Name: rs1124376
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1124376

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:20067054 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.137210 (36318/264690, TOPMED)
T=0.196670 (37883/192622, ALFA)
T=0.149159 (20890/140052, GnomAD) (+ 21 more)
T=0.01037 (293/28258, 14KJPN)
T=0.01062 (178/16760, 8.3KJPN)
T=0.0818 (524/6404, 1000G_30x)
T=0.0831 (416/5008, 1000G)
T=0.2018 (904/4480, Estonian)
T=0.2050 (790/3854, ALSPAC)
T=0.1961 (727/3708, TWINSUK)
T=0.0014 (4/2922, KOREAN)
T=0.0979 (204/2084, HGDP_Stanford)
T=0.0777 (156/2008, HapMap)
T=0.0022 (4/1832, Korea1K)
T=0.204 (204/998, GoNL)
T=0.013 (10/790, PRJEB37584)
T=0.104 (65/626, Chileans)
T=0.205 (123/600, NorthernSweden)
T=0.190 (41/216, Qatari)
T=0.014 (3/216, Vietnamese)
C=0.49 (40/82, SGDP_PRJ)
T=0.22 (12/54, Ancient Sardinia)
T=0.20 (8/40, GENOME_DK)
C=0.42 (5/12, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: KAT2B : Intron Variant
Publications: 1 citation
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	192622	C=0.803330	T=0.196670
European	Sub	166708	C=0.790172	T=0.209828
African	Sub	7418	C=0.9527	T=0.0473
African Others	Sub	268	C=0.970	T=0.030
African American	Sub	7150	C=0.9520	T=0.0480
Asian	Sub	462	C=0.983	T=0.017
East Asian	Sub	316	C=0.987	T=0.013
Other Asian	Sub	146	C=0.973	T=0.027
Latin American 1	Sub	898	C=0.837	T=0.163
Latin American 2	Sub	4830	C=0.8836	T=0.1164
South Asian	Sub	5028	C=0.8795	T=0.1205
Other	Sub	7278	C=0.8310	T=0.1690

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.862790	T=0.137210
Allele Frequency Aggregator	Total	Global	192622	C=0.803330	T=0.196670
Allele Frequency Aggregator	European	Sub	166708	C=0.790172	T=0.209828
Allele Frequency Aggregator	African	Sub	7418	C=0.9527	T=0.0473
Allele Frequency Aggregator	Other	Sub	7278	C=0.8310	T=0.1690
Allele Frequency Aggregator	South Asian	Sub	5028	C=0.8795	T=0.1205
Allele Frequency Aggregator	Latin American 2	Sub	4830	C=0.8836	T=0.1164
Allele Frequency Aggregator	Latin American 1	Sub	898	C=0.837	T=0.163
Allele Frequency Aggregator	Asian	Sub	462	C=0.983	T=0.017
gnomAD - Genomes	Global	Study-wide	140052	C=0.850841	T=0.149159
gnomAD - Genomes	European	Sub	75832	C=0.79021	T=0.20979
gnomAD - Genomes	African	Sub	41994	C=0.94961	T=0.05039
gnomAD - Genomes	American	Sub	13622	C=0.86595	T=0.13405
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	C=0.7875	T=0.2125
gnomAD - Genomes	East Asian	Sub	3134	C=0.9914	T=0.0086
gnomAD - Genomes	Other	Sub	2148	C=0.8575	T=0.1425
14KJPN	JAPANESE	Study-wide	28258	C=0.98963	T=0.01037
8.3KJPN	JAPANESE	Study-wide	16760	C=0.98938	T=0.01062
1000Genomes_30x	Global	Study-wide	6404	C=0.9182	T=0.0818
1000Genomes_30x	African	Sub	1786	C=0.9776	T=0.0224
1000Genomes_30x	Europe	Sub	1266	C=0.7915	T=0.2085
1000Genomes_30x	South Asian	Sub	1202	C=0.9085	T=0.0915
1000Genomes_30x	East Asian	Sub	1170	C=0.9957	T=0.0043
1000Genomes_30x	American	Sub	980	C=0.893	T=0.107
1000Genomes	Global	Study-wide	5008	C=0.9169	T=0.0831
1000Genomes	African	Sub	1322	C=0.9766	T=0.0234
1000Genomes	East Asian	Sub	1008	C=0.9950	T=0.0050
1000Genomes	Europe	Sub	1006	C=0.7913	T=0.2087
1000Genomes	South Asian	Sub	978	C=0.904	T=0.096
1000Genomes	American	Sub	694	C=0.890	T=0.110
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.7982	T=0.2018
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.7950	T=0.2050
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.8039	T=0.1961
KOREAN population from KRGDB	KOREAN	Study-wide	2922	C=0.9986	T=0.0014
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	C=0.9021	T=0.0979
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	C=0.977	T=0.023
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	C=0.865	T=0.135
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	C=0.774	T=0.226
HGDP-CEPH-db Supplement 1	Europe	Sub	320	C=0.841	T=0.159
HGDP-CEPH-db Supplement 1	Africa	Sub	242	C=0.983	T=0.017
HGDP-CEPH-db Supplement 1	America	Sub	216	C=0.986	T=0.014
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	C=1.00	T=0.00
HapMap	Global	Study-wide	2008	C=0.9223	T=0.0777
HapMap	American	Sub	832	C=0.909	T=0.091
HapMap	African	Sub	746	C=0.958	T=0.042
HapMap	Asian	Sub	254	C=0.992	T=0.008
HapMap	Europe	Sub	176	C=0.733	T=0.267
Korean Genome Project	KOREAN	Study-wide	1832	C=0.9978	T=0.0022
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.796	T=0.204
CNV burdens in cranial meningiomas	Global	Study-wide	790	C=0.987	T=0.013
CNV burdens in cranial meningiomas	CRM	Sub	790	C=0.987	T=0.013
Chileans	Chilean	Study-wide	626	C=0.896	T=0.104
Northern Sweden	ACPOP	Study-wide	600	C=0.795	T=0.205
Qatari	Global	Study-wide	216	C=0.810	T=0.190
A Vietnamese Genetic Variation Database	Global	Study-wide	216	C=0.986	T=0.014
SGDP_PRJ	Global	Study-wide	82	C=0.49	T=0.51
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	54	C=0.78	T=0.22
The Danish reference pan genome	Danish	Study-wide	40	C=0.80	T=0.20
Siberian	Global	Study-wide	12	C=0.42	T=0.58

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.20067054C>T
GRCh37.p13 chr 3	NC_000003.11:g.20108546C>T

Gene: KAT2B, lysine acetyltransferase 2B (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
KAT2B transcript	NM_003884.5:c.304-5279C>T	N/A	Intron Variant
KAT2B transcript variant X1	XM_005265528.5:c.304-5279… XM_005265528.5:c.304-5279C>T	N/A	Intron Variant
KAT2B transcript variant X2	XM_047449147.1:c.-192-431… XM_047449147.1:c.-192-4310C>T	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	T
GRCh38.p14 chr 3	NC_000003.12:g.20067054=	NC_000003.12:g.20067054C>T
GRCh37.p13 chr 3	NC_000003.11:g.20108546=	NC_000003.11:g.20108546C>T
KAT2B transcript	NM_003884.4:c.304-5279=	NM_003884.4:c.304-5279C>T
KAT2B transcript	NM_003884.5:c.304-5279=	NM_003884.5:c.304-5279C>T
KAT2B transcript variant X1	XM_005265528.1:c.304-5279=	XM_005265528.1:c.304-5279C>T
