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Reference SNP (refSNP) Cluster Report: rs10845840                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:120/151
Map to Genome Build:108/Weight 1
Validation Status:byClusterbyFreqwith2hitwithHapMapFreqWith1000GenomeData
Citation:PubMedLitVarNEW
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:C/T (FWD)
Allele Origin:
Ancestral Allele:T
Variation Viewer:link to VariationViewer
Clinical Significance:NA
MAF/MinorAlleleCount:T=0.3069/1537 (1000 Genomes)
T=0.4163/52275 (TOPMED)
HGVS Names
  • CM000674.2:g.13777923T>C
  • NC_000012.11:g.13930857T>C
  • NC_000012.12:g.13777923T>C
  • NG_031854.1:g.207166A>G
  • NG_031854.2:g.209090A>G
  • NM_000834.3:c.412-24008A>G
  • NM_000834.4:c.412-24008A>G
Links , Linkout
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss281283684 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs10845840 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss15514098SC_SNP|NT_009714.16_6689831byFreqfwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac11/14/0305/17/04120Genomicunknown
ss18972864SC_SNP|SC-CHR9-12_NA07340-200402.chr12.NT_009714.16_6689831fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac02/20/0403/04/04120Genomicunknown
ss19939457CSHL-HAPMAP|CSHL-HuFF-200402.chr12.NT_009714.16_6689831fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac02/21/0403/04/04120Genomicunknown
ss20908869SSAHASNP|WGSA-200403-chr12.chr12.NT_009714.16_6689831fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac03/19/0403/19/04121Genomicunknown
ss66550204ILLUMINA|HumanHap300v1.1_rs10845840fwd/TC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac11/09/0611/09/06127Genomicunknown
ss66904555ILLUMINA|HumanHap550v1.1_rs10845840fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac11/14/0611/14/06127Genomicunknown
ss67027986ILLUMINA|HumanHap650Yv1.0_rs10845840fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac11/14/0611/14/06127Genomicunknown
ss69101613PERLEGEN|PGP00901679byFreqfwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac01/30/0703/31/08127Genomicunknown
ss70381781ILLUMINA|HumanHap300v2.0_rs10845840fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac04/18/0711/18/07127Genomicunknown
ss70502042ILLUMINA|HumanHap550v3.0__rs10845840rev/TA/Ggtagaaccatagcagacaatcaaggcagactaggaaattggaaagagactgagaaaaagt04/20/0703/30/08130Genomicunknown
ss71028108ILLUMINA|HumanHap650Yv3.0_rs10845840fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac04/23/0704/23/07127Genomicunknown
ss74832829AFFY|SNP_M-589886fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac08/09/0708/09/07128Genomicunknown
ss75552050ILLUMINA|ILMN_Human_1M_rs10845840fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac08/28/0708/29/07129Genomicunknown
ss76558199AFFY|AFFY_6_1M_SNP_A-8419321fwd/BC/Ttctttccaatttcctagtctgccttgattgtc08/28/0708/30/07129Genomicunknown
ss85013415KRIBB_YJKIM|KHS874562fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac12/04/0712/08/07130Genomicunknown
ss88982763BCMHGSC_JDW|JWB-0522428byFreqfwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac02/26/0809/05/14129Genomicunknown
ss97208187HUMANGENOME_JCVI|1103649373569fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac03/28/0803/28/08130Genomicunknown
ss106788674BGI|BGI_rs10845840fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac09/16/0810/21/09130Genomicunknown
ss1115210141000GENOMES|CEU.trio.12.15.2008_2681974_chr12_13822124fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac12/17/0812/17/08130Genomicunknown
ss1131973981000GENOMES|NA19240_2008_12_16_2415977_chr12_13822124fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac12/18/0812/18/08130Genomicunknown
ss121400628ILLUMINA|HumanCNV370v1_C_rs10845840fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac04/14/0904/14/09131Genomicunknown
ss133014821ENSEMBL|ENSSNP6920911fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac05/11/0905/14/09131Genomicunknown
ss137526332ENSEMBL|ENSSNP701572fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac12/08/0810/15/09131Genomicunknown
