Name: rs10108684
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10108684

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr8:122960828 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A / G>C
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.128024 (39083/305278, ALFA)
A=0.108353 (28680/264690, TOPMED)
A=0.130737 (26811/205076, GENOGRAPHIC) (+ 22 more)
A=0.110365 (15461/140090, GnomAD)
A=0.10388 (8175/78700, PAGE_STUDY)
A=0.35509 (10034/28258, 14KJPN)
A=0.35084 (5880/16760, 8.3KJPN)
A=0.1702 (1090/6404, 1000G_30x)
A=0.1801 (902/5008, 1000G)
A=0.1645 (737/4480, Estonian)
A=0.1292 (498/3854, ALSPAC)
A=0.1157 (429/3708, TWINSUK)
A=0.4065 (1191/2930, KOREAN)
A=0.2020 (421/2084, HGDP_Stanford)
A=0.4269 (782/1832, Korea1K)
A=0.1747 (310/1774, HapMap)
A=0.143 (143/998, GoNL)
A=0.463 (365/788, PRJEB37584)
A=0.187 (112/600, NorthernSweden)
A=0.167 (36/216, Qatari)
G=0.490 (103/210, Vietnamese)
G=0.399 (75/188, SGDP_PRJ)
A=0.19 (12/64, Ancient Sardinia)
A=0.20 (8/40, GENOME_DK)
G=0.43 (12/28, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ZHX2 : Intron Variant
Publications: 1 citation
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	310314	G=0.872439	A=0.127561
European	Sub	273408	G=0.873168	A=0.126832
African	Sub	9526	G=0.9687	A=0.0313
African Others	Sub	372	G=0.984	A=0.016
African American	Sub	9154	G=0.9681	A=0.0319
Asian	Sub	3924	G=0.5996	A=0.4004
East Asian	Sub	3178	G=0.5714	A=0.4286
Other Asian	Sub	746	G=0.720	A=0.280
Latin American 1	Sub	1134	G=0.9162	A=0.0838
Latin American 2	Sub	7224	G=0.8938	A=0.1062
South Asian	Sub	5224	G=0.8294	A=0.1706
Other	Sub	9874	G=0.8699	A=0.1301

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	305278	G=0.871976	A=0.128024
Allele Frequency Aggregator	European	Sub	270314	G=0.873103	A=0.126897
Allele Frequency Aggregator	Other	Sub	9074	G=0.8678	A=0.1322
Allele Frequency Aggregator	African	Sub	8384	G=0.9693	A=0.0307
Allele Frequency Aggregator	Latin American 2	Sub	7224	G=0.8938	A=0.1062
Allele Frequency Aggregator	South Asian	Sub	5224	G=0.8294	A=0.1706
Allele Frequency Aggregator	Asian	Sub	3924	G=0.5996	A=0.4004
Allele Frequency Aggregator	Latin American 1	Sub	1134	G=0.9162	A=0.0838
TopMed	Global	Study-wide	264690	G=0.891647	A=0.108353
Genographic Project	Global	Study-wide	205076	G=0.869263	A=0.130737
gnomAD - Genomes	Global	Study-wide	140090	G=0.889635	A=0.110365
gnomAD - Genomes	European	Sub	75862	G=0.86135	A=0.13865
gnomAD - Genomes	African	Sub	42002	G=0.97100	A=0.02900
gnomAD - Genomes	American	Sub	13642	G=0.88352	A=0.11648
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	G=0.8752	A=0.1248
gnomAD - Genomes	East Asian	Sub	3108	G=0.5267	A=0.4733
gnomAD - Genomes	Other	Sub	2152	G=0.8838	A=0.1162
The PAGE Study	Global	Study-wide	78700	G=0.89612	A=0.10388
The PAGE Study	AfricanAmerican	Sub	32516	G=0.97041	A=0.02959
The PAGE Study	Mexican	Sub	10810	G=0.89787	A=0.10213
The PAGE Study	Asian	Sub	8318	G=0.6284	A=0.3716
The PAGE Study	PuertoRican	Sub	7918	G=0.9019	A=0.0981
The PAGE Study	NativeHawaiian	Sub	4534	G=0.8116	A=0.1884
The PAGE Study	Cuban	Sub	4230	G=0.9031	A=0.0969
The PAGE Study	Dominican	Sub	3828	G=0.9394	A=0.0606
