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Report for CCDS14376.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14376.1 Public Homo sapiens X ZXDA 24 110 108 CCDS HistoryNCBI Gene:7789Re-query CCDS DB by CCDS ID:14376.1Re-query CCDS DB by GeneID:7789See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14376.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358697.6 ENSP00000351530.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358697.6Link to Ensembl Protein Viewer:ENSP00000351530.4Re-query CCDS DB by Nucleotide ID:ENST00000358697Re-query CCDS DB by Protein ID:ENSP00000351530
Original member Current member NCBI NM_007156.5 NP_009087.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007156.5Link to Protein Sequence:NP_009087.1Re-query CCDS DB by Nucleotide ID:NM_007156Re-query CCDS DB by Protein ID:NP_009087Link to BLAST:NP_009087.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009087.1 799 P98168 799 100% 0 0

Chromosomal Locations for CCDS 14376.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 57908021 57910420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2400 nt):
ATGGAAATCCCGAAGCTGCTCCCGGCTCGCGGGACACTACAGGGCGGCGGCGGCGGCGGTATCCCCGCGG
GTGGCGGCCGAGTCCACCGAGGCCCTGACTCGCCGGCTGGCCAGGTCCCCACGCGCCGCCTCCTGCTGCC
CCGGGGCCCCCAAGATGGCGGGCCCGGGCGGCGGCGCGAGGAGGCCAGCACGGCATCACGGGGCCCTGGC
CCAAGCCTGTTCGCGCCGAGGCCCCATCAACCTAGCGGCGGCGGCGACGACTTCTTCCTGGTGCTGCTTG
ACCCGGTGGGTGGCGACGTGGAGACCGCGGGCTCCGGTCAGGCCGCAGGGCCTGTGTTGAGGGAGGAGGC
CAAGGCGGGCCCGGGGCTCCAGGGGGACGAGAGCGGCGCGAACCCCGCGGGCTGCTCTGCGCAGGGCCCC
CACTGCCTGTCCGCGGTTCCCACTCCGGCCCCGATCTCCGCCCCCGGCCCCGCCGCGGCCTTCGCGGGCA
CAGTCACTATCCACAACCAGGACCTGCTGTTGCGCTTTGAGAACGGCGTCCTCACCCTGGCCACGCCCCC
ACCACACGCCTGGGAGCCAGGGGCCGCTCCTGCCCAGCAGCCCAGGTGTCTGATCGCCCCCCAAGCTGGG
TTCCCGCAAGCCGCGCACCCGGGTGACTGCCCAGAGCTGCGGTCCGACCTCCTGCTAGCCGAGCCCGCAG
AACCCGCGCCTGCTCCGGCGCCCCAGGAGGAGGCGGAGGGCCTGGCCGCCGCCCTGGGCCCCCGCGGACT
GCTGGGCTCTGGTCCAGGCGTGGTGCTGTACCTGTGCCCCGAGGCGCTGTGCGGGCAAACCTTCGCCAAG
AAGCACCAGCTGAAGATGCACCTGCTGACGCACAGCAGCAGCCAGGGCCAGAGGCCCTTCAAATGCCCCC
TGGGTGGCTGCGGCTGGACCTTCACCACCTCTTACAAGCTCAAGAGGCACCTGCAGTCGCACGATAAACT
GCGGCCCTTCGGCTGCCCTGCGGAGGGCTGTGGCAAGAGCTTCACCACCGTGTACAACCTCAAGGCGCAC
ATGAAGGGCCATGAGCAGGAGAACTCGTTCAAATGTGAGGTGTGCGAGGAGAGCTTCCCCACGCAGGCCA
