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Report for CCDS12497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12497.1 Public Homo sapiens 19 ZNF345 24 110 108 CCDS HistoryNCBI Gene:25850Re-query CCDS DB by CCDS ID:12497.1Re-query CCDS DB by GeneID:25850See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12497.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331800.9 ENSP00000331120.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331800.9Link to Ensembl Protein Viewer:ENSP00000331120.5Re-query CCDS DB by Nucleotide ID:ENST00000331800Re-query CCDS DB by Protein ID:ENSP00000331120
Original member Current member EBI ENST00000529555.1 ENSP00000431202.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529555.1Link to Ensembl Protein Viewer:ENSP00000431202.1Re-query CCDS DB by Nucleotide ID:ENST00000529555Re-query CCDS DB by Protein ID:ENSP00000431202
Original member Current member EBI ENST00000420450.6 ENSP00000431216.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000420450.6Link to Ensembl Protein Viewer:ENSP00000431216.1Re-query CCDS DB by Nucleotide ID:ENST00000420450Re-query CCDS DB by Protein ID:ENSP00000431216
Original member Current member EBI ENST00000532141.6 ENSP00000431289.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532141.6Link to Ensembl Protein Viewer:ENSP00000431289.2Re-query CCDS DB by Nucleotide ID:ENST00000532141Re-query CCDS DB by Protein ID:ENSP00000431289
Original member Current member EBI ENST00000589046.1 ENSP00000465431.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589046.1Link to Ensembl Protein Viewer:ENSP00000465431.1Re-query CCDS DB by Nucleotide ID:ENST00000589046Re-query CCDS DB by Protein ID:ENSP00000465431
Original member Current member NCBI NM_001242472.2 NP_001229401.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001242472.2Link to Protein Sequence:NP_001229401.1Re-query CCDS DB by Nucleotide ID:NM_001242472Re-query CCDS DB by Protein ID:NP_001229401Link to BLAST:NP_001229401.1
Original member Current member NCBI NM_001242474.2 NP_001229403.1 Accepted alive Link to Nucleotide Sequence:NM_001242474.2Link to Protein Sequence:NP_001229403.1Re-query CCDS DB by Nucleotide ID:NM_001242474Re-query CCDS DB by Protein ID:NP_001229403Link to BLAST:NP_001229403.1
Original member Current member NCBI NM_001242475.2 NP_001229404.1 Accepted alive Link to Nucleotide Sequence:NM_001242475.2Link to Protein Sequence:NP_001229404.1Re-query CCDS DB by Nucleotide ID:NM_001242475Re-query CCDS DB by Protein ID:NP_001229404Link to BLAST:NP_001229404.1
Original member Current member NCBI NM_001242476.2 NP_001229405.1 Accepted alive Link to Nucleotide Sequence:NM_001242476.2Link to Protein Sequence:NP_001229405.1Re-query CCDS DB by Nucleotide ID:NM_001242476Re-query CCDS DB by Protein ID:NP_001229405Link to BLAST:NP_001229405.1
Original member Current member NCBI NM_003419.5 NP_003410.1 Accepted alive Link to Nucleotide Sequence:NM_003419.5Link to Protein Sequence:NP_003410.1Re-query CCDS DB by Nucleotide ID:NM_003419Re-query CCDS DB by Protein ID:NP_003410Link to BLAST:NP_003410.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229401.1 488 Q14585 488 100% 0 0
NP_001229403.1 488 Q14585 488 100% 0 0
NP_001229404.1 488 Q14585 488 100% 0 0
NP_001229405.1 488 Q14585 488 100% 0 0
NP_003410.1 488 Q14585 488 100% 0 0

Chromosomal Locations for CCDS 12497.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36876831 36878297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1467 nt):
ATGGAAAACCTTACAAAACACAGCATTGAGTGTTCAAGTTTCAGAGGTGATTGGGAATGTAAAAACCAGT
TTGAGAGAAAACAGGGATCTCAGGAAGGACATTTCAGTGAAATGATATTTACTCCTGAAGACATGCCCAC
TTTCAGTATCCAGCATCAGAGAATTCATACTGATGAGAAACTCCTTGAATGTAAGGAATGTGGGAAGGAT
TTTAGTTTTGTATCAGTCCTTGTTCGACATCAGCGAATTCATACTGGTGAGAAACCTTATGAATGCAAAG
AATGTGGCAAGGCCTTTGGTAGTGGTGCAAACCTTGCTTACCATCAAAGAATTCATACTGGTGAGAAGCC
TTTTGAATGTAAAGAATGTGGGAAGGCCTTTGGTAGTGGCTCAAACCTTACTCACCATCAGAGAATTCAT
ACTGGTGAGAAACCCTATGAGTGTAAGGAATGTGGGAAAGCCTTTAGTTTTGGATCAGGCCTTATTCGAC
ATCAGATCATTCACAGTGGTGAGAAGCCTTATGAGTGTAAGGAATGTGGGAAGTCCTTTAGTTTTGAATC
AGCCCTTATTCGGCATCACAGAATTCACACAGGTGAGAAACCTTATGAATGTATAGATTGTGGTAAAGCC
TTTGGCAGTGGTTCAAACCTTACTCAACATCGGCGGATTCATACTGGTGAGAAACCTTATGAATGCAAAG
CATGTGGAATGGCCTTTAGCAGTGGTTCGGCTCTTACTCGGCATCAGAGAATTCATACCGGTGAGAAACC
ATATATATGTAATGAATGTGGTAAGGCCTTTAGTTTTGGATCAGCCCTTACTCGACATCAAAGAATTCAT
ACTGGTGAGAAACCTTATGTATGTAAGGAATGTGGGAAGGCTTTTAATAGTGGCTCAGATCTCACTCAGC
ATCAGAGAATTCACACTGGTGAGAAACCCTATGAGTGTAAGGAGTGTGAGAAAGCCTTTAGAAGTGGTTC
AAAACTTATTCAGCATCAAAGAATGCATACTGGAGAGAAACCTTATGAATGTAAGGAATGTGGGAAGACC
TTTAGTAGTGGTTCAGACCTTACTCAACATCACAGAATTCATACTGGTGAGAAACCCTATGAATGTAAGG
AATGTGGGAAGGCCTTTGGTAGTGGCTCAAAACTTATCCAACACCAGCTAATCCATACTGGTGAAAGACC
CTATGAATGTAAAGAATGTGGAAAGTCCTTTAGTAGTGGTTCAGCTCTTAATCGGCACCAGAGAATACAC
ACTGGTGAGAAACCCTATGAATGTAAGGAGTGTGGGAAGGCTTTTTATAGTGGCTCAAGCCTTACTCAGC
ATCAGAGAATTCATACAGGTGAGAAACTTTATGAATGTAAGAACTGTGGGAAGGCTTATGGGAGGGATTC
AGAGTTTCAGCAACATAAGAAAAGTCATAATGGTAAGAAACTCTGCGAATTGGAAACTATAAATTGA

Translation (488 aa):
MENLTKHSIECSSFRGDWECKNQFERKQGSQEGHFSEMIFTPEDMPTFSIQHQRIHTDEKLLECKECGKD
FSFVSVLVRHQRIHTGEKPYECKECGKAFGSGANLAYHQRIHTGEKPFECKECGKAFGSGSNLTHHQRIH
TGEKPYECKECGKAFSFGSGLIRHQIIHSGEKPYECKECGKSFSFESALIRHHRIHTGEKPYECIDCGKA
FGSGSNLTQHRRIHTGEKPYECKACGMAFSSGSALTRHQRIHTGEKPYICNECGKAFSFGSALTRHQRIH
TGEKPYVCKECGKAFNSGSDLTQHQRIHTGEKPYECKECEKAFRSGSKLIQHQRMHTGEKPYECKECGKT
FSSGSDLTQHHRIHTGEKPYECKECGKAFGSGSKLIQHQLIHTGERPYECKECGKSFSSGSALNRHQRIH
TGEKPYECKECGKAFYSGSSLTQHQRIHTGEKLYECKNCGKAYGRDSEFQQHKKSHNGKKLCELETIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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