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Report for CCDS21099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21099.1 Public Mus musculus 7 Psenen 21 106 86 CCDS HistoryNCBI Gene:66340Re-query CCDS DB by CCDS ID:21099.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21099.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000043898 ENSMUSP00000044682 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043898Link to Ensembl Protein Viewer:ENSMUSP00000044682Re-query CCDS DB by Nucleotide ID:ENSMUST00000043898Re-query CCDS DB by Protein ID:ENSMUSP00000044682
Original member Current member EBI,WTSI ENSMUST00000207747 ENSMUSP00000146675 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207747Link to Ensembl Protein Viewer:ENSMUSP00000146675Re-query CCDS DB by Nucleotide ID:ENSMUST00000207747Re-query CCDS DB by Protein ID:ENSMUSP00000146675
Original member Current member EBI,WTSI OTTMUST00000145726 OTTMUSP00000075922 Accepted alive Link to Vega Transcript Viewer:OTTMUST00000145726Link to Vega Protein Viewer:OTTMUSP00000075922Re-query CCDS DB by Nucleotide ID:OTTMUST00000145726Re-query CCDS DB by Protein ID:OTTMUSP00000075922
Original member Current member EBI,WTSI OTTMUST00000145727 OTTMUSP00000075923 Accepted alive Link to Vega Transcript Viewer:OTTMUST00000145727Link to Vega Protein Viewer:OTTMUSP00000075923Re-query CCDS DB by Nucleotide ID:OTTMUST00000145727Re-query CCDS DB by Protein ID:OTTMUSP00000075923
Original member Current member NCBI NM_025498.2 NP_079774.1 Accepted alive Link to Nucleotide Sequence:NM_025498.2Link to Protein Sequence:NP_079774.1Re-query CCDS DB by Nucleotide ID:NM_025498Re-query CCDS DB by Protein ID:NP_079774Link to BLink:NP_079774.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079774.1 101 Q9CQR7 101 100% 0 0

Chromosomal Locations for CCDS 21099.1

Assembly GRCm38.p4 (GCF_000001635.24)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to NCBI Map Viewer on chromosome 7Link to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7Link to Vega Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30561995 30562134 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7Link to Vega Genome Browser on chromosome 7
7 30562324 30562428 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7Link to Vega Genome Browser on chromosome 7
7 30562796 30562856 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7Link to Vega Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (306 nt):
ATGAACTTGGAGCGGGTATCCAATGAGGAGAAGTTGAACCTGTGCCGGAAGTACTATCTTGGTGGATTTG
CG
TTCCTGCCTTTTCTTTGGTTAGTCAACATTTTCTGGTTCTTCAGAGAGGCGTTCCTCGCCCCAGCCTA
C
ACAGAGCAGAGCCAAATCAAAGGCTATGTTTGGCGCTCAGCTGTGGGCTTCCTCTTCTGGGTGATCATT
CTC
GCCACCTGGATCACCATCTTCCAGATCTACCGGCCCCGCTGGGGCGCTCTTGGGGACTACCTCTCCT
TC
ACCATTCCCCTGGGCACTCCCTAA


Translation (101 aa):
MNLERVSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLAPAYTEQSQIKGYVWRSAVGFLFWVII
L
ATWITIFQIYRPRWGALGDYLSFTIPLGTP




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