AACTCGGCGCCCACCAGCGCAGCCACTTCGAACCCGAGAGGCCTTACCAGTGCGCGTTTTCTGGCTGCAA
GAAGACATTTATCACAGTGAGTGCTCTGTTTTCCCATAACCGCGCCCATTTCAGGGAACAGGAACTGTTT
TCCTGCTCTTTCCCTGGCTGCAGCAAGCAATATGACAAGGCTTGTAGGCTGAAAATTCACCTGCGGAGTC
ACACCGGCGAGAGACCTTTCCTTTGTGACTTTGATGGCTGTGGCTGGAACTTCACCAGCATGTCCAAACT
CTTAAGGCACAAAAGGAAGCACGACGATGACCGGAGGTTCATGTGCCCTGTGGAAGGCTGTGGGAAATCT
TTCACGAGGGCCGAACATCTGAAAGGCCACAGCATTACCCACCTGGGCACAAAGCCTTTCGTGTGTCCTG
TGGCAGGCTGCTGTGCCAGGTTCTCTGCTCGCAGTAGCCTCTACATTCACTCCAAGAAACACCTGCAGGA
TGTGGACACTTGGAAAAGCCGTTGCCCGATCTCCTCTTGTAATAAACTCTTCACATCCAAGCACAGCATG
AAGACGCACATGGTTAAAAGGCATAAGGTGGGCCAGGATCTCTTAGCTCAGCTAGAAGCAGCAAATTCTC
TTACACCCAGCAGTGAACTTACCAGCCAGAGACAGAATGATCTCAGTGATGCAGAGATAGTGTCTCTCTT
CTCTGATGTACCTGACAGTACTTCTGCTGCATTGCTGGACACAGCATTGGTGAACTCTGGAATCTTGACT
ATTGATGTGGCTTCTGTGAGCTCGACTCTGGCAGGGCACCTCCCTGCTAATAATAATAATTCCGTAGGGC
AGGCTGTGGACCCTCCGTCCTTGATGGCCACCAGCGACCCTCCTCAAAGTCTGGATACCTCTCTCTTTTT
TGGAACGGCGGCCACTGGTTTTCAGCAGAGCTCCTTAAATATGGATGAGGTCTCAAGTGTAAGTGTGGGG
CCATTGGGATCTCTGGACTCTTTGGCCATGAAAAACTCCAGTCCAGAGCCTCAGGCTTTGACACCCAGCA
GTAAGCTAACAGTGGACACAGATACTCTGACTCCTTCGAGCACCCTTTGTGAAAACAGTGTCTCAGAACT
ACTGACACCAGCCAAAGCGGAGTGGAGCGTACATCCTAACTCTGACTTCTTTGGACAGGAGGGAGAAACC
CAGTTTGGATTCCCCAATGCAGCAGGAAACCATGGTTCTCAGAAAGAAAGAAATCTTATCACTGTGACTG
GCAGCTCATTTTTGGTATGA

Translation (799 aa):
MEIPKLLPARGTLQGGGGGGIPAGGGRVHRGPDSPAGQVPTRRLLLPRGPQDGGPGRRREEASTASRGPG
PSLFAPRPHQPSGGGDDFFLVLLDPVGGDVETAGSGQAAGPVLREEAKAGPGLQGDESGANPAGCSAQGP
HCLSAVPTPAPISAPGPAAAFAGTVTIHNQDLLLRFENGVLTLATPPPHAWEPGAAPAQQPRCLIAPQAG
FPQAAHPGDCPELRSDLLLAEPAEPAPAPAPQEEAEGLAAALGPRGLLGSGPGVVLYLCPEALCGQTFAK
KHQLKMHLLTHSSSQGQRPFKCPLGGCGWTFTTSYKLKRHLQSHDKLRPFGCPAEGCGKSFTTVYNLKAH
MKGHEQENSFKCEVCEESFPTQAKLGAHQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELF
SCSFPGCSKQYDKACRLKIHLRSHTGERPFLCDFDGCGWNFTSMSKLLRHKRKHDDDRRFMCPVEGCGKS
FTRAEHLKGHSITHLGTKPFVCPVAGCCARFSARSSLYIHSKKHLQDVDTWKSRCPISSCNKLFTSKHSM
KTHMVKRHKVGQDLLAQLEAANSLTPSSELTSQRQNDLSDAEIVSLFSDVPDSTSAALLDTALVNSGILT
IDVASVSSTLAGHLPANNNNSVGQAVDPPSLMATSDPPQSLDTSLFFGTAATGFQQSSLNMDEVSSVSVG
PLGSLDSLAMKNSSPEPQALTPSSKLTVDTDTLTPSSTLCENSVSELLTPAKAEWSVHPNSDFFGQEGET
QFGFPNAAGNHGSQKERNLITVTGSSFLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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