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Report for CCDS32140.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32140.1 Public Homo sapiens 14 TTC7B 24 110 108 CCDS HistoryNCBI Gene:145567Re-query CCDS DB by CCDS ID:32140.1Re-query CCDS DB by GeneID:145567See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32140.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328459.11 ENSP00000336127.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328459.11Link to Ensembl Protein Viewer:ENSP00000336127.4Re-query CCDS DB by Nucleotide ID:ENST00000328459Re-query CCDS DB by Protein ID:ENSP00000336127
Original member Current member NCBI NM_001010854.2 NP_001010854.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010854.2Link to Protein Sequence:NP_001010854.1Re-query CCDS DB by Nucleotide ID:NM_001010854Re-query CCDS DB by Protein ID:NP_001010854Link to BLAST:NP_001010854.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010854.1 843 Q86TV6-1 843 100% 0 0

Chromosomal Locations for CCDS 32140.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 90541368 90541589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90578106 90578308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90593486 90593626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90610742 90610839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90617929 90618045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90644048 90644208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90646951 90647023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90652841 90652898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90654993 90655110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90657174 90657278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90658304 90658387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90676523 90676660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90680472 90680535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90689540 90689712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90695500 90695578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90730075 90730196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90744792 90744922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90780738 90780906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90786174 90786328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90816175 90816295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2532 nt):
ATGGCGACCAAGAAGGCAGGCTCGCGGCTGGAGACGGAGATCGAGCGCTGCCGCTCCGAGTGCCAGTGGG
AGCGGATCCCTGAGCTCGTCAAGCAGCTGTCGGCCAAGCTCATCGCCAACGATGACATGGCAGAGCTTCT
CCTCGGGGAGTCGAAGCTGGAGCAGTACCTGAAGGAACACCCCCTGAGGCAGGGGGCCAGTCCCCGAGGC
CCCAAGCCCCAGCTGACTGAGGTCCGCAAGCATCTGACCGCCGCCCTGGACCGAGGGAACCTTAAGTCAG
AATTCCTACAAGAATCCAATCTGATCATGGCCAAGTTGAATTATGTGGAAGGTGATTATAAAGAAGCTCT
GAACATTTACGCCCGGGTGGGCCTGGACGATCTGCCACTGACAGCTGTCCCGCCCTACAGGCTGCGGGTG
ATCGCAGAAGCCTACGCTACCAAAGGACTTTGTTTGGAGAAGCTGCCTATTTCTTCTTCTACCAGTAATC
TCCATGTGGACCGGGAACAGGATGTCATCACCTGTTATGAGAAAGCAGGGGACATCGCACTCCTGTATCT
CCAAGAGATAGAAAGGGTAATACTTTCTAATATTCAAAACAGAAGCCCTAAGCCTGGCCCTGCTCCCCAC
GATCAAGAACTAGGTTTTTTCCTAGAAACAGGACTTCAGAGAGCCCATGTCCTCTATTTCAAAAATGGGA
ACTTGACAAGAGGAGTCGGAAGATTTAGAGAGCTTCTCAGAGCAGTTGAAACAAGAACGACTCAAAACCT
GCGAATGACAATAGCCAGGCAGCTGGCAGAGATCTTGTTGCGGGGTATGTGTGAGCAGAGCTACTGGAAC
CCTCTGGAGGATCCACCGTGCCAGTCACCTCTGGACGATCCTCTCCGCAAAGGAGCAAACACAAAAACCT
ACACTCTCACTCGGAGAGCCCGTGTCTACTCAGGAGAGAACATTTTTTGTCCTCAAGAAAATACGGAAGA
AGCCCTGTTGTTATTGCTGATTAGTGAATCAATGGCCAACCGGGACGCTGTGCTGAGCAGGATACCTGAA
CACAAGAGTGACCGCCTCATCAGTCTGCAGAGTGCATCTGTGGTCTATGACTTACTCACCATTGCTCTTG
GAAGAAGAGGCCAGTATGAGATGCTGTCAGAGTGCCTAGAAAGAGCCATGAAGTTTGCCTTTGAGGAATT
CCACCTGTGGTACCAGTTTGCTCTGTCCCTGATGGCTGCTGGAAAATCTGCCCGTGCCGTGAAGGTGCTG
AAAGAGTGTATCCGCCTGAAGCCAGACGATGCCACCATCCCTCTCCTCGCTGCCAAGCTCTGCATGGGCT
CCCTGCACTGGTTGGAAGAGGCTGAAAAGTTTGCCAAAACTGTCGTTGATGTGGGAGAGAAAACGTCAGA
GTTCAAGGCCAAAGGCTACTTAGCTCTGGGGCTCACGTACAGTCTGCAGGCCACTGACGCTTCTTTGCGA
GGGATGCAGGAGGTCCTACAGAGAAAGGCGCTTCTTGCATTTCAGAGGGCCCACAGCCTGTCACCCACAG
ATCACCAAGCAGCTTTCTACCTGGCTCTGCAGCTTGCCATCTCCAGACAGATCCCAGAGGCTCTGGGGTA
TGTCCGCCAAGCTCTTCAGCTTCAAGGTGACGATGCCAACTCCCTGCACCTCCTTGCCCTCCTGCTGTCA
GCACAGAAGCATTACCATGACGCTCTGAACATCATCGACATGGCCCTGAGTGAATACCCAGAAAATTTCA
TACTACTGTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCGGACGAGGCACTGCTGACTTGTAA
GCACATGCTGCAGATATGGAAATCCTGCTACAACCTCACCAACCCCAGTGATTCTGGACGTGGGAGCAGC
CTCTTAGATAGAACCATTGCTGACAGACGACAGCTTAATACAATTACTTTGCCAGACTTCAGCGATCCCG
AGACAGGCTCCGTCCATGCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCACTGTCGGAAGTGGCTTC
GTCTCTGCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCTGGCACAGATCTGGCTC
CATGCAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCA
ACCTCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTCCGGGGAAGCATGGA
CGAGGCGCGGCGGTGGTATGAAGAGGCCTTAGCCATCAGCCCCACCCACGTGAAGAGCATGCAGCGACTG
GCCCTGATCCTTCACCAGCTAGGCCGCTACAGTCTGGCGGAGAAGATCCTCCGGGACGCGGTGCAGGTGA
ACTCGACAGCCCACGAGGTCTGGAACGