.50 (12/24, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TRIM10 : Intron Variant
TRIM15 : 2KB Upstream Variant
Publications: 1 citation
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	34022	T=0.86415	G=0.13585
European	Sub	24738	T=0.83855	G=0.16145
African	Sub	6218	T=0.9617	G=0.0383
African Others	Sub	208	T=0.995	G=0.005
African American	Sub	6010	T=0.9606	G=0.0394
Asian	Sub	128	T=0.711	G=0.289
East Asian	Sub	100	T=0.72	G=0.28
Other Asian	Sub	28	T=0.68	G=0.32
Latin American 1	Sub	168	T=0.911	G=0.089
Latin American 2	Sub	700	T=0.890	G=0.110
South Asian	Sub	114	T=0.807	G=0.193
Other	Sub	1956	T=0.8778	G=0.1222

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.879999	G=0.120001
gnomAD - Genomes	Global	Study-wide	140136	T=0.868763	G=0.131237
gnomAD - Genomes	European	Sub	75874	T=0.82111	G=0.17889
gnomAD - Genomes	African	Sub	42010	T=0.96277	G=0.03723
gnomAD - Genomes	American	Sub	13656	T=0.88474	G=0.11526
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	T=0.8660	G=0.1340
gnomAD - Genomes	East Asian	Sub	3124	T=0.6997	G=0.3003
gnomAD - Genomes	Other	Sub	2150	T=0.8619	G=0.1381
The PAGE Study	Global	Study-wide	78682	T=0.87924	G=0.12076
The PAGE Study	AfricanAmerican	Sub	32512	T=0.95814	G=0.04186
The PAGE Study	Mexican	Sub	10810	T=0.89269	G=0.10731
The PAGE Study	Asian	Sub	8314	T=0.6469	G=0.3531
The PAGE Study	PuertoRican	Sub	7916	T=0.9049	G=0.0951
The PAGE Study	NativeHawaiian	Sub	4534	T=0.6581	G=0.3419
The PAGE Study	Cuban	Sub	4228	T=0.8635	G=0.1365
The PAGE Study	Dominican	Sub	3826	T=0.9117	G=0.0883
The PAGE Study	CentralAmerican	Sub	2450	T=0.9041	G=0.0959
The PAGE Study	SouthAmerican	Sub	1982	T=0.8890	G=0.1110
The PAGE Study	NativeAmerican	Sub	1260	T=0.8571	G=0.1429
The PAGE Study	SouthAsian	Sub	850	T=0.774	G=0.226
Allele Frequency Aggregator	Total	Global	34022	T=0.86415	G=0.13585
Allele Frequency Aggregator	European	Sub	24738	T=0.83855	G=0.16145
Allele Frequency Aggregator	African	Sub	6218	T=0.9617	G=0.0383
Allele Frequency Aggregator	Other	Sub	1956	T=0.8778	G=0.1222
Allele Frequency Aggregator	Latin American 2	Sub	700	T=0.890	G=0.110
Allele Frequency Aggregator	Latin American 1	Sub	168	T=0.911	G=0.089
Allele Frequency Aggregator	Asian	Sub	128	T=0.711	G=0.289
Allele Frequency Aggregator	South Asian	Sub	114	T=0.807	G=0.193
14KJPN	JAPANESE	Study-wide	28258	T=0.64159	G=0.35841
8.3KJPN	JAPANESE	Study-wide	16760	T=0.64016	G=0.35984
1000Genomes_30x	Global	Study-wide	6404	T=0.8329	G=0.1671
1000Genomes_30x	African	Sub	1786	T=0.9910	G=0.0090
1000Genomes_30x	Europe	Sub	1266	T=0.8191	G=0.1809
1000Genomes_30x	South Asian	Sub	1202	T=0.7504	G=0.2496
1000Genomes_30x	East Asian	Sub	1170	T=0.6410	G=0.3590
1000Genomes_30x	American	Sub	980	T=0.893	G=0.107
1000Genomes	Global	Study-wide	5008	T=0.8273	G=0.1727
1000Genomes	African	Sub	1322	T=0.9887	G=0.0113
1000Genomes	East Asian	Sub	1008	T=0.6438	G=0.3562
1000Genomes	Europe	Sub	1006	T=0.8191	G=0.1809
1000Genomes	South Asian	Sub	978	T=0.755	G=0.245
1000Genomes	American	Sub	694	T=0.901	G=0.099
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.8295	G=0.1705
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.8438	G=0.1562
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.8412	G=0.1588
KOREAN population from KRGDB	KOREAN	Study-wide	2928	T=0.7281	G=0.2719
Genome-wide autozygosity in Daghestan	Global	Study-wide	1132	T=0.7889	G=0.2111
Genome-wide autozygosity in Daghestan	Daghestan	Sub	628	T=0.785	G=0.215
Genome-wide autozygosity in Daghestan	Near_East	Sub	142	T=0.789	G=0.211
Genome-wide autozygosity in Daghestan	Central Asia	Sub	122	T=0.861	G=0.139
Genome-wide autozygosity in Daghestan	Europe	Sub	106	T=0.736	G=0.264
Genome-wide autozygosity in Daghestan	South Asian	Sub	98	T=0.79	G=0.21
Genome-wide autozygosity in Daghestan	Caucasus	Sub	36	T=0.78	G=0.22
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.834	G=0.166
Northern Sweden	ACPOP	Study-wide	600	T=0.795	G=0.205
Qatari	Global	Study-wide	216	T=0.884	G=0.116
SGDP_PRJ	Global	Study-wide	210	T=0.400	G=0.600
A Vietnamese Genetic Variation Database	Global	Study-wide	208	T=0.601	G=0.399
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	78	T=0.79	G=0.21
The Danish reference pan genome	Danish	Study-wide	40	T=0.88	G=0.12
Siberian	Global	Study-wide	24	T=0.50	G=0.50

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 6	NC_000006.12:g.30163346T>G
GRCh37.p13 chr 6	NC_000006.11:g.30131123T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_COX_CTG1	NT_113891.3:g.1643144T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1	NT_113891.2:g.1643250T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_QBL_CTG1	NT_167248.2:g.1418474T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1	NT_167248.1:g.1424070T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_DBB_CTG1	NT_167245.2:g.1419247T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1	NT_167245.1:g.1424832T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1	NT_167249.2:g.1462277T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1	NT_167249.1:g.1461575T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MANN_CTG1	NT_167246.2:g.1474048T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1	NT_167246.1:g.1479668T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MCF_CTG1	NT_167247.2:g.1507419T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1	NT_167247.1:g.1513004T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_APD_CTG1	NT_167244.2:g.1421426T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_APD_CTG1	NT_167244.1:g.1371342T>G

Gene: TRIM10, tripartite motif containing 10 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TRIM10 transcript variant 1	NM_006778.4:c.	N/A	Genic Upstream Transcript Variant
TRIM10 transcript variant 2	NM_052828.3:c.	N/A	Genic Upstream Transcript Variant
TRIM10 transcript variant X6	XM_047418052.1:c.-1945-12… XM_047418052.1:c.-1945-120A>C	N/A	Intron Variant
TRIM10 transcript variant X4	XM_011514221.2:c.-400=	N/A	5 Prime UTR Variant
TRIM10 transcript variant X1	XM_011514222.3:c.-641=	N/A	5 Prime UTR Variant
TRIM10 transcript variant X5	XM_047418051.1:c.-2065=	N/A	5 Prime UTR Variant
TRIM10 transcript variant X2	XM_011514223.3:c.-522=	N/A	5 Prime UTR Variant
TRIM10 transcript variant X3	XM_047418053.1:c.-2065=	N/A	5 Prime UTR Variant

Gene: TRIM15, tripartite motif containing 15 (plus strand) : 2KB Upstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
TRIM15 transcript	NM_033229.3:c.	N/A	Upstream Transcript Variant
TRIM15 transcript variant X1	XM_011514987.2:c.	N/A	Upstream Transcript Variant
TRIM15 transcript variant X3	XM_047419503.1:c.	N/A	Upstream Transcript Variant
TRIM15 transcript variant X2	XM_011514988.3:c.	N/A	N/A

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	G
GRCh38.p14 chr 6	NC_000006.12:g.30163346=	NC_000006.12:g.30163346T>G
GRCh37.p13 chr 6	NC_000006.11:g.30131123=	NC_000006.11:g.30131123T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_COX_CTG1	NT_113891.3:g.1643144=	NT_113891.3:g.1643144T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1	NT_113891.2:g.1643250=	NT_113891.2:g.1643250T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_QBL_CTG1	NT_167248.2:g.1418474=	NT_167248.2:g.1418474T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1	NT_167248.1:g.1424070=	NT_167248.1:g.1424070T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_DBB_CTG1	NT_167245.2:g.1419247=	NT_167245.2:g.1419247T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1	NT_167245.1:g.1424832=	NT_167245.1:g.1424832T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1	NT_167249.2:g.1462277=	NT_167249.2:g.1462277T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1	NT_167249.1:g.1461575=	NT_167249.1:g.1461575T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MANN_CTG1	NT_167246.2:g.1474048=	NT_167246.2:g.1474048T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1	NT_167246.1:g.1479668=	NT_167246.1:g.1479668T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MCF_CTG1	NT_167247.2:g.1507419=	NT_167247.2:g.1507419T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1	NT_167247.1:g.1513004=	NT_167247.1:g.1513004T>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_APD_CTG1	NT_167244.2:g.1421426=	NT_167244.2:g.1421426T>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_APD_CTG1	NT_167244.1:g.1371342=	NT_167244.1:g.1371342T>G
TRIM10 transcript variant X1	XM_011514222.3:c.-641=	XM_011514222.3:c.-641A>C
TRIM10 transcript variant X2	XM_011514223.3:c.-522=	XM_011514223.3:c.-522A>C
TRIM10 transcript variant X4	XM_011514221.2:c.-400=	XM_011514221.2:c.-400A>C
TRIM15 transcript	NM_033229.2:c.-339=	NM_033229.2:c.-339T>G
TRIM10 transcript variant X3	XM_047418053.1:c.-2065=	XM_047418053.1:c.-2065A>C
TRIM10 transcript variant X5	XM_047418051.1:c.-2065=	XM_047418051.1:c.-2065A>C
TRIM10 transcript variant X6	XM_047418052.1:c.-1945-120=	XM_047418052.1:c.-1945-120A>C

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

90 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	FHCRC	ss23136011	Sep 20, 2004 (123)
2	HGSV	ss77722626	Dec 07, 2007 (129)
3	HGSV	ss83959877	Dec 14, 2007 (130)
4	BCMHGSC_JDW	ss93432734	Mar 24, 2008 (129)
5	BGI	ss104293559	Dec 01, 2009 (131)
6	1000GENOMES	ss109880019	Feb 13, 2009 (137)
7	GMI	ss156708130	Dec 01, 2009 (131)
8	1000GENOMES	ss233387165	Jul 14, 2010 (137)
9	1000GENOMES	ss240458902	Jul 15, 2010 (137)
10	GMI	ss278714442	May 04, 2012 (137)
11	GMI	ss285368792	Apr 25, 2013 (138)
12	ILLUMINA	ss479212926	May 04, 2012 (137)
13	ILLUMINA	ss485225764	May 04, 2012 (137)
14	ILLUMINA	ss532800419	Sep 08, 2015 (146)
15	TISHKOFF	ss559101825	Apr 25, 2013 (138)
16	SSMP	ss653018987	Apr 25, 2013 (138)
17	ILLUMINA	ss779474328	Sep 08, 2015 (146)
18	ILLUMINA	ss780925281	Sep 08, 2015 (146)
19	ILLUMINA	ss834944264	Sep 08, 2015 (146)
20	EVA-GONL	ss982744482	Aug 21, 2014 (142)
21	JMKIDD_LAB	ss1073492748	Aug 21, 2014 (142)
22	1000GENOMES	ss1319512445	Aug 21, 2014 (142)
23	HAMMER_LAB	ss1397447641	Sep 08, 2015 (146)
24	EVA_GENOME_DK	ss1581596311	Apr 01, 2015 (144)
25	EVA_DECODE	ss1592291860	Apr 01, 2015 (144)
26	EVA_UK10K_ALSPAC	ss1615251126	Apr 01, 2015 (144)
27	EVA_UK10K_TWINSUK	ss1658245159	Apr 01, 2015 (144)
28	WEILL_CORNELL_DGM	ss1925996663	Feb 12, 2016 (147)
29	ILLUMINA	ss1958881414	Feb 12, 2016 (147)
30	ILLUMINA	ss1958881416	Feb 12, 2016 (147)
31	GENOMED	ss1970350420	Jul 19, 2016 (147)
32	JJLAB	ss2023626725	Sep 14, 2016 (149)
33	ILLUMINA	ss2094952431	Dec 20, 2016 (150)
34	ILLUMINA	ss2095174692	Dec 20, 2016 (150)
35	USC_VALOUEV	ss2151792011	Nov 08, 2017 (151)
36	HUMAN_LONGEVITY	ss2282872889	Dec 20, 2016 (150)
37	SYSTEMSBIOZJU	ss2626299427	Nov 08, 2017 (151)
38	ILLUMINA	ss2634424443	Nov 08, 2017 (151)
39	GRF	ss2707384082	Nov 08, 2017 (151)
40	GNOMAD	ss2837313501	Nov 08, 2017 (151)
41	SWEGEN	ss2998765649	Nov 08, 2017 (151)
42	ILLUMINA	ss3022593121	Nov 08, 2017 (151)
43	ILLUMINA	ss3022593122	Nov 08, 2017 (151)
44	BIOINF_KMB_FNS_UNIBA	ss3025598511	Nov 08, 2017 (151)
45	ILLUMINA	ss3629492512	Oct 12, 2018 (152)
46	ILLUMINA	ss3632343639	Oct 12, 2018 (152)
47	OMUKHERJEE_ADBS	ss3646333163	Oct 12, 2018 (152)
48	ILLUMINA	ss3653104136	Oct 12, 2018 (152)
49	ILLUMINA	ss3653104137	Oct 12, 2018 (152)
50	EGCUT_WGS	ss3666688106	Jul 13, 2019 (153)
51	EVA_DECODE	ss3716876044	Jul 13, 2019 (153)
52	ILLUMINA	ss3726325692	Jul 13, 2019 (153)
53	ACPOP	ss3733340510	Jul 13, 2019 (153)
54	EVA	ss3764799226	Jul 13, 2019 (153)
55	PAGE_CC	ss3771275089	Jul 13, 2019 (153)
56	KHV_HUMAN_GENOMES	ss3807954783	Jul 13, 2019 (153)
57	EVA	ss3825693103	Apr 26, 2020 (154)
58	EVA	ss3829817415	Apr 26, 2020 (154)
59	EVA	ss3838385896	Apr 26, 2020 (154)
60	EVA	ss3843827219	Apr 26, 2020 (154)
61	SGDP_PRJ	ss3864220287	Apr 26, 2020 (154)
62	KRGDB	ss3910994959	Apr 26, 2020 (154)
63	EVA	ss3985210528	Apr 26, 2021 (155)
64	EVA	ss3986034198	Apr 26, 2021 (155)
65	VINODS	ss4025169878	Apr 26, 2021 (155)
66	VINODS	ss4025180519	Apr 26, 2021 (155)
67	VINODS	ss4025203420	Apr 26, 2021 (155)
68	VINODS	ss4025222607	Apr 26, 2021 (155)
69	VINODS	ss4025242661	Apr 26, 2021 (155)
70	VINODS	ss4025259790	Apr 26, 2021 (155)
71	VINODS	ss4025281132	Apr 26, 2021 (155)
72	TOPMED	ss4698102723	Apr 26, 2021 (155)
73	TOMMO_GENOMICS	ss5176781986	Apr 26, 2021 (155)
74	EVA	ss5237392651	Apr 26, 2021 (155)
75	1000G_HIGH_COVERAGE	ss5267893261	Oct 13, 2022 (156)
76	EVA	ss5315138270	Oct 13, 2022 (156)
77	EVA	ss5364661014	Oct 13, 2022 (156)
78	HUGCELL_USP	ss5465634620	Oct 13, 2022 (156)
79	1000G_HIGH_COVERAGE	ss5553537145	Oct 13, 2022 (156)
80	SANFORD_IMAGENETICS	ss5624620852	Oct 13, 2022 (156)
81	SANFORD_IMAGENETICS	ss5640057958	Oct 13, 2022 (156)
82	TOMMO_GENOMICS	ss5714621432	Oct 13, 2022 (156)
83	YY_MCH	ss5807285703	Oct 13, 2022 (156)
84	EVA	ss5842000554	Oct 13, 2022 (156)
85	EVA	ss5847288525	Oct 13, 2022 (156)
86	EVA	ss5848087330	Oct 13, 2022 (156)
87	EVA	ss5855271265	Oct 13, 2022 (156)
88	EVA	ss5883200375	Oct 13, 2022 (156)
89	EVA	ss5968561335	Oct 13, 2022 (156)
90	EVA	ss5979776933	Oct 13, 2022 (156)
91	1000Genomes	NC_000006.11 - 30131123	Oct 12, 2018 (152)
92	1000Genomes_30x	NC_000006.12 - 30163346	Oct 13, 2022 (156)
93	The Avon Longitudinal Study of Parents and Children	NC_000006.11 - 30131123	Oct 12, 2018 (152)
94	Genome-wide autozygosity in Daghestan	NC_000006.10 - 30239102	Apr 26, 2020 (154)
95	Genetic variation in the Estonian population	NC_000006.11 - 30131123	Oct 12, 2018 (152)
96	The Danish reference pan genome	NC_000006.11 - 30131123	Apr 26, 2020 (154)
97	gnomAD - Genomes	NC_000006.12 - 30163346	Apr 26, 2021 (155)
98	Genome of the Netherlands Release 5	NC_000006.11 - 30131123	Apr 26, 2020 (154)
99	KOREAN population from KRGDB	NC_000006.11 - 30131123	Apr 26, 2020 (154)
100	Northern Sweden	NC_000006.11 - 30131123	Jul 13, 2019 (153)
101	The PAGE Study	NC_000006.12 - 30163346	Jul 13, 2019 (153)
102	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000006.11 - 30131123	Apr 26, 2021 (155)
103	Qatari	NC_000006.11 - 30131123	Apr 26, 2020 (154)
104	SGDP_PRJ	NC_000006.11 - 30131123	Apr 26, 2020 (154)
105	Siberian	NC_000006.11 - 30131123	Apr 26, 2020 (154)
106	8.3KJPN	NC_000006.11 - 30131123	Apr 26, 2021 (155)
107	14KJPN	NC_000006.12 - 30163346	Oct 13, 2022 (156)
108	TopMed	NC_000006.12 - 30163346	Apr 26, 2021 (155)
109	UK 10K study - Twins	NC_000006.11 - 30131123	Oct 12, 2018 (152)
110	A Vietnamese Genetic Variation Database	NC_000006.11 - 30131123	Jul 13, 2019 (153)
111	ALFA	NC_000006.12 - 30163346	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57024443	May 23, 2008 (130)
rs114447669	May 04, 2012 (137)
rs117154075	Aug 16, 2010 (132)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss77722626, ss83959877	NC_000006.9:30239101:T:G	NC_000006.12:30163345:T:G	(self)
422294, ss93432734, ss109880019, ss278714442, ss285368792, ss485225764, ss1397447641, ss1592291860, ss2094952431	NC_000006.10:30239101:T:G	NC_000006.12:30163345:T:G	(self)
31277863, 17437569, 12426354, 7761250, 7744541, 18172353, 6625375, 436455, 8038593, 16237267, 4308365, 34751293, 17437569, 3863292, ss233387165, ss240458902, ss479212926, ss532800419, ss559101825, ss653018987, ss779474328, ss780925281, ss834944264, ss982744482, ss1073492748, ss1319512445, ss1581596311, ss1615251126, ss1658245159, ss1925996663, ss1958881414, ss1958881416, ss1970350420, ss2023626725, ss2095174692, ss2151792011, ss2626299427, ss2634424443, ss2707384082, ss2837313501, ss2998765649, ss3022593121, ss3022593122, ss3629492512, ss3632343639, ss3646333163, ss3653104136, ss3653104137, ss3666688106, ss3733340510, ss3764799226, ss3825693103, ss3829817415, ss3838385896, ss3864220287, ss3910994959, ss3985210528, ss3986034198, ss5176781986, ss5237392651, ss5315138270, ss5364661014, ss5624620852, ss5640057958, ss5842000554, ss5847288525, ss5848087330, ss5968561335, ss5979776933	NC_000006.11:30131122:T:G	NC_000006.12:30163345:T:G	(self)
41063080, 220950842, 496558, 48458536, 535480281, 6603743602, ss2282872889, ss3025598511, ss3716876044, ss3726325692, ss3771275089, ss3807954783, ss3843827219, ss4698102723, ss5267893261, ss5465634620, ss5553537145, ss5714621432, ss5807285703, ss5855271265, ss5883200375	NC_000006.12:30163345:T:G	NC_000006.12:30163345:T:G	(self)
ss23136011, ss104293559, ss156708130	NT_007592.15:30071122:T:G	NC_000006.12:30163345:T:G	(self)
ss4025180519	NT_113891.3:1643143:T:G	NC_000006.12:30163345:T:G	(self)
ss4025169878	NT_167244.2:1421425:T:G	NC_000006.12:30163345:T:G	(self)
ss4025203420	NT_167245.2:1419246:T:G	NC_000006.12:30163345:T:G	(self)
ss4025222607	NT_167246.2:1474047:T:G	NC_000006.12:30163345:T:G	(self)
ss4025242661	NT_167247.2:1507418:T:G	NC_000006.12:30163345:T:G	(self)
ss4025259790	NT_167248.2:1418473:T:G	NC_000006.12:30163345:T:G	(self)
ss4025281132	NT_167249.2:1462276:T:G	NC_000006.12:30163345:T:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs17188113

PMID	Title	Author	Year	Journal
29562276	Enhanced Contribution of HLA in Pediatric Onset Ulcerative Colitis.	Venkateswaran S et al.	2018	Inflammatory bowel diseases

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs17188113