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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS27540.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
27540.1 |
Public |
Mus musculus |
15 |
Ly6a |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 27540.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000023248.12 |
ENSMUSP00000023248.6 |
Accepted |
alive |
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EBI |
ENSMUST00000187171.1 |
ENSMUSP00000140099.1 |
Accepted |
alive |
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EBI |
ENSMUST00000187994.6 |
ENSMUSP00000140287.1 |
Accepted |
alive |
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EBI |
ENSMUST00000189068.6 |
ENSMUSP00000140638.1 |
Accepted |
alive |
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EBI |
ENSMUST00000186526.6 |
ENSMUSP00000140998.1 |
Accepted |
alive |
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NCBI |
NM_001271416.1 |
NP_001258345.1 |
Accepted |
alive |
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NCBI |
NM_001271417.1 |
NP_001258346.1 |
Accepted |
alive |
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NCBI |
NM_001271418.1 |
NP_001258347.1 |
Accepted |
alive |
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NCBI |
NM_001271419.1 |
NP_001258348.1 |
Accepted |
alive |
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NCBI |
NM_001271446.1 |
NP_001258375.1 |
Accepted |
alive |
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NCBI |
NM_010738.3 |
NP_034868.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 27540.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (405 nt): ATGGACACTTCTCACACTACAAAGTCCTGTTTGCTGATTCTTCTTGTGGCCCTACTGTGTGCAGAAAGAG CTCAGGGACTGGAGTGTTACCAGTGCTATGGAGTCCCATTTGAGACTTCTTGCCCATCAATTACCTGCCC CTACCCTGATGGAGTCTGTGTTACTCAGGAGGCAGCAGTTATTGTGGATTCTCAAACAAGGAAAGTAAAG AACAATCTTTGCTTACCCATCTGCCCTCCTAATATTGAAAGTATGGAGATCCTGGGTACTAAGGTCAACG TGAAGACTTCCTGTTGCCAGGAAGACCTCTGCAATGTAGCAGTTCCCAATGGAGGCAGCACCTGGACCAT GGCAGGGGTGCTTCTGTTCAGCCTGAGCTCAGTCCTCCTGCAGACCTTGCTCTGA
Translation (134 aa): MDTSHTTKSCLLILLVALLCAERAQGLECYQCYGVPFETSCPSITCPYPDGVCVTQEAAVIVDSQTRKVK NNLCLPICPPNIESMEILGTKVNVKTSCCQEDLCNVAVPNGGSTWTMAGVLLFSLSSVLLQTLL
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