KAT2B transcript variant X1	XM_005265528.5:c.304-5279=	XM_005265528.5:c.304-5279C>T
KAT2B transcript variant X2	XM_047449147.1:c.-192-4310=	XM_047449147.1:c.-192-4310C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

100 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss1465832	Oct 13, 2000 (86)
2	ABI	ss41961221	Mar 15, 2006 (126)
3	ILLUMINA	ss66928839	Dec 01, 2006 (127)
4	ILLUMINA	ss67084702	Dec 01, 2006 (127)
5	ILLUMINA	ss68105060	Dec 12, 2006 (127)
6	ILLUMINA	ss70526812	May 25, 2008 (130)
7	ILLUMINA	ss71056875	May 17, 2007 (127)
8	ILLUMINA	ss75781990	Dec 06, 2007 (129)
9	AFFY	ss76437345	Dec 06, 2007 (129)
10	KRIBB_YJKIM	ss83685727	Dec 15, 2007 (130)
11	BCMHGSC_JDW	ss92017060	Mar 24, 2008 (129)
12	1000GENOMES	ss111352661	Jan 25, 2009 (130)
13	ENSEMBL	ss138752139	Dec 01, 2009 (131)
14	ILLUMINA	ss152975499	Dec 01, 2009 (131)
15	ILLUMINA	ss159172820	Dec 01, 2009 (131)
16	ILLUMINA	ss159974215	Dec 01, 2009 (131)
17	ILLUMINA	ss171211985	Jul 04, 2010 (132)
18	1000GENOMES	ss220014471	Jul 14, 2010 (132)
19	1000GENOMES	ss231732089	Jul 14, 2010 (132)
20	ILLUMINA	ss479509632	May 04, 2012 (137)
21	ILLUMINA	ss479513576	May 04, 2012 (137)
22	ILLUMINA	ss479962623	Sep 08, 2015 (146)
23	ILLUMINA	ss484554069	May 04, 2012 (137)
24	ILLUMINA	ss536691018	Sep 08, 2015 (146)
25	SSMP	ss650134952	Apr 25, 2013 (138)
26	ILLUMINA	ss778382030	Sep 08, 2015 (146)
27	ILLUMINA	ss782723694	Sep 08, 2015 (146)
28	ILLUMINA	ss783691184	Sep 08, 2015 (146)
29	ILLUMINA	ss831975328	Sep 08, 2015 (146)
30	ILLUMINA	ss832685354	Jul 13, 2019 (153)
31	ILLUMINA	ss833837014	Sep 08, 2015 (146)
32	EVA-GONL	ss978339869	Aug 21, 2014 (142)
33	JMKIDD_LAB	ss1070223104	Aug 21, 2014 (142)
34	1000GENOMES	ss1303056114	Aug 21, 2014 (142)
35	EVA_GENOME_DK	ss1579869351	Apr 01, 2015 (144)
36	EVA_DECODE	ss1587802336	Apr 01, 2015 (144)
37	EVA_UK10K_ALSPAC	ss1606552833	Apr 01, 2015 (144)
38	EVA_UK10K_TWINSUK	ss1649546866	Apr 01, 2015 (144)
39	EVA_SVP	ss1712558415	Apr 01, 2015 (144)
40	ILLUMINA	ss1752461430	Sep 08, 2015 (146)
41	WEILL_CORNELL_DGM	ss1921589440	Feb 12, 2016 (147)
42	GENOMED	ss1969337887	Jul 19, 2016 (147)
43	JJLAB	ss2021349658	Sep 14, 2016 (149)
44	USC_VALOUEV	ss2149416562	Dec 20, 2016 (150)
45	HUMAN_LONGEVITY	ss2249588943	Dec 20, 2016 (150)
46	ILLUMINA	ss2633919831	Nov 08, 2017 (151)
47	GNOMAD	ss2790249026	Nov 08, 2017 (151)
48	AFFY	ss2985871809	Nov 08, 2017 (151)
49	SWEGEN	ss2991930896	Nov 08, 2017 (151)
50	BIOINF_KMB_FNS_UNIBA	ss3024437070	Nov 08, 2017 (151)
51	CSHL	ss3344913117	Nov 08, 2017 (151)
52	ILLUMINA	ss3628605165	Oct 12, 2018 (152)
53	ILLUMINA	ss3631867850	Oct 12, 2018 (152)
54	ILLUMINA	ss3633284323	Oct 12, 2018 (152)
55	ILLUMINA	ss3634000931	Oct 12, 2018 (152)
56	ILLUMINA	ss3634883475	Oct 12, 2018 (152)
57	ILLUMINA	ss3635685076	Oct 12, 2018 (152)
58	ILLUMINA	ss3636579625	Oct 12, 2018 (152)
59	ILLUMINA	ss3637437390	Oct 12, 2018 (152)