ss152845643ILLUMINA|Human610_Quadv1_B_rs10845840-128_T_R_1501606734rev/TA/Ggtagaaccatagcagacaatcaaggcagactaggaaattggaaagagactgagaaaaagt06/18/0906/19/09131Genomicunknown
ss157142211GMI|GMI_SNP_95992487fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac06/24/0906/25/09131Genomicunknown
ss159147091ILLUMINA|Human660W-Quad_v1_A_rs10845840-128_T_R_1501606734rev/TA/Ggtagaaccatagcagacaatcaaggcagactaggaaattggaaagagactgagaaaaagt07/06/0907/06/09131Genomicunknown
ss159928642ILLUMINA|HumanOmni1-Quad_v1-0_B_rs10845840-128_T_R_1501606734rev/TA/Ggtagaaccatagcagacaatcaaggcagactaggaaattggaaagagactgagaaaaagt08/04/0910/01/09131Genomicunknown
ss167836060COMPLETE_GENOMICS|NA07022_36_chr12_13822124fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac09/30/0909/30/09132Genomicunknown
ss169126258COMPLETE_GENOMICS|NA19240_36_chr12_13822124fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac10/01/0910/01/09132Genomicunknown
ss169662091ILLUMINA|HumanCNV370-Quadv3_C_rs10845840-128_T_R_1501606734rev/TA/Ggtagaaccatagcagacaatcaaggcagactaggaaattggaaagagactgagaaaaagt10/01/0910/02/09132Genomicunknown
ss170632906ILLUMINA|Human1M-Duov3_B_rs10845840-128_T_R_1501606734rev/TA/Ggtagaaccatagcagacaatcaaggcagactaggaaattggaaagagactgagaaaaagt10/01/0910/01/09132Genomicunknown
ss203573349BUSHMAN|BUSHMAN-chr12-13822123fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac02/16/1003/09/10132Genomicunknown
ss208015577BCM-HGSC-SUB|BCM_CMT_1011-2295742fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac03/15/1003/19/10132Genomicunknown
ss2256172951000GENOMES|pilot_1_YRI_7426978_chr12_13822124fwd/C/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac04/22/1004/22/10132Genomicunknown
ss2358327441000GENOMES|pilot_1_CEU_5437373_chr12_13822124fwd/C/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac05/01/1005/01/10132Genomicunknown
ss2424101331000GENOMES|pilot_1_CHB+JPT_4295210_chr12_13822124fwd/C/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac05/01/1005/01/10132Genomicunknown
ss254899809BL|SNP19242_12_13822124fwd/BC/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac08/19/1008/19/10134Genomicunknown
ss281283684GMI|GMI_AK_SNP_5604073fwd/C/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac12/16/1012/16/10137Genomicunknown
ss286510647GMI|GMI_NA10851_SNP_2523438fwd/C/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac12/17/1012/17/10138Genomicunknown
ss291385020PJP|SNP_891378_chr12_13822124fwd/C/Tactttttctcagtctctttccaatttcctagtctgccttgattgtctgctatggttctac01/21/1101/21/11134Genomicunknown
ss479373658ILLUMINA|HumanOmni2.5-4v1_B_rs10845840-128_T_R_1745500393fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt01/30/1210/28/16137Genomicunknown
ss479376857ILLUMINA|HumanOmniExpress-12v1_C_rs10845840-131_T_R_1857160780fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt01/30/1210/27/16137Genomicunknown
ss479780415ILLUMINA|HumanOmni1-Quad_v1-0_C_rs10845840-131_T_R_1865635639fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt01/30/1208/28/15146Genomicunknown
ss484486958ILLUMINA|HumanOmni2.5-4v1_D_rs10845840-131_T_R_1857160780fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt01/30/1210/27/16137Genomicunknown
ss536642843ILLUMINA|HumanOmni5-4v1_B_rs10845840-131_T_R_1891270381fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt06/22/1208/29/15146Genomicunknown
ss563006052TISHKOFF|snp_chr12_13930857fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt11/22/1211/23/12138Genomicunknown
ss658538132SSMP|12_13930857fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt12/14/1202/13/15138Genomicunknown
ss778742841ILLUMINA|HumanOmni25Exome-8v1_A_rs10845840-131_T_R_1865635639fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt05/30/1307/10/15146Genomicunknown
ss782690017ILLUMINA|HumanOmni2.5-4v1_H_rs10845840-131_T_R_1857160780fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt05/30/1307/29/15146Genomicunknown
ss783658310ILLUMINA|HumanOmniExpressExome-8v1_A_rs10845840-131_T_R_1891270381fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt05/31/1306/18/15146Genomicunknown
ss825351335ILLUMINA|HumanCNV370v1_C_rs10845840-121_T_R_IFB1136490849:0fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt06/24/1311/21/14144Genomicunknown
ss831940975ILLUMINA|HumanOmniExpress-12v1_H_rs10845840-131_T_R_1857160780fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt09/17/1306/18/15146Genomicunknown
ss834202443ILLUMINA|HumanOmni2.5-8v1_A_rs10845840-131_T_R_1865635639fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt09/18/1307/29/15146Genomicunknown
ss989259410EVA-GONL|EVA-GONL_rs10845840fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt04/23/1404/25/14142Genomicunknown
ss1078262105JMKIDD_LAB|HGDP_WGS_chr12_13930857fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt07/10/1407/12/14142Genomicunknown
ss13439923571000GENOMES|PHASE3_V1_56911427fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt08/16/1408/16/14142Genomicunknown
ss1426851188DDI|DDI_rs10845840fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt11/04/1411/04/14144Genomicunknown
ss1576126081EVA_GENOME_DK|EVA_GENOME_DK_snv_rs10845840fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt02/19/1502/19/15144Genomicunknown
ss1598929326EVA_DECODE|EVA_DECODE_12_13822124_108747_rs10845840fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt03/02/1503/04/15144Genomicunknown
ss1628054545EVA_UK10K_ALSPAC|EVA_UK10K_ALSPAC_12_13930857_31483713fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt03/04/1503/04/15144Genomicunknown
ss1671048578EVA_UK10K_TWINSUK|EVA_UK10K_TWINSUK_12_13930857_31483713fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt03/04/1503/04/15144Genomicunknown
ss1713308723EVA_SVP|EVA_SVP_1003090fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt03/12/1503/12/15144Genomicunknown
ss1752057122ILLUMINA|OmniExpressExome-8v1-1_B_rs10845840-131_T_R_1891270381fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt05/27/1506/09/15146Genomicunknown
ss1807129539HAMMER_LAB|Hsieh_6150431fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt07/15/1507/16/15146Genomicunknown
ss1932625195WEILL_CORNELL_DGM|SNV:chr12:13930857fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt10/16/1510/17/15147Genomicunknown
ss1967528486GENOMED|rs10845840fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt02/16/1602/16/16147Genomicunknown
ss2027057489JJLAB|SNP7560044fwd/BC/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt08/29/1608/30/16149Genomicunknown
ss2155383119USC_VALOUEV|NC_000012.11:g.13930857T>Cfwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt11/17/1611/17/16150Genomicunknown
ss2187927721HUMAN_LONGEVITY|HLI-12-13777923-T-Cfwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt11/18/1611/18/16150Genomicunknown
ss2351576584TOPMED|12_13930857_T/Cfwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt11/19/1611/19/16150Genomicunknown
ss2628008580SYSTEMSBIOZJU|SYSTEMSBIOZJU_SNV4804343fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt01/06/1701/06/17151Genomicunknown
ss2632928075ILLUMINA|SoL_HCHS_Custom_15041502_B3_RefStrand_rs10845840-131_T_R_1891270fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt02/02/1702/02/17151Genomicunknown
ss2699709221GRF|rs10845840fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt02/13/1702/13/17151Genomicunknown
ss2710754647ILLUMINA|Consortium-OncoArray_15047405_A_rs10845840-131_T_R_1891270381fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt03/22/1703/22/17151Genomicunknown
ss2907571016GNOMAD|rs10845840fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt05/22/1705/22/17151Genomicunknown
ss2985611279AFFY|Axiom_Smokesc1_Affx-7213628fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt05/24/1705/24/17151Genomicunknown
ss3009243290SWEGEN|NC_000012.11:g.13930857T>Cfwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt05/30/1705/30/17151Genomicunknown
ss3027334651BIOINF_KMB_FNS_UNIBA|12.13777923T>Cfwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt07/05/1707/05/17151Genomicunknown
ss3163474777TOPMED|TOPMed_freeze_5?chr12:13,777,923fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt09/30/1709/30/17151Genomicunknown
ss3349934716CSHL|rs10845840fwd/C/Tttctcagtctctttccaatttcctagtctgccttgattgtctgctatggt10/02/1710/02/17151Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs10845840|allelePos=501|totalLen=1001|taxid=9606|snpclass=1|alleles='C/T'|mol=Genomic|build=151
 CAGGAAAGGC AAGTTGGGAA AAGGGAAAGA GGCAGAAGGA AGAGTTAAAG GAGGTCACTA
 TCCACACTGC ACTGAAGTAT TCCGCAATAC CCATCTTCAG AATAAGGACC TGGGAGGAGG
 CAGGGCTGCA GCTGTGGCTG CAAGATCCAC AATGGCTGGG ATTCAAGGCC CCTAAACAAG
 AGAAGGTGCC TAACGCTTGG TGCCTTTCCA TCACTGGCTC CTGGAGAACA TGGGTGATTT
 CTCTTCCAAA GTCTTAGGAT TCCTTAGCCT TTCTCCTTTG TTCTCCTTCC CTAAAGAACA
 CTGATATTCA GAATAGATGC ATCACATATT AAAGGTGCTA AGTATTTGCC TGCAGCTCAC
 AAGCTACAGG TGCTCCTCCC TCTTCTTGGG CAGTCTTATT GGTTTTGGTC CAAACATCAA
 CTCTGAGGCT AGCACAATCT CTCCTAAATT TTTTACAATA TCTGTGGTCT ACTTTTTCTC
 AGTCTCTTTC CAATTTCCTA
 Y
 GTCTGCCTTG ATTGTCTGCT ATGGTTCTAC CTAAAACAAT TGAAATTCAA AGTCAAGCCT
 TAACTGGTTT CTACACAAAG GAGAAAAAAA TCTACCTGTT GCATCCATTC TGTGAGCTTA
 ATAATCTTGC AGACTTGGGT AGACCCAGGG AAAGACCGTG TTGTTGATAG AGTGGACTTT
 CCCTATCTCC ATGGTTGTTC CACACCTCTG ACCCGCTCCT TTCTTCCTCA ATTGTCCTCC
 CATTCTTGAA GATTAAATAT ATGGTTTTCT TATTTTTATC TTATTCATGT AATTCTCTAT
 ATCAAGAACA GCTTCTCCCA CTCTGAATCC CCTCAAACTC TCAGCTTCTA CCCCAGGTGG
 ATTTTTCAAG TTGTTTCTTC TGAAGAATGT ATTACACTCT CTGAAAGGTA TTCTGGAGAA
 CACAACTTTC TTCGATCATA TTACATGATG GTGCAAATCA TATAAAATTA GAGAAGTTAC
 AAGTTACAGT TCCCCATAAG

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_009714 ABBA01067862
dbSNP Blast Analysis

  Population Diversity (Alleles in RefSNP orientation) . See additional population frequency from 1000Genome [here] back to top

Sample AscertainmentGenotype DetailAlleles
ss#PopulationIndividual
Group
Chrom.
Sample Cnt.
SourceC/C
C/T
T/T
HWPC
T
ss133014821ENSEMBL_Watson 2IG 1.00000000 0.500000000.50000000
ss1343992357EAS 1008AF 0.991100010.00890000
EUR 1006AF 0.547699990.45229998
AFR 1322AF 0.487100030.51289999
AMR 694AF 0.714699980.28529999
SAS 978AF 0.798600020.20140000
ss137526332ENSEMBL_Venter 2IG1.00000000 1.00000000
ENSEMBL_celera 2IG1.00000000 1.00000000
ss167836060CEUEuropean 2IG1.00000000 1.00000000
ss169126258YRISub-Saharan African 2IG 1.00000000 0.500000000.50000000
ss203573349BANTU 2IG 1.00000000 0.500000000.50000000
ss225617295pilot_1_YRI_low_coverage_panel 118AF 0.525423710.47457626
ss235832744pilot_1_CEU_low_coverage_panel 120AF 0.533333360.46666667
ss242410133pilot_1_CHB+JPT_low_coverage_panel 120AF 0.991666670.00833333
ss69101613HapMap-CEUEuropean 120IG0.383333330.416666660.200000000.294266000.591666640.40833333
HapMap-HCBAsian 90IG1.00000000 1.00000000
HapMap-JPTAsian 90IG0.977777780.02222222 1.000000000.988888860.01111111
HapMap-YRISub-Saharan African 120IG0.250000000.533333360.216666670.654721000.516666650.48333332
ss88982763HapMap-CEUEuropean 226IG0.292035400.495575220.212389381.000000000.539823000.46017700
HapMap-HCBAsian 90IG1.00000000 1.00000000
HapMap-JPTAsian 172IG0.988372090.01162791 1.000000000.994186040.00581395
HapMap-YRISub-Saharan African 226IG0.247787610.522123870.230088500.654721000.508849560.49115044
HAPMAP-ASW 98IG0.428571430.367346940.204081640.150222000.612244900.38775510
HAPMAP-CHD 170IG0.988235290.01176471 1.000000000.994117620.00588235
HAPMAP-GIH 176IG0.522727250.454545470.022727270.050043000.750000000.25000000
HAPMAP-LWK 180IG0.300000010.477777780.222222220.751830000.538888870.46111110
HAPMAP-MEX 100IG0.519999980.440000000.040000000.317310000.740000010.25999999
HAPMAP-MKK 286IG0.258741260.482517480.258741260.751830000.500000000.50000000
HAPMAP-TSI 176IG0.261363630.454545470.284090910.402784000.488636370.51136363
ss97208187J. Craig Venter 2IG1.00000000 1.00000000

SummaryAverage
Het.+/- std err:
Individual
Count
Founders
Count
Individual
Overlap
Genotype
Conflict
Additional Freq. Data
0.425+/-0.1780000ALFRED: The Allele Frequency Database

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byClusterbyFreqwith2hitwithHapMapFreqWith1000GenomeData
DoubleHit found by:  BCM_SSAHASNP
UNKNOWNUNKNOWNUNKNOWN

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