The PAGE Study	CentralAmerican	Sub	2448	G=0.9003	A=0.0997
The PAGE Study	SouthAmerican	Sub	1982	G=0.9006	A=0.0994
The PAGE Study	NativeAmerican	Sub	1260	G=0.8960	A=0.1040
The PAGE Study	SouthAsian	Sub	856	G=0.798	A=0.202
14KJPN	JAPANESE	Study-wide	28258	G=0.64491	A=0.35509
8.3KJPN	JAPANESE	Study-wide	16760	G=0.64916	A=0.35084
1000Genomes_30x	Global	Study-wide	6404	G=0.8298	A=0.1702
1000Genomes_30x	African	Sub	1786	G=0.9922	A=0.0078
1000Genomes_30x	Europe	Sub	1266	G=0.8673	A=0.1327
1000Genomes_30x	South Asian	Sub	1202	G=0.7829	A=0.2171
1000Genomes_30x	East Asian	Sub	1170	G=0.5385	A=0.4615
1000Genomes_30x	American	Sub	980	G=0.891	A=0.109
1000Genomes	Global	Study-wide	5008	G=0.8199	A=0.1801
1000Genomes	African	Sub	1322	G=0.9902	A=0.0098
1000Genomes	East Asian	Sub	1008	G=0.5446	A=0.4554
1000Genomes	Europe	Sub	1006	G=0.8598	A=0.1402
1000Genomes	South Asian	Sub	978	G=0.779	A=0.221
1000Genomes	American	Sub	694	G=0.895	A=0.105
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.8355	A=0.1645
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.8708	A=0.1292
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.8843	A=0.1157
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.5935	A=0.4065, C=0.0000
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	G=0.7980	A=0.2020
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	G=0.517	A=0.483
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	G=0.800	A=0.200
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	G=0.854	A=0.146
HGDP-CEPH-db Supplement 1	Europe	Sub	320	G=0.872	A=0.128
HGDP-CEPH-db Supplement 1	Africa	Sub	242	G=0.983	A=0.017
HGDP-CEPH-db Supplement 1	America	Sub	216	G=0.940	A=0.060
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	G=0.97	A=0.03
Korean Genome Project	KOREAN	Study-wide	1832	G=0.5731	A=0.4269
HapMap	Global	Study-wide	1774	G=0.8253	A=0.1747
HapMap	American	Sub	764	G=0.779	A=0.221
HapMap	African	Sub	584	G=0.978	A=0.022
HapMap	Asian	Sub	250	G=0.572	A=0.428
HapMap	Europe	Sub	176	G=0.881	A=0.119
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.857	A=0.143
CNV burdens in cranial meningiomas	Global	Study-wide	788	G=0.537	A=0.463
CNV burdens in cranial meningiomas	CRM	Sub	788	G=0.537	A=0.463
Northern Sweden	ACPOP	Study-wide	600	G=0.813	A=0.187
Qatari	Global	Study-wide	216	G=0.833	A=0.167
A Vietnamese Genetic Variation Database	Global	Study-wide	210	G=0.490	A=0.510
SGDP_PRJ	Global	Study-wide	188	G=0.399	A=0.601
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	64	G=0.81	A=0.19
The Danish reference pan genome	Danish	Study-wide	40	G=0.80	A=0.20
Siberian	Global	Study-wide	28	G=0.43	A=0.57

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 8	NC_000008.11:g.122960828G>A
GRCh38.p14 chr 8	NC_000008.11:g.122960828G>C
GRCh37.p13 chr 8	NC_000008.10:g.123973068G>A
GRCh37.p13 chr 8	NC_000008.10:g.123973068G>C
ZHX2 RefSeqGene	NG_046951.1:g.184480G>A
ZHX2 RefSeqGene	NG_046951.1:g.184480G>C

Gene: ZHX2, zinc fingers and homeoboxes 2 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ZHX2 transcript variant 1	NM_001362797.2:c.4+6800G… NM_001362797.2:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant 2	NM_014943.5:c.*4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X1	XM_005250836.6:c.4+6800G… XM_005250836.6:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X2	XM_011516932.4:c.4+6800G… XM_011516932.4:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X1	XM_047421584.1:c.4+6800G… XM_047421584.1:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X2	XM_047421585.1:c.4+6800G… XM_047421585.1:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X3	XM_047421586.1:c.4+6800G… XM_047421586.1:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X6	XM_047421587.1:c.4+6800G… XM_047421587.1:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X3	XM_047421588.1:c.4+6800G… XM_047421588.1:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X4	XM_047421589.1:c.4+6800G… XM_047421589.1:c.4+6800G>A	N/A	Intron Variant
ZHX2 transcript variant X5	XM_047421590.1:c.4+6800G… XM_047421590.1:c.4+6800G>A	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A	C
GRCh38.p14 chr 8	NC_000008.11:g.122960828=	NC_000008.11:g.122960828G>A	NC_000008.11:g.122960828G>C
GRCh37.p13 chr 8	NC_000008.10:g.123973068=	NC_000008.10:g.123973068G>A	NC_000008.10:g.123973068G>C
ZHX2 RefSeqGene	NG_046951.1:g.184480=	NG_046951.1:g.184480G>A	NG_046951.1:g.184480G>C
ZHX2 transcript variant 1	NM_001362797.2:c.*4+6800=	NM_001362797.2:c.*4+6800G>A	NM_001362797.2:c.*4+6800G>C
ZHX2 transcript	NM_014943.3:c.*4+6800=	NM_014943.3:c.*4+6800G>A	NM_014943.3:c.*4+6800G>C
ZHX2 transcript variant 2	NM_014943.5:c.*4+6800=	NM_014943.5:c.*4+6800G>A	NM_014943.5:c.*4+6800G>C
ZHX2 transcript variant X1	XM_005250836.1:c.*4+6800=	XM_005250836.1:c.*4+6800G>A	XM_005250836.1:c.*4+6800G>C
ZHX2 transcript variant X1	XM_005250836.6:c.*4+6800=	XM_005250836.6:c.*4+6800G>A	XM_005250836.6:c.*4+6800G>C
ZHX2 transcript variant X2	XM_005250837.1:c.*4+6800=	XM_005250837.1:c.*4+6800G>A	XM_005250837.1:c.*4+6800G>C
ZHX2 transcript variant X2	XM_011516932.4:c.*4+6800=	XM_011516932.4:c.*4+6800G>A	XM_011516932.4:c.*4+6800G>C
ZHX2 transcript variant X1	XM_047421584.1:c.*4+6800=	XM_047421584.1:c.*4+6800G>A	XM_047421584.1:c.*4+6800G>C
ZHX2 transcript variant X2	XM_047421585.1:c.*4+6800=	XM_047421585.1:c.*4+6800G>A	XM_047421585.1:c.*4+6800G>C
ZHX2 transcript variant X3	XM_047421586.1:c.*4+6800=	XM_047421586.1:c.*4+6800G>A	XM_047421586.1:c.*4+6800G>C
ZHX2 transcript variant X6	XM_047421587.1:c.*4+6800=	XM_047421587.1:c.*4+6800G>A	XM_047421587.1:c.*4+6800G>C
ZHX2 transcript variant X3	XM_047421588.1:c.*4+6800=	XM_047421588.1:c.*4+6800G>A	XM_047421588.1:c.*4+6800G>C
ZHX2 transcript variant X4	XM_047421589.1:c.*4+6800=	XM_047421589.1:c.*4+6800G>A	XM_047421589.1:c.*4+6800G>C
ZHX2 transcript variant X5	XM_047421590.1:c.*4+6800=	XM_047421590.1:c.*4+6800G>A	XM_047421590.1:c.*4+6800G>C

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

121 SubSNP, 25 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	WI_SSAHASNP	ss13965759	Dec 05, 2003 (119)
2	ILLUMINA	ss66548635	Dec 01, 2006 (127)
3	ILLUMINA	ss66870162	Dec 01, 2006 (127)
4	ILLUMINA	ss66946772	Dec 01, 2006 (127)
5	PERLEGEN	ss69060951	May 18, 2007 (127)
6	ILLUMINA	ss70359086	May 18, 2007 (127)
7	ILLUMINA	ss70465623	May 25, 2008 (130)
8	ILLUMINA	ss70986835	May 18, 2007 (127)
9	ILLUMINA	ss75744847	Dec 07, 2007 (129)
10	HGSV	ss83011795	Dec 15, 2007 (130)
11	KRIBB_YJKIM	ss84906188	Dec 15, 2007 (130)
12	BGI	ss104571519	Dec 01, 2009 (131)
13	ILLUMINA	ss121266398	Dec 01, 2009 (131)
14	ILLUMINA	ss152572055	Dec 01, 2009 (131)
15	GMI	ss156849395	Dec 01, 2009 (131)
16	ILLUMINA	ss159109609	Dec 01, 2009 (131)
17	ILLUMINA	ss159864518	Dec 01, 2009 (131)
18	ILLUMINA	ss169264762	Jul 04, 2010 (132)
19	ILLUMINA	ss169682874	Jul 04, 2010 (132)
20	1000GENOMES	ss234614475	Jul 15, 2010 (132)
21	1000GENOMES	ss241431054	Jul 15, 2010 (132)
22	GMI	ss279991292	May 04, 2012 (137)
23	ILLUMINA	ss479190046	May 04, 2012 (137)
24	ILLUMINA	ss479192369	May 04, 2012 (137)
25	ILLUMINA	ss479524376	Sep 08, 2015 (146)
26	ILLUMINA	ss484396056	May 04, 2012 (137)
27	ILLUMINA	ss536577266	Sep 08, 2015 (146)
28	TISHKOFF	ss561047029	Apr 25, 2013 (138)
29	SSMP	ss655483916	Apr 25, 2013 (138)
30	ILLUMINA	ss778347562	Sep 08, 2015 (146)
31	ILLUMINA	ss782644389	Sep 08, 2015 (146)
32	ILLUMINA	ss783613757	Sep 08, 2015 (146)
33	ILLUMINA	ss825328817	Apr 01, 2015 (144)
34	ILLUMINA	ss831894640	Sep 08, 2015 (146)
35	ILLUMINA	ss832622377	Jul 13, 2019 (153)
36	ILLUMINA	ss833802228	Sep 08, 2015 (146)
37	EVA-GONL	ss986022524	Aug 21, 2014 (142)
38	JMKIDD_LAB	ss1075890918	Aug 21, 2014 (142)
39	1000GENOMES	ss1331780787	Aug 21, 2014 (142)
40	DDI	ss1431661046	Apr 01, 2015 (144)
41	EVA_GENOME_DK	ss1582872195	Apr 01, 2015 (144)
42	EVA_DECODE	ss1595637673	Apr 01, 2015 (144)
43	EVA_UK10K_ALSPAC	ss1621657253	Apr 01, 2015 (144)
44	EVA_UK10K_TWINSUK	ss1664651286	Apr 01, 2015 (144)
45	EVA_SVP	ss1713068336	Apr 01, 2015 (144)
46	ILLUMINA	ss1752710335	Sep 08, 2015 (146)
47	WEILL_CORNELL_DGM	ss1929294869	Feb 12, 2016 (147)
48	ILLUMINA	ss1946245922	Feb 12, 2016 (147)
49	ILLUMINA	ss1959140208	Feb 12, 2016 (147)
50	GENOMED	ss1971086080	Jul 19, 2016 (147)
51	JJLAB	ss2025350882	Sep 14, 2016 (149)
52	USC_VALOUEV	ss2153578990	Dec 20, 2016 (150)
53	HUMAN_LONGEVITY	ss2307110302	Dec 20, 2016 (150)
54	SYSTEMSBIOZJU	ss2627149820	Nov 08, 2017 (151)
55	ILLUMINA	ss2634799147	Nov 08, 2017 (151)
56	ILLUMINA	ss2634799148	Nov 08, 2017 (151)
57	ILLUMINA	ss2635186918	Nov 08, 2017 (151)
58	GRF	ss2709364749	Nov 08, 2017 (151)
59	ILLUMINA	ss2711147751	Nov 08, 2017 (151)
60	GNOMAD	ss2872339089	Nov 08, 2017 (151)
61	AFFY	ss2986091882	Nov 08, 2017 (151)
62	SWEGEN	ss3003946709	Nov 08, 2017 (151)
63	ILLUMINA	ss3022880099	Nov 08, 2017 (151)
64	BIOINF_KMB_FNS_UNIBA	ss3026460731	Nov 08, 2017 (151)
65	CSHL	ss3348389346	Nov 08, 2017 (151)
66	ILLUMINA	ss3625970077	Oct 12, 2018 (152)
67	ILLUMINA	ss3630151189	Oct 12, 2018 (152)
68	ILLUMINA	ss3632695634	Oct 12, 2018 (152)
69	ILLUMINA	ss3633514696	Oct 12, 2018 (152)
70	ILLUMINA	ss3634242021	Oct 12, 2018 (152)
71	ILLUMINA	ss3635188932	Oct 12, 2018 (152)
72	ILLUMINA	ss3635920479	Oct 12, 2018 (152)
73	ILLUMINA	ss3636929401	Oct 12, 2018 (152)
74	ILLUMINA	ss3637673706	Oct 12, 2018 (152)
75	ILLUMINA	ss3638784279	Oct 12, 2018 (152)
76	ILLUMINA	ss3639394951	Oct 12, 2018 (152)
77	ILLUMINA	ss3639728400	Oct 12, 2018 (152)
78	ILLUMINA	ss3640896223	Oct 12, 2018 (152)
79	ILLUMINA	ss3643713505	Oct 12, 2018 (152)
80	ILLUMINA	ss3644979182	Oct 12, 2018 (152)
81	ILLUMINA	ss3653426074	Oct 12, 2018 (152)
82	EGCUT_WGS	ss3671668090	Jul 13, 2019 (153)
83	EVA_DECODE	ss3722943963	Jul 13, 2019 (153)
84	ILLUMINA	ss3726569201	Jul 13, 2019 (153)
85	ACPOP	ss3736072890	Jul 13, 2019 (153)
86	ILLUMINA	ss3744311967	Jul 13, 2019 (153)
87	ILLUMINA	ss3745488791	Jul 13, 2019 (153)
88	EVA	ss3768568915	Jul 13, 2019 (153)
89	PAGE_CC	ss3771466983	Jul 13, 2019 (153)
90	ILLUMINA	ss3772981119	Jul 13, 2019 (153)
91	KHV_HUMAN_GENOMES	ss3811734797	Jul 13, 2019 (153)
92	EVA	ss3831397089	Apr 26, 2020 (154)
93	HGDP	ss3847928684	Apr 26, 2020 (154)
94	SGDP_PRJ	ss3870926395	Apr 26, 2020 (154)
95	KRGDB	ss3918523670	Apr 26, 2020 (154)
96	KOGIC	ss3964779021	Apr 26, 2020 (154)
97	EVA	ss3984611563	Apr 26, 2021 (155)
98	EVA	ss3985386731	Apr 26, 2021 (155)
99	EVA	ss4017412361	Apr 26, 2021 (155)
100	TOPMED	ss4803140884	Apr 26, 2021 (155)
101	TOMMO_GENOMICS	ss5190855952	Apr 26, 2021 (155)
102	EVA	ss5237449479	Apr 26, 2021 (155)
103	1000G_HIGH_COVERAGE	ss5278825949	Oct 16, 2022 (156)
104	GENOGRAPHIC	ss5314530124	Oct 16, 2022 (156)
105	EVA	ss5315361137	Oct 16, 2022 (156)
106	EVA	ss5384247922	Oct 16, 2022 (156)
107	HUGCELL_USP	ss5475220209	Oct 16, 2022 (156)
108	EVA	ss5509541183	Oct 16, 2022 (156)
109	1000G_HIGH_COVERAGE	ss5570104303	Oct 16, 2022 (156)
110	SANFORD_IMAGENETICS	ss5624705083	Oct 16, 2022 (156)
111	SANFORD_IMAGENETICS	ss5646348602	Oct 16, 2022 (156)
112	TOMMO_GENOMICS	ss5733539168	Oct 16, 2022 (156)
113	EVA	ss5799767962	Oct 16, 2022 (156)
114	YY_MCH	ss5810106755	Oct 16, 2022 (156)
115	EVA	ss5831179667	Oct 16, 2022 (156)
116	EVA	ss5847346308	Oct 16, 2022 (156)
117	EVA	ss5848189041	Oct 16, 2022 (156)
118	EVA	ss5856558693	Oct 16, 2022 (156)
119	EVA	ss5890895637	Oct 16, 2022 (156)
120	EVA	ss5975596264	Oct 16, 2022 (156)
121	EVA	ss5979876503	Oct 16, 2022 (156)
122	1000Genomes	NC_000008.10 - 123973068	Oct 12, 2018 (152)
123	1000Genomes_30x	NC_000008.11 - 122960828	Oct 16, 2022 (156)
124	The Avon Longitudinal Study of Parents and Children	NC_000008.10 - 123973068	Oct 12, 2018 (152)
125	Genetic variation in the Estonian population	NC_000008.10 - 123973068	Oct 12, 2018 (152)
126	Genographic Project	NC_000008.11 - 122960828	Oct 16, 2022 (156)
127	The Danish reference pan genome	NC_000008.10 - 123973068	Apr 26, 2020 (154)
128	gnomAD - Genomes	NC_000008.11 - 122960828	Apr 26, 2021 (155)
129	Genome of the Netherlands Release 5	NC_000008.10 - 123973068	Apr 26, 2020 (154)
130	HGDP-CEPH-db Supplement 1	NC_000008.9 - 124042249	Apr 26, 2020 (154)
131	HapMap	NC_000008.11 - 122960828	Apr 26, 2020 (154)
132	KOREAN population from KRGDB	NC_000008.10 - 123973068	Apr 26, 2020 (154)
133	Korean Genome Project	NC_000008.11 - 122960828	Apr 26, 2020 (154)
134	Northern Sweden	NC_000008.10 - 123973068	Jul 13, 2019 (153)
135	The PAGE Study	NC_000008.11 - 122960828	Jul 13, 2019 (153)
136	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000008.10 - 123973068	Apr 26, 2021 (155)
137	CNV burdens in cranial meningiomas	NC_000008.10 - 123973068	Apr 26, 2021 (155)
138	Qatari	NC_000008.10 - 123973068	Apr 26, 2020 (154)
139	SGDP_PRJ	NC_000008.10 - 123973068	Apr 26, 2020 (154)
140	Siberian	NC_000008.10 - 123973068	Apr 26, 2020 (154)
141	8.3KJPN	NC_000008.10 - 123973068	Apr 26, 2021 (155)
142	14KJPN	NC_000008.11 - 122960828	Oct 16, 2022 (156)
143	TopMed	NC_000008.11 - 122960828	Apr 26, 2021 (155)
144	UK 10K study - Twins	NC_000008.10 - 123973068	Oct 12, 2018 (152)
145	A Vietnamese Genetic Variation Database	NC_000008.10 - 123973068	Jul 13, 2019 (153)
146	ALFA	NC_000008.11 - 122960828	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs60277925	May 25, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
606576, ss83011795, ss279991292, ss479190046, ss825328817, ss1595637673, ss1713068336, ss2635186918, ss3639394951, ss3639728400, ss3643713505, ss3847928684	NC_000008.9:124042248:G:A	NC_000008.11:122960827:G:A	(self)
43975623, 24464809, 17406338, 9037132, 10919086, 25701064, 9357755, 612658, 161002, 11336799, 22943375, 6095344, 48825259, 24464809, 5436213, ss234614475, ss241431054, ss479192369, ss479524376, ss484396056, ss536577266, ss561047029, ss655483916, ss778347562, ss782644389, ss783613757, ss831894640, ss832622377, ss833802228, ss986022524, ss1075890918, ss1331780787, ss1431661046, ss1582872195, ss1621657253, ss1664651286, ss1752710335, ss1929294869, ss1946245922, ss1959140208, ss1971086080, ss2025350882, ss2153578990, ss2627149820, ss2634799147, ss2634799148, ss2709364749, ss2711147751, ss2872339089, ss2986091882, ss3003946709, ss3022880099, ss3348389346, ss3625970077, ss3630151189, ss3632695634, ss3633514696, ss3634242021, ss3635188932, ss3635920479, ss3636929401, ss3637673706, ss3638784279, ss3640896223, ss3644979182, ss3653426074, ss3671668090, ss3736072890, ss3744311967, ss3745488791, ss3768568915, ss3772981119, ss3831397089, ss3870926395, ss3918523670, ss3984611563, ss3985386731, ss4017412361, ss5190855952, ss5237449479, ss5315361137, ss5384247922, ss5509541183, ss5624705083, ss5646348602, ss5799767962, ss5831179667, ss5847346308, ss5848189041, ss5975596264, ss5979876503	NC_000008.10:123973067:G:A	NC_000008.11:122960827:G:A	(self)
57630238, 34868, 310244387, 3718223, 21157022, 688452, 67376272, 640518444, 53440206, ss2307110302, ss3026460731, ss3722943963, ss3726569201, ss3771466983, ss3811734797, ss3964779021, ss4803140884, ss5278825949, ss5314530124, ss5475220209, ss5570104303, ss5733539168, ss5810106755, ss5856558693, ss5890895637	NC_000008.11:122960827:G:A	NC_000008.11:122960827:G:A	(self)
ss13965759	NT_008046.14:37191245:G:A	NC_000008.11:122960827:G:A	(self)
ss66548635, ss66870162, ss66946772, ss69060951, ss70359086, ss70465623, ss70986835, ss75744847, ss84906188, ss104571519, ss121266398, ss152572055, ss156849395, ss159109609, ss159864518, ss169264762, ss169682874	NT_008046.16:37246616:G:A	NC_000008.11:122960827:G:A	(self)
25701064, ss3918523670	NC_000008.10:123973067:G:C	NC_000008.11:122960827:G:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs10108684

PMID	Title	Author	Year	Journal
22542470	Genome-wide association study of antibody response to smallpox vaccine.	Ovsyannikova IG et al.	2012	Vaccine

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10108684