Name: rs170364
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs170364

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr16:57376022 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>G
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.275700 (72975/264690, TOPMED)
T=0.260957 (36557/140088, GnomAD)
T=0.25433 (20427/80318, ALFA) (+ 20 more)
T=0.36195 (10228/28258, 14KJPN)
T=0.36432 (6106/16760, 8.3KJPN)
T=0.2808 (1798/6404, 1000G_30x)
T=0.2782 (1393/5008, 1000G)
T=0.1942 (870/4480, Estonian)
T=0.2600 (1002/3854, ALSPAC)
T=0.2554 (947/3708, TWINSUK)
T=0.3447 (1010/2930, KOREAN)
T=0.2855 (595/2084, HGDP_Stanford)
T=0.2831 (534/1886, HapMap)
T=0.3324 (609/1832, Korea1K)
T=0.244 (244/998, GoNL)
T=0.342 (271/792, PRJEB37584)
T=0.237 (142/600, NorthernSweden)
T=0.213 (107/502, SGDP_PRJ)
T=0.319 (69/216, Qatari)
T=0.231 (49/212, Vietnamese)
T=0.17 (10/58, Ancient Sardinia)
T=0.21 (10/48, Siberian)
T=0.20 (8/40, GENOME_DK)

Clinical Significance: Reported in ClinVar
Gene : Consequence: CX3CL1 : Intron Variant
Publications: 4 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	80318	T=0.25433	G=0.74567
European	Sub	63862	T=0.24197	G=0.75803
African	Sub	7338	T=0.2931	G=0.7069
African Others	Sub	264	T=0.280	G=0.720
African American	Sub	7074	T=0.2936	G=0.7064
Asian	Sub	202	T=0.262	G=0.738
East Asian	Sub	160	T=0.244	G=0.756
Other Asian	Sub	42	T=0.33	G=0.67
Latin American 1	Sub	268	T=0.291	G=0.709
Latin American 2	Sub	1316	T=0.3381	G=0.6619
South Asian	Sub	4970	T=0.3189	G=0.6811
Other	Sub	2362	T=0.2803	G=0.7197

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.275700	G=0.724300
gnomAD - Genomes	Global	Study-wide	140088	T=0.260957	G=0.739043
gnomAD - Genomes	European	Sub	75894	T=0.23188	G=0.76812
gnomAD - Genomes	African	Sub	41958	T=0.30109	G=0.69891
gnomAD - Genomes	American	Sub	13646	T=0.29936	G=0.70064
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	T=0.2541	G=0.7459
gnomAD - Genomes	East Asian	Sub	3122	T=0.2611	G=0.7389
gnomAD - Genomes	Other	Sub	2146	T=0.2712	G=0.7288
Allele Frequency Aggregator	Total	Global	80318	T=0.25433	G=0.74567
Allele Frequency Aggregator	European	Sub	63862	T=0.24197	G=0.75803
Allele Frequency Aggregator	African	Sub	7338	T=0.2931	G=0.7069
Allele Frequency Aggregator	South Asian	Sub	4970	T=0.3189	G=0.6811
Allele Frequency Aggregator	Other	Sub	2362	T=0.2803	G=0.7197
Allele Frequency Aggregator	Latin American 2	Sub	1316	T=0.3381	G=0.6619
Allele Frequency Aggregator	Latin American 1	Sub	268	T=0.291	G=0.709
Allele Frequency Aggregator	Asian	Sub	202	T=0.262	G=0.738
14KJPN	JAPANESE	Study-wide	28258	T=0.36195	G=0.63805
8.3KJPN	JAPANESE	Study-wide	16760	T=0.36432	G=0.63568
1000Genomes_30x	Global	Study-wide	6404	T=0.2808	G=0.7192
1000Genomes_30x	African	Sub	1786	T=0.3024	G=0.6976
1000Genomes_30x	Europe	Sub	1266	T=0.2259	G=0.7741
1000Genomes_30x	South Asian	Sub	1202	T=0.2962	G=0.7038
1000Genomes_30x	East Asian	Sub	1170	T=0.2581	G=0.7419
1000Genomes_30x	American	Sub	980	T=0.320	G=0.680
1000Genomes	Global	Study-wide	5008	T=0.2782	G=0.7218
1000Genomes	African	Sub	1322	T=0.3064	G=0.6936
1000Genomes	East Asian	Sub	1008	T=0.2589	G=0.7411
1000Genomes	Europe	Sub	1006	T=0.2177	G=0.7823
1000Genomes	South Asian	Sub	978	T=0.304	G=0.696
1000Genomes	American	Sub	694	T=0.304	G=0.696
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.1942	G=0.8058
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.2600	G=0.7400
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.2554	G=0.7446
KOREAN population from KRGDB	KOREAN	Study-wide	2930	T=0.3447	G=0.6553
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	T=0.2855	G=0.7145
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	T=0.296	G=0.704
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	T=0.345	G=0.655
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	T=0.251	G=0.749
HGDP-CEPH-db Supplement 1	Europe	Sub	320	T=0.194	G=0.806
HGDP-CEPH-db Supplement 1	Africa	Sub	242	T=0.310	G=0.690
HGDP-CEPH-db Supplement 1	America	Sub	216	T=0.375	G=0.625
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	T=0.10	G=0.90
HapMap	Global	Study-wide	1886	T=0.2831	G=0.7169
HapMap	American	Sub	770	T=0.270	G=0.730
HapMap	African	Sub	688	T=0.305	G=0.695
HapMap	Asian	Sub	252	T=0.290	G=0.710
HapMap	Europe	Sub	176	T=0.244	G=0.756
Korean Genome Project	KOREAN	Study-wide	1832	T=0.3324	G=0.6676
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.244	G=0.756
CNV burdens in cranial meningiomas	Global	Study-wide	792	T=0.342	G=0.658
CNV burdens in cranial meningiomas	CRM	Sub	792	T=0.342	G=0.658
Northern Sweden	ACPOP	Study-wide	600	T=0.237	G=0.763
SGDP_PRJ	Global	Study-wide	502	T=0.213	G=0.787
Qatari	Global	Study-wide	216	T=0.319	G=0.681
A Vietnamese Genetic Variation Database	Global	Study-wide	212	T=0.231	G=0.769
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	58	T=0.17	G=0.83
Siberian	Global	Study-wide	48	T=0.21	G=0.79
The Danish reference pan genome	Danish	Study-wide	40	T=0.20	G=0.80

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 16	NC_000016.10:g.57376022T>G
GRCh37.p13 chr 16	NC_000016.9:g.57409934T>G

Gene: CX3CL1, C-X3-C motif chemokine ligand 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
CX3CL1 transcript variant 2	NM_001304392.3:c.-65+3384… NM_001304392.3:c.-65+3384T>G	N/A	Intron Variant
CX3CL1 transcript variant 1	NM_002996.6:c.70+3384T>G	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: G (allele ID: 1250319 )

ClinVar Accession	Disease Names	Clinical Significance
RCV001673932.2	not provided	Benign

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	G
GRCh38.p14 chr 16	NC_000016.10:g.57376022=	NC_000016.10:g.57376022T>G
GRCh37.p13 chr 16	NC_000016.9:g.57409934=	NC_000016.9:g.57409934T>G
CX3CL1 transcript variant 2	NM_001304392.3:c.-65+3384=	NM_001304392.3:c.-65+3384T>G
CX3CL1 transcript	NM_002996.3:c.70+3384=	NM_002996.3:c.70+3384T>G
CX3CL1 transcript variant 1	NM_002996.6:c.70+3384=	NM_002996.6:c.70+3384T>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

119 SubSNP, 23 Frequency, 1 ClinVar submissions

No	Submitter	Submission ID	Date (Build)
1	KWOK	ss227035	Jul 12, 2000 (79)
2	SC_JCM	ss482582	Jul 16, 2000 (80)
3	KWOK	ss1012095	Oct 04, 2000 (86)
4	KWOK	ss1982514	Oct 18, 2000 (92)
5	KWOK	ss2039249	Oct 18, 2000 (87)
6	BCM_SSAHASNP	ss14272529	Dec 05, 2003 (119)
7	CSHL-HAPMAP	ss17573606	Feb 27, 2004 (120)
8	SSAHASNP	ss21362231	Apr 05, 2004 (121)
9	ABI	ss43915843	Mar 15, 2006 (126)
10	ILLUMINA	ss66608833	Dec 02, 2006 (127)
11	ILLUMINA	ss67169540	Dec 02, 2006 (127)
12	ILLUMINA	ss67523979	Dec 02, 2006 (127)
13	PERLEGEN	ss69345541	May 18, 2007 (127)
14	ILLUMINA	ss70449910	May 18, 2007 (127)
15	ILLUMINA	ss70650845	May 25, 2008 (130)
16	ILLUMINA	ss71208017	May 18, 2007 (127)
17	ILLUMINA	ss75447789	Dec 06, 2007 (129)
18	HGSV	ss77659802	Dec 06, 2007 (129)
19	HGSV	ss80329476	Dec 15, 2007 (130)
20	KRIBB_YJKIM	ss83375548	Dec 15, 2007 (130)
21	HGSV	ss84533304	Dec 15, 2007 (130)
22	BGI	ss106474227	Feb 05, 2009 (130)
23	1000GENOMES	ss109353107	Jan 24, 2009 (130)
24	1000GENOMES	ss115145909	Jan 25, 2009 (130)
25	ILLUMINA-UK	ss118266738	Feb 14, 2009 (130)
26	ILLUMINA	ss121782894	Dec 01, 2009 (131)
27	ILLUMINA	ss153605766	Dec 01, 2009 (131)
28	GMI	ss157399710	Dec 01, 2009 (131)
29	ILLUMINA	ss159304214	Dec 01, 2009 (131)
30	ENSEMBL	ss161786042	Dec 01, 2009 (131)
31	COMPLETE_GENOMICS	ss168281799	Jul 04, 2010 (132)
32	COMPLETE_GENOMICS	ss169839075	Jul 04, 2010 (132)
33	ILLUMINA	ss170738876	Jul 04, 2010 (132)
34	COMPLETE_GENOMICS	ss171295704	Jul 04, 2010 (132)
35	ILLUMINA	ss172716461	Jul 04, 2010 (132)
36	BUSHMAN	ss201745059	Jul 04, 2010 (132)
37	BCM-HGSC-SUB	ss207620428	Jul 04, 2010 (132)
38	1000GENOMES	ss227263574	Jul 14, 2010 (132)
39	1000GENOMES	ss237040776	Jul 15, 2010 (132)
40	1000GENOMES	ss243377586	Jul 15, 2010 (132)
41	BL	ss255732509	May 09, 2011 (134)
42	GMI	ss282547736	May 04, 2012 (137)
43	GMI	ss287082265	Apr 25, 2013 (138)
44	PJP	ss291850990	May 09, 2011 (134)
45	ILLUMINA	ss479366905	May 04, 2012 (137)
46	ILLUMINA	ss483522492	May 04, 2012 (137)
47	ILLUMINA	ss532929141	Sep 08, 2015 (146)
48	TISHKOFF	ss564924010	Apr 25, 2013 (138)
49	SSMP	ss660698245	Apr 25, 2013 (138)
50	ILLUMINA	ss779573430	Sep 08, 2015 (146)
51	ILLUMINA	ss780963724	Sep 08, 2015 (146)
52	ILLUMINA	ss825418643	Apr 01, 2015 (144)
53	ILLUMINA	ss832816295	Aug 21, 2014 (142)
54	ILLUMINA	ss833407125	Aug 21, 2014 (142)
55	ILLUMINA	ss835044807	Sep 08, 2015 (146)
56	EVA-GONL	ss992529244	Aug 21, 2014 (142)
57	JMKIDD_LAB	ss1080653180	Aug 21, 2014 (142)
58	1000GENOMES	ss1356401570	Aug 21, 2014 (142)
59	DDI	ss1427859381	Apr 01, 2015 (144)
60	EVA_GENOME_DK	ss1577929956	Apr 01, 2015 (144)
61	EVA_UK10K_ALSPAC	ss1634506031	Apr 01, 2015 (144)
62	EVA_UK10K_TWINSUK	ss1677500064	Apr 01, 2015 (144)
63	EVA_DECODE	ss1696563856	Apr 01, 2015 (144)
64	EVA_SVP	ss1713542239	Apr 01, 2015 (144)
65	HAMMER_LAB	ss1808530567	Sep 08, 2015 (146)
66	WEILL_CORNELL_DGM	ss1935965319	Feb 12, 2016 (147)
67	GENOMED	ss1968271132	Jul 19, 2016 (147)
68	JJLAB	ss2028766363	Sep 14, 2016 (149)
69	USC_VALOUEV	ss2157203046	Dec 20, 2016 (150)
70	HUMAN_LONGEVITY	ss2212471173	Dec 20, 2016 (150)
71	SYSTEMSBIOZJU	ss2628874860	Nov 08, 2017 (151)
72	ILLUMINA	ss2633323254	Nov 08, 2017 (151)
73	GRF	ss2701727848	Nov 08, 2017 (151)
74	GNOMAD	ss2943448226	Nov 08, 2017 (151)
75	SWEGEN	ss3014576224	Nov 08, 2017 (151)
76	BIOINF_KMB_FNS_UNIBA	ss3028201784	Nov 08, 2017 (151)
77	CSHL	ss3351470127	Nov 08, 2017 (151)
78	ILLUMINA	ss3627532726	Oct 12, 2018 (152)
79	ILLUMINA	ss3631309380	Oct 12, 2018 (152)
80	ILLUMINA	ss3638127497	Oct 12, 2018 (152)
81	ILLUMINA	ss3639075061	Oct 12, 2018 (152)
82	ILLUMINA	ss3639543763	Oct 12, 2018 (152)
83	ILLUMINA	ss3641072596	Oct 12, 2018 (152)
84	ILLUMINA	ss3641368054	Oct 12, 2018 (152)
85	ILLUMINA	ss3641957565	Oct 12, 2018 (152)
86	ILLUMINA	ss3643108491	Oct 12, 2018 (152)
87	EGCUT_WGS	ss3681551848	Jul 13, 2019 (153)
88	EVA_DECODE	ss3699339848	Jul 13, 2019 (153)
89	ACPOP	ss3741545121	Jul 13, 2019 (153)
90	EVA	ss3753986321	Jul 13, 2019 (153)
91	PACBIO	ss3788050837	Jul 13, 2019 (153)
92	PACBIO	ss3793031992	Jul 13, 2019 (153)
93	PACBIO	ss3797916981	Jul 13, 2019 (153)
94	KHV_HUMAN_GENOMES	ss3819273058	Jul 13, 2019 (153)
95	EVA	ss3834589794	Apr 27, 2020 (154)
96	EVA	ss3840900611	Apr 27, 2020 (154)
97	EVA	ss3846392565	Apr 27, 2020 (154)
98	HGDP	ss3847546483	Apr 27, 2020 (154)
99	SGDP_PRJ	ss3884518970	Apr 27, 2020 (154)
100	KRGDB	ss3934012141	Apr 27, 2020 (154)
101	KOGIC	ss3977664209	Apr 27, 2020 (154)
102	EVA	ss3984713570	Apr 26, 2021 (155)
103	EVA	ss3985759276	Apr 26, 2021 (155)
104	EVA	ss4017738178	Apr 26, 2021 (155)
105	TOPMED	ss5016720977	Apr 26, 2021 (155)
106	TOMMO_GENOMICS	ss5219747374	Apr 26, 2021 (155)
107	1000G_HIGH_COVERAGE	ss5301094630	Oct 16, 2022 (156)
108	EVA	ss5315841119	Oct 16, 2022 (156)
109	EVA	ss5423962337	Oct 16, 2022 (156)
110	HUGCELL_USP	ss5494433887	Oct 16, 2022 (156)
111	EVA	ss5511621635	Oct 16, 2022 (156)
112	1000G_HIGH_COVERAGE	ss5603811912	Oct 16, 2022 (156)
113	SANFORD_IMAGENETICS	ss5658980930	Oct 16, 2022 (156)
114	TOMMO_GENOMICS	ss5774807513	Oct 16, 2022 (156)
115	YY_MCH	ss5816007498	Oct 16, 2022 (156)
116	EVA	ss5846462537	Oct 16, 2022 (156)
117	EVA	ss5851583047	Oct 16, 2022 (156)
118	EVA	ss5899256539	Oct 16, 2022 (156)
119	EVA	ss5950375746	Oct 16, 2022 (156)
120	1000Genomes	NC_000016.9 - 57409934	Oct 12, 2018 (152)
121	1000Genomes_30x	NC_000016.10 - 57376022	Oct 16, 2022 (156)
122	The Avon Longitudinal Study of Parents and Children	NC_000016.9 - 57409934	Oct 12, 2018 (152)
123	Genetic variation in the Estonian population	NC_000016.9 - 57409934	Oct 12, 2018 (152)
124	The Danish reference pan genome	NC_000016.9 - 57409934	Apr 27, 2020 (154)
125	gnomAD - Genomes	NC_000016.10 - 57376022	Apr 26, 2021 (155)
126	Genome of the Netherlands Release 5	NC_000016.9 - 57409934	Apr 27, 2020 (154)
127	HGDP-CEPH-db Supplement 1	NC_000016.8 - 55967435	Apr 27, 2020 (154)
128	HapMap	NC_000016.10 - 57376022	Apr 27, 2020 (154)
129	KOREAN population from KRGDB	NC_000016.9 - 57409934	Apr 27, 2020 (154)
130	Korean Genome Project	NC_000016.10 - 57376022	Apr 27, 2020 (154)
131	Northern Sweden	NC_000016.9 - 57409934	Jul 13, 2019 (153)
132	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000016.9 - 57409934	Apr 26, 2021 (155)
133	CNV burdens in cranial meningiomas	NC_000016.9 - 57409934	Apr 26, 2021 (155)
134	Qatari	NC_000016.9 - 57409934	Apr 27, 2020 (154)
135	SGDP_PRJ	NC_000016.9 - 57409934	Apr 27, 2020 (154)
136	Siberian	NC_000016.9 - 57409934	Apr 27, 2020 (154)
137	8.3KJPN	NC_000016.9 - 57409934	Apr 26, 2021 (155)
138	14KJPN	NC_000016.10 - 57376022	Oct 16, 2022 (156)
139	TopMed	NC_000016.10 - 57376022	Apr 26, 2021 (155)
140	UK 10K study - Twins	NC_000016.9 - 57409934	Oct 12, 2018 (152)
141	A Vietnamese Genetic Variation Database	NC_000016.9 - 57409934	Jul 13, 2019 (153)
142	ALFA	NC_000016.10 - 57376022	Apr 26, 2021 (155)
143	ClinVar	RCV001673932.2	Oct 16, 2022 (156)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs1273573	Jan 18, 2001 (92)
rs58977514	May 25, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
224375, ss77659802, ss80329476, ss84533304, ss109353107, ss115145909, ss118266738, ss168281799, ss169839075, ss171295704, ss201745059, ss207620428, ss255732509, ss282547736, ss287082265, ss291850990, ss483522492, ss825418643, ss1696563856, ss1713542239, ss3639075061, ss3639543763, ss3643108491, ss3847546483	NC_000016.8:55967434:T:G	NC_000016.10:57376021:T:G	(self)
69569084, 38590182, 27290096, 4141832, 17208429, 41189535, 14829986, 985203, 263107, 18007241, 36535950, 9719400, 77716681, 38590182, 8561741, ss227263574, ss237040776, ss243377586, ss479366905, ss532929141, ss564924010, ss660698245, ss779573430, ss780963724, ss832816295, ss833407125, ss835044807, ss992529244, ss1080653180, ss1356401570, ss1427859381, ss1577929956, ss1634506031, ss1677500064, ss1808530567, ss1935965319, ss1968271132, ss2028766363, ss2157203046, ss2628874860, ss2633323254, ss2701727848, ss2943448226, ss3014576224, ss3351470127, ss3627532726, ss3631309380, ss3638127497, ss3641072596, ss3641368054, ss3641957565, ss3681551848, ss3741545121, ss3753986321, ss3788050837, ss3793031992, ss3797916981, ss3834589794, ss3840900611, ss3884518970, ss3934012141, ss3984713570, ss3985759276, ss4017738178, ss5219747374, ss5315841119, ss5423962337, ss5511621635, ss5658980930, ss5846462537, ss5950375746	NC_000016.9:57409933:T:G	NC_000016.10:57376021:T:G	(self)
RCV001673932.2, 91337847, 490684847, 1390175, 34042210, 108644617, 232266638, 7914817989, ss2212471173, ss3028201784, ss3699339848, ss3819273058, ss3846392565, ss3977664209, ss5016720977, ss5301094630, ss5494433887, ss5603811912, ss5774807513, ss5816007498, ss5851583047, ss5899256539	NC_000016.10:57376021:T:G	NC_000016.10:57376021:T:G	(self)
ss14272529, ss17573606, ss21362231	NT_010498.14:6130646:T:G	NC_000016.10:57376021:T:G	(self)
ss227035, ss482582, ss1012095, ss1982514, ss2039249, ss43915843, ss66608833, ss67169540, ss67523979, ss69345541, ss70449910, ss70650845, ss71208017, ss75447789, ss83375548, ss106474227, ss121782894, ss153605766, ss157399710, ss159304214, ss161786042, ss170738876, ss172716461	NT_010498.15:11024132:T:G	NC_000016.10:57376021:T:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

4 citations for rs170364

PMID	Title	Author	Year	Journal
25383745	HIV-infection, atherosclerosis and the inflammatory pathway: candidate gene study in a Spanish HIV-infected population.	Ibáñez L et al.	2014	PloS one
25845619	Chemokine CX3CL1 and its receptor CX3CR1 are associated with human atherosclerotic lesion volnerability.	Zhang X et al.	2015	Thrombosis research
32234515	CX3CL1 rs170364 gene polymorphism has a protective effect against major depression by enhancing its transcriptional activity.	Peng Q et al.	2020	Brain research
34091786	The Relationship Between Chemokine and Chemokine Receptor Genes Polymorphisms and Chronic Obstructive Pulmonary Disease Susceptibility in Tatar Population from Russia: A Case Control Study.	Korytina GF et al.	2022	Biochemical genetics

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs170364