60	ILLUMINA	ss3638400873	Oct 12, 2018 (152)
61	ILLUMINA	ss3639204101	Oct 12, 2018 (152)
62	ILLUMINA	ss3639903158	Oct 12, 2018 (152)
63	ILLUMINA	ss3640590778	Oct 12, 2018 (152)
64	ILLUMINA	ss3641142540	Oct 12, 2018 (152)
65	ILLUMINA	ss3641439061	Oct 12, 2018 (152)
66	ILLUMINA	ss3643358906	Oct 12, 2018 (152)
67	ILLUMINA	ss3643950221	Oct 12, 2018 (152)
68	EGCUT_WGS	ss3659833720	Jul 13, 2019 (153)
69	EVA_DECODE	ss3708762279	Jul 13, 2019 (153)
70	ACPOP	ss3729685483	Jul 13, 2019 (153)
71	ILLUMINA	ss3745183268	Jul 13, 2019 (153)
72	EVA	ss3759740417	Jul 13, 2019 (153)
73	ILLUMINA	ss3772679035	Jul 13, 2019 (153)
74	KHV_HUMAN_GENOMES	ss3802886884	Jul 13, 2019 (153)
75	EVA	ss3827691592	Apr 25, 2020 (154)
76	EVA	ss3837268181	Apr 25, 2020 (154)
77	EVA	ss3842692408	Apr 25, 2020 (154)
78	HGDP	ss3847699974	Apr 25, 2020 (154)
79	SGDP_PRJ	ss3855359438	Apr 25, 2020 (154)
80	KRGDB	ss3901144026	Apr 25, 2020 (154)
81	KOGIC	ss3950791184	Apr 25, 2020 (154)
82	EVA	ss3984504014	Apr 26, 2021 (155)
83	EVA	ss3984976940	Apr 26, 2021 (155)
84	EVA	ss4017068276	Apr 26, 2021 (155)
85	TOPMED	ss4556388583	Apr 26, 2021 (155)
86	TOMMO_GENOMICS	ss5158083208	Apr 26, 2021 (155)
87	1000G_HIGH_COVERAGE	ss5253267462	Oct 13, 2022 (156)
88	EVA	ss5314838670	Oct 13, 2022 (156)
89	EVA	ss5338296974	Oct 13, 2022 (156)
90	HUGCELL_USP	ss5452742943	Oct 13, 2022 (156)
91	EVA	ss5506906419	Oct 13, 2022 (156)
92	1000G_HIGH_COVERAGE	ss5531210506	Oct 13, 2022 (156)
93	SANFORD_IMAGENETICS	ss5624511976	Oct 13, 2022 (156)
94	SANFORD_IMAGENETICS	ss5631666568	Oct 13, 2022 (156)
95	TOMMO_GENOMICS	ss5689432413	Oct 13, 2022 (156)
96	EVA	ss5799571678	Oct 13, 2022 (156)
97	YY_MCH	ss5803535680	Oct 13, 2022 (156)
98	EVA	ss5825430312	Oct 13, 2022 (156)
99	EVA	ss5867884918	Oct 13, 2022 (156)
100	EVA	ss5959933284	Oct 13, 2022 (156)
101	1000Genomes	NC_000003.11 - 20108546	Oct 12, 2018 (152)
102	1000Genomes_30x	NC_000003.12 - 20067054	Oct 13, 2022 (156)
103	The Avon Longitudinal Study of Parents and Children	NC_000003.11 - 20108546	Oct 12, 2018 (152)
104	Chileans	NC_000003.11 - 20108546	Apr 25, 2020 (154)
105	Genetic variation in the Estonian population	NC_000003.11 - 20108546	Oct 12, 2018 (152)
106	The Danish reference pan genome	NC_000003.11 - 20108546	Apr 25, 2020 (154)
107	gnomAD - Genomes	NC_000003.12 - 20067054	Apr 26, 2021 (155)
108	Genome of the Netherlands Release 5	NC_000003.11 - 20108546	Apr 25, 2020 (154)
109	HGDP-CEPH-db Supplement 1	NC_000003.10 - 20083550	Apr 25, 2020 (154)
110	HapMap	NC_000003.12 - 20067054	Apr 25, 2020 (154)
111	KOREAN population from KRGDB	NC_000003.11 - 20108546	Apr 25, 2020 (154)
112	Korean Genome Project	NC_000003.12 - 20067054	Apr 25, 2020 (154)
113	Northern Sweden	NC_000003.11 - 20108546	Jul 13, 2019 (153)
114	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000003.11 - 20108546	Apr 26, 2021 (155)
115	CNV burdens in cranial meningiomas	NC_000003.11 - 20108546	Apr 26, 2021 (155)
116	Qatari	NC_000003.11 - 20108546	Apr 25, 2020 (154)
117	SGDP_PRJ	NC_000003.11 - 20108546	Apr 25, 2020 (154)
118	Siberian	NC_000003.11 - 20108546	Apr 25, 2020 (154)
119	8.3KJPN	NC_000003.11 - 20108546	Apr 26, 2021 (155)
120	14KJPN	NC_000003.12 - 20067054	Oct 13, 2022 (156)
121	TopMed	NC_000003.12 - 20067054	Apr 26, 2021 (155)
122	UK 10K study - Twins	NC_000003.11 - 20108546	Oct 12, 2018 (152)
123	A Vietnamese Genetic Variation Database	NC_000003.11 - 20108546	Jul 13, 2019 (153)
124	ALFA	NC_000003.12 - 20067054	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs59534684	May 25, 2008 (130)
rs386517755	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3639204101, ss3639903158, ss3643950221	NC_000003.9:20083549:C:T	NC_000003.12:20067053:C:T	(self)
377866, ss92017060, ss111352661, ss479509632, ss1587802336, ss1712558415, ss3643358906, ss3847699974	NC_000003.10:20083549:C:T	NC_000003.12:20067053:C:T	(self)
14210227, 7882976, 278687, 5571968, 6034290, 3460892, 8321420, 2970348, 202867, 53358, 3631370, 7376418, 1932916, 16052515, 7882976, 1714934, ss220014471, ss231732089, ss479513576, ss479962623, ss484554069, ss536691018, ss650134952, ss778382030, ss782723694, ss783691184, ss831975328, ss832685354, ss833837014, ss978339869, ss1070223104, ss1303056114, ss1579869351, ss1606552833, ss1649546866, ss1752461430, ss1921589440, ss1969337887, ss2021349658, ss2149416562, ss2633919831, ss2790249026, ss2985871809, ss2991930896, ss3344913117, ss3628605165, ss3631867850, ss3633284323, ss3634000931, ss3634883475, ss3635685076, ss3636579625, ss3637437390, ss3638400873, ss3640590778, ss3641142540, ss3641439061, ss3659833720, ss3729685483, ss3745183268, ss3759740417, ss3772679035, ss3827691592, ss3837268181, ss3855359438, ss3901144026, ss3984504014, ss3984976940, ss4017068276, ss5158083208, ss5314838670, ss5338296974, ss5506906419, ss5624511976, ss5631666568, ss5799571678, ss5825430312, ss5959933284	NC_000003.11:20108545:C:T	NC_000003.12:20067053:C:T	(self)
18736441, 100853471, 2314655, 7169185, 23269517, 393766138, 6088404783, ss2249588943, ss3024437070, ss3708762279, ss3802886884, ss3842692408, ss3950791184, ss4556388583, ss5253267462, ss5452742943, ss5531210506, ss5689432413, ss5803535680, ss5867884918	NC_000003.12:20067053:C:T	NC_000003.12:20067053:C:T	(self)
ss1465832, ss41961221, ss66928839, ss67084702, ss68105060, ss70526812, ss71056875, ss75781990, ss76437345, ss83685727, ss138752139, ss152975499, ss159172820, ss159974215, ss171211985	NT_022517.18:20048545:C:T	NC_000003.12:20067053:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs1124376

PMID	Title	Author	Year	Journal
25358694	Genetic adaptation of the human circadian clock to day-length latitudinal variations and relevance for affective disorders.	Forni D et al.	2014	Genome biology

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1124376