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dbSNP Short Genetic Variations

Examples: rs268, BRCA1 and more Advanced search

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11229030

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr11:57435536 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.390742 (128175/328030, ALFA)
C=0.443345 (117349/264690, TOPMED)
C=0.454212 (63597/140016, GnomAD) (+ 21 more)
C=0.44865 (35304/78690, PAGE_STUDY)
C=0.17942 (5070/28258, 14KJPN)
C=0.17878 (2996/16758, 8.3KJPN)
C=0.3958 (2535/6404, 1000G_30x)
C=0.3876 (1941/5008, 1000G)
C=0.4109 (1841/4480, Estonian)
C=0.4006 (1544/3854, ALSPAC)
C=0.3892 (1443/3708, TWINSUK)
C=0.1911 (560/2930, KOREAN)
C=0.3612 (752/2082, HGDP_Stanford)
C=0.4019 (758/1886, HapMap)
C=0.1834 (336/1832, Korea1K)
C=0.396 (395/998, GoNL)
C=0.133 (105/792, PRJEB37584)
C=0.373 (224/600, NorthernSweden)
C=0.230 (107/466, SGDP_PRJ)
C=0.412 (89/216, Qatari)
C=0.130 (27/208, Vietnamese)
C=0.37 (28/76, Ancient Sardinia)
C=0.17 (9/52, Siberian)
C=0.42 (17/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
None
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 333066 C=0.391571 T=0.608429
European Sub 290798 C=0.388607 T=0.611393
African Sub 11726 C=0.64566 T=0.35434
African Others Sub 456 C=0.693 T=0.307
African American Sub 11270 C=0.64374 T=0.35626
Asian Sub 3924 C=0.1985 T=0.8015
East Asian Sub 3194 C=0.1785 T=0.8215
Other Asian Sub 730 C=0.286 T=0.714
Latin American 1 Sub 1134 C=0.4004 T=0.5996
Latin American 2 Sub 7218 C=0.2696 T=0.7304
South Asian Sub 5214 C=0.3299 T=0.6701
Other Sub 13052 C=0.37872 T=0.62128


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 328030 C=0.390742 T=0.609258
Allele Frequency Aggregator European Sub 287704 C=0.388538 T=0.611462
Allele Frequency Aggregator Other Sub 12252 C=0.37969 T=0.62031
Allele Frequency Aggregator African Sub 10584 C=0.64626 T=0.35374
Allele Frequency Aggregator Latin American 2 Sub 7218 C=0.2696 T=0.7304
Allele Frequency Aggregator South Asian Sub 5214 C=0.3299 T=0.6701
Allele Frequency Aggregator Asian Sub 3924 C=0.1985 T=0.8015
Allele Frequency Aggregator Latin American 1 Sub 1134 C=0.4004 T=0.5996
TopMed Global Study-wide 264690 C=0.443345 T=0.556655
gnomAD - Genomes Global Study-wide 140016 C=0.454212 T=0.545788
gnomAD - Genomes European Sub 75844 C=0.39511 T=0.60489
gnomAD - Genomes African Sub 41938 C=0.64200 T=0.35800
gnomAD - Genomes American Sub 13634 C=0.31553 T=0.68447
gnomAD - Genomes Ashkenazi Jewish Sub 3322 C=0.3052 T=0.6948
gnomAD - Genomes East Asian Sub 3126 C=0.1670 T=0.8330
gnomAD - Genomes Other Sub 2152 C=0.4033 T=0.5967
The PAGE Study Global Study-wide 78690 C=0.44865 T=0.55135
The PAGE Study AfricanAmerican Sub 32506 C=0.63785 T=0.36215
The PAGE Study Mexican Sub 10808 C=0.28479 T=0.71521
The PAGE Study Asian Sub 8318 C=0.1643 T=0.8357
The PAGE Study PuertoRican Sub 7918 C=0.4028 T=0.5972
The PAGE Study NativeHawaiian Sub 4534 C=0.3293 T=0.6707
The PAGE Study Cuban Sub 4230 C=0.3950 T=0.6050
The PAGE Study Dominican Sub 3828 C=0.4778 T=0.5222
The PAGE Study CentralAmerican Sub 2450 C=0.2951 T=0.7049
The PAGE Study SouthAmerican Sub 1982 C=0.2437 T=0.7563
The PAGE Study NativeAmerican Sub 1260 C=0.3968 T=0.6032
The PAGE Study SouthAsian Sub 856 C=0.277 T=0.723
14KJPN JAPANESE Study-wide 28258 C=0.17942 T=0.82058
8.3KJPN JAPANESE Study-wide 16758 C=0.17878 T=0.82122
1000Genomes_30x Global Study-wide 6404 C=0.3958 T=0.6042
1000Genomes_30x African Sub 1786 C=0.6713 T=0.3287
1000Genomes_30x Europe Sub 1266 C=0.3863 T=0.6137
1000Genomes_30x South Asian Sub 1202 C=0.3120 T=0.6880
1000Genomes_30x East Asian Sub 1170 C=0.1675 T=0.8325
1000Genomes_30x American Sub 980 C=0.282 T=0.718
1000Genomes Global Study-wide 5008 C=0.3876 T=0.6124
1000Genomes African Sub 1322 C=0.6732 T=0.3268
1000Genomes East Asian Sub 1008 C=0.1587 T=0.8413
1000Genomes Europe Sub 1006 C=0.3807 T=0.6193
1000Genomes South Asian Sub 978 C=0.322 T=0.678
1000Genomes American Sub 694 C=0.278 T=0.722
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.4109 T=0.5891
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.4006 T=0.5994
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.3892 T=0.6108
KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.1911 T=0.8089
HGDP-CEPH-db Supplement 1 Global Study-wide 2082 C=0.3612 T=0.6388
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 C=0.155 T=0.845
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 412 C=0.413 T=0.587
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 C=0.429 T=0.571
HGDP-CEPH-db Supplement 1 Europe Sub 320 C=0.409 T=0.591
HGDP-CEPH-db Supplement 1 Africa Sub 242 C=0.760 T=0.240
HGDP-CEPH-db Supplement 1 America Sub 216 C=0.116 T=0.884
HGDP-CEPH-db Supplement 1 Oceania Sub 72 C=0.26 T=0.74
HapMap Global Study-wide 1886 C=0.4019 T=0.5981
HapMap American Sub 764 C=0.309 T=0.691
HapMap African Sub 692 C=0.590 T=0.410
HapMap Asian Sub 254 C=0.169 T=0.831
HapMap Europe Sub 176 C=0.403 T=0.597
Korean Genome Project KOREAN Study-wide 1832 C=0.1834 T=0.8166
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.396 T=0.604
CNV burdens in cranial meningiomas Global Study-wide 792 C=0.133 T=0.867
CNV burdens in cranial meningiomas CRM Sub 792 C=0.133 T=0.867
Northern Sweden ACPOP Study-wide 600 C=0.373 T=0.627
SGDP_PRJ Global Study-wide 466 C=0.230 T=0.770
Qatari Global Study-wide 216 C=0.412 T=0.588
A Vietnamese Genetic Variation Database Global Study-wide 208 C=0.130 T=0.870
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 76 C=0.37 T=0.63
Siberian Global Study-wide 52 C=0.17 T=0.83
The Danish reference pan genome Danish Study-wide 40 C=0.42 T=0.57
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 11 NC_000011.10:g.57435536C>T
GRCh37.p13 chr 11 NC_000011.9:g.57203009C>T
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= T
GRCh38.p14 chr 11 NC_000011.10:g.57435536= NC_000011.10:g.57435536C>T
GRCh37.p13 chr 11 NC_000011.9:g.57203009= NC_000011.9:g.57203009C>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

139 SubSNP, 24 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_SNP ss16271492 Feb 27, 2004 (120)
2 SC_SNP ss18454166 Feb 27, 2004 (120)
3 ILLUMINA ss66795446 Dec 01, 2006 (127)
4 ILLUMINA ss66928031 Dec 01, 2006 (127)
5 ILLUMINA ss67082848 Dec 01, 2006 (127)
6 ILLUMINA ss70392518 May 17, 2007 (127)
7 ILLUMINA ss70525983 May 26, 2008 (130)
8 ILLUMINA ss71055928 May 17, 2007 (127)
9 ILLUMINA ss75809439 Dec 07, 2007 (129)
10 HGSV ss83330317 Dec 16, 2007 (130)
11 KRIBB_YJKIM ss85091608 Dec 16, 2007 (130)
12 HUMANGENOME_JCVI ss97481234 Feb 06, 2009 (130)
13 BGI ss106745147 Feb 06, 2009 (130)
14 1000GENOMES ss110516818 Jan 24, 2009 (130)
15 ILLUMINA-UK ss119850659 Dec 01, 2009 (131)
16 ILLUMINA ss121463327 Dec 01, 2009 (131)
17 ENSEMBL ss143836111 Dec 01, 2009 (131)
18 ILLUMINA ss152971051 Dec 01, 2009 (131)
19 GMI ss156350406 Dec 01, 2009 (131)
20 ILLUMINA ss159171947 Dec 01, 2009 (131)
21 ILLUMINA ss159972599 Dec 01, 2009 (131)
22 COMPLETE_GENOMICS ss168420814 Jul 04, 2010 (132)
23 ILLUMINA ss169834936 Jul 04, 2010 (132)
24 ILLUMINA ss171193065 Jul 04, 2010 (132)
25 BUSHMAN ss202751435 Jul 04, 2010 (132)
26 BCM-HGSC-SUB ss207710549 Jul 04, 2010 (132)
27 1000GENOMES ss211137397 Jul 14, 2010 (132)
28 1000GENOMES ss225260004 Jul 14, 2010 (132)
29 1000GENOMES ss235574204 Jul 15, 2010 (132)
30 1000GENOMES ss242202538 Jul 15, 2010 (132)
31 GMI ss281023605 May 04, 2012 (137)
32 GMI ss286388604 Apr 25, 2013 (138)
33 PJP ss291052215 May 09, 2011 (134)
34 ILLUMINA ss479504935 May 04, 2012 (137)
35 ILLUMINA ss479508910 May 04, 2012 (137)
36 ILLUMINA ss479956146 Sep 08, 2015 (146)
37 ILLUMINA ss484551759 May 04, 2012 (137)
38 ILLUMINA ss536689322 Sep 08, 2015 (146)
39 TISHKOFF ss562580272 Apr 25, 2013 (138)
40 SSMP ss658087874 Apr 25, 2013 (138)
41 ILLUMINA ss778381554 Sep 08, 2015 (146)
42 ILLUMINA ss782722538 Sep 08, 2015 (146)
43 ILLUMINA ss783690062 Sep 08, 2015 (146)
44 ILLUMINA ss825361913 Apr 01, 2015 (144)
45 ILLUMINA ss831974144 Sep 08, 2015 (146)
46 ILLUMINA ss832684484 Jul 13, 2019 (153)
47 ILLUMINA ss833836535 Sep 08, 2015 (146)
48 EVA-GONL ss988556550 Aug 21, 2014 (142)
49 JMKIDD_LAB ss1077755833 Aug 21, 2014 (142)
50 1000GENOMES ss1341403549 Aug 21, 2014 (142)
51 DDI ss1426644123 Apr 01, 2015 (144)
52 EVA_GENOME_DK ss1575734319 Apr 01, 2015 (144)
53 EVA_DECODE ss1598219254 Apr 01, 2015 (144)
54 EVA_UK10K_ALSPAC ss1626658119 Apr 01, 2015 (144)
55 EVA_UK10K_TWINSUK ss1669652152 Apr 01, 2015 (144)
56 EVA_SVP ss1713256682 Apr 01, 2015 (144)
57 ILLUMINA ss1752022356 Sep 08, 2015 (146)
58 HAMMER_LAB ss1806831382 Sep 08, 2015 (146)
59 WEILL_CORNELL_DGM ss1931916811 Feb 12, 2016 (147)
60 ILLUMINA ss1946310487 Feb 12, 2016 (147)
61 ILLUMINA ss1959350640 Feb 12, 2016 (147)
62 GENOMED ss1967370036 Jul 19, 2016 (147)
63 JJLAB ss2026705267 Sep 14, 2016 (149)
64 ILLUMINA ss2094790717 Dec 20, 2016 (150)
65 ILLUMINA ss2095022192 Dec 20, 2016 (150)
66 USC_VALOUEV ss2155006726 Dec 20, 2016 (150)
67 HUMAN_LONGEVITY ss2182600678 Dec 20, 2016 (150)
68 SYSTEMSBIOZJU ss2627825031 Nov 08, 2017 (151)
69 ILLUMINA ss2632837508 Nov 08, 2017 (151)
70 ILLUMINA ss2632837509 Nov 08, 2017 (151)
71 ILLUMINA ss2635025886 Nov 08, 2017 (151)
72 GRF ss2699294379 Nov 08, 2017 (151)
73 ILLUMINA ss2710735509 Nov 08, 2017 (151)
74 GNOMAD ss2900017060 Nov 08, 2017 (151)
75 AFFY ss2985587306 Nov 08, 2017 (151)
76 SWEGEN ss3008148348 Nov 08, 2017 (151)
77 ILLUMINA ss3021337378 Nov 08, 2017 (151)
78 BIOINF_KMB_FNS_UNIBA ss3027151423 Nov 08, 2017 (151)
79 CSHL ss3349616976 Nov 08, 2017 (151)
80 ILLUMINA ss3625601486 Oct 12, 2018 (152)
81 ILLUMINA ss3626663863 Oct 12, 2018 (152)
82 ILLUMINA ss3630854692 Oct 12, 2018 (152)
83 ILLUMINA ss3632986478 Oct 12, 2018 (152)
84 ILLUMINA ss3633685667 Oct 12, 2018 (152)
85 ILLUMINA ss3634455252 Oct 12, 2018 (152)
86 ILLUMINA ss3635377282 Oct 12, 2018 (152)
87 ILLUMINA ss3636140090 Oct 12, 2018 (152)
88 ILLUMINA ss3637128120 Oct 12, 2018 (152)
89 ILLUMINA ss3637907977 Oct 12, 2018 (152)
90 ILLUMINA ss3638969009 Oct 12, 2018 (152)
91 ILLUMINA ss3639485253 Oct 12, 2018 (152)
92 ILLUMINA ss3640162590 Oct 12, 2018 (152)
93 ILLUMINA ss3641015943 Oct 12, 2018 (152)
94 ILLUMINA ss3641310391 Oct 12, 2018 (152)
95 ILLUMINA ss3642906357 Oct 12, 2018 (152)
96 ILLUMINA ss3644563298 Oct 12, 2018 (152)
97 URBANLAB ss3649618685 Oct 12, 2018 (152)
98 ILLUMINA ss3651701336 Oct 12, 2018 (152)
99 EGCUT_WGS ss3675487639 Jul 13, 2019 (153)
100 EVA_DECODE ss3691849926 Jul 13, 2019 (153)
101 ILLUMINA ss3725242179 Jul 13, 2019 (153)
102 ACPOP ss3738208818 Jul 13, 2019 (153)
103 ILLUMINA ss3744085126 Jul 13, 2019 (153)
104 ILLUMINA ss3744380546 Jul 13, 2019 (153)
105 ILLUMINA ss3744756109 Jul 13, 2019 (153)
106 EVA ss3749336417 Jul 13, 2019 (153)
107 PAGE_CC ss3771625315 Jul 13, 2019 (153)
108 ILLUMINA ss3772256105 Jul 13, 2019 (153)
109 KHV_HUMAN_GENOMES ss3814682684 Jul 13, 2019 (153)
110 EVA ss3832645892 Apr 26, 2020 (154)
111 EVA ss3839880768 Apr 26, 2020 (154)
112 EVA ss3845359938 Apr 26, 2020 (154)
113 HGDP ss3847419423 Apr 26, 2020 (154)
114 SGDP_PRJ ss3876326192 Apr 26, 2020 (154)
115 KRGDB ss3924678224 Apr 26, 2020 (154)
116 KOGIC ss3969954552 Apr 26, 2020 (154)
117 EVA ss3984650935 Apr 26, 2021 (155)
118 EVA ss3985535632 Apr 26, 2021 (155)
119 EVA ss4017538913 Apr 26, 2021 (155)
120 TOPMED ss4886356861 Apr 26, 2021 (155)
121 TOMMO_GENOMICS ss5202120395 Apr 26, 2021 (155)
122 1000G_HIGH_COVERAGE ss5287530516 Oct 16, 2022 (156)
123 EVA ss5315548062 Oct 16, 2022 (156)
124 EVA ss5399774859 Oct 16, 2022 (156)
125 HUGCELL_USP ss5482699468 Oct 16, 2022 (156)
126 EVA ss5510377997 Oct 16, 2022 (156)
127 1000G_HIGH_COVERAGE ss5583312847 Oct 16, 2022 (156)
128 SANFORD_IMAGENETICS ss5624275355 Oct 16, 2022 (156)
129 SANFORD_IMAGENETICS ss5651289868 Oct 16, 2022 (156)
130 TOMMO_GENOMICS ss5750038491 Oct 16, 2022 (156)
131 EVA ss5799843499 Oct 16, 2022 (156)
132 YY_MCH ss5812442977 Oct 16, 2022 (156)
133 EVA ss5836705265 Oct 16, 2022 (156)
134 EVA ss5847391386 Oct 16, 2022 (156)
135 EVA ss5849992250 Oct 16, 2022 (156)
136 EVA ss5920103914 Oct 16, 2022 (156)
137 EVA ss5942602060 Oct 16, 2022 (156)
138 EVA ss5979359260 Oct 16, 2022 (156)
139 EVA ss5980678636 Oct 16, 2022 (156)
140 1000Genomes NC_000011.9 - 57203009 Oct 12, 2018 (152)
141 1000Genomes_30x NC_000011.10 - 57435536 Oct 16, 2022 (156)
142 The Avon Longitudinal Study of Parents and Children NC_000011.9 - 57203009 Oct 12, 2018 (152)
143 Genetic variation in the Estonian population NC_000011.9 - 57203009 Oct 12, 2018 (152)
144 The Danish reference pan genome NC_000011.9 - 57203009 Apr 26, 2020 (154)
145 gnomAD - Genomes NC_000011.10 - 57435536 Apr 26, 2021 (155)
146 Genome of the Netherlands Release 5 NC_000011.9 - 57203009 Apr 26, 2020 (154)
147 HGDP-CEPH-db Supplement 1 NC_000011.8 - 56959585 Apr 26, 2020 (154)
148 HapMap NC_000011.10 - 57435536 Apr 26, 2020 (154)
149 KOREAN population from KRGDB NC_000011.9 - 57203009 Apr 26, 2020 (154)
150 Korean Genome Project NC_000011.10 - 57435536 Apr 26, 2020 (154)
151 Northern Sweden NC_000011.9 - 57203009 Jul 13, 2019 (153)
152 The PAGE Study NC_000011.10 - 57435536 Jul 13, 2019 (153)
153 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000011.9 - 57203009 Apr 26, 2021 (155)
154 CNV burdens in cranial meningiomas NC_000011.9 - 57203009 Apr 26, 2021 (155)
155 Qatari NC_000011.9 - 57203009 Apr 26, 2020 (154)
156 SGDP_PRJ NC_000011.9 - 57203009 Apr 26, 2020 (154)
157 Siberian NC_000011.9 - 57203009 Apr 26, 2020 (154)
158 8.3KJPN NC_000011.9 - 57203009 Apr 26, 2021 (155)
159 14KJPN NC_000011.10 - 57435536 Oct 16, 2022 (156)
160 TopMed NC_000011.10 - 57435536 Apr 26, 2021 (155)
161 UK 10K study - Twins NC_000011.9 - 57203009 Oct 12, 2018 (152)
162 A Vietnamese Genetic Variation Database NC_000011.9 - 57203009 Jul 13, 2019 (153)
163 ALFA NC_000011.10 - 57435536 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs61378398 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
97315, ss83330317, ss110516818, ss119850659, ss168420814, ss202751435, ss207710549, ss211137397, ss281023605, ss286388604, ss291052215, ss479504935, ss825361913, ss1598219254, ss1713256682, ss2635025886, ss3638969009, ss3639485253, ss3642906357, ss3847419423 NC_000011.8:56959584:C:T NC_000011.10:57435535:C:T (self)
53930411, 29948763, 21225887, 2581973, 13366520, 31855618, 11493683, 761559, 200412, 13958741, 28343172, 7523080, 60089702, 29948763, 6648910, ss225260004, ss235574204, ss242202538, ss479508910, ss479956146, ss484551759, ss536689322, ss562580272, ss658087874, ss778381554, ss782722538, ss783690062, ss831974144, ss832684484, ss833836535, ss988556550, ss1077755833, ss1341403549, ss1426644123, ss1575734319, ss1626658119, ss1669652152, ss1752022356, ss1806831382, ss1931916811, ss1946310487, ss1959350640, ss1967370036, ss2026705267, ss2094790717, ss2095022192, ss2155006726, ss2627825031, ss2632837508, ss2632837509, ss2699294379, ss2710735509, ss2900017060, ss2985587306, ss3008148348, ss3021337378, ss3349616976, ss3625601486, ss3626663863, ss3630854692, ss3632986478, ss3633685667, ss3634455252, ss3635377282, ss3636140090, ss3637128120, ss3637907977, ss3640162590, ss3641015943, ss3641310391, ss3644563298, ss3651701336, ss3675487639, ss3738208818, ss3744085126, ss3744380546, ss3744756109, ss3749336417, ss3772256105, ss3832645892, ss3839880768, ss3876326192, ss3924678224, ss3984650935, ss3985535632, ss4017538913, ss5202120395, ss5315548062, ss5399774859, ss5510377997, ss5624275355, ss5651289868, ss5799843499, ss5836705265, ss5847391386, ss5942602060, ss5979359260, ss5980678636 NC_000011.9:57203008:C:T NC_000011.10:57435535:C:T (self)
70838782, 380652590, 617752, 26332553, 846784, 83875595, 101902517, 5616752683, ss2182600678, ss3027151423, ss3649618685, ss3691849926, ss3725242179, ss3771625315, ss3814682684, ss3845359938, ss3969954552, ss4886356861, ss5287530516, ss5482699468, ss5583312847, ss5750038491, ss5812442977, ss5849992250, ss5920103914 NC_000011.10:57435535:C:T NC_000011.10:57435535:C:T (self)
ss16271492, ss18454166 NT_033903.6:2376050:C:T NC_000011.10:57435535:C:T (self)
ss66795446, ss66928031, ss67082848, ss70392518, ss70525983, ss71055928, ss75809439, ss85091608, ss97481234, ss106745147, ss121463327, ss143836111, ss152971051, ss156350406, ss159171947, ss159972599, ss169834936, ss171193065 NT_167190.1:2508803:C:T NC_000011.10:57435535:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs11229030
PMID Title Author Year Journal
22412388 A genome-wide scan of Ashkenazi Jewish Crohn's disease suggests novel susceptibility loci. Kenny EE et al. 2012 PLoS genetics
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top▲ Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post774+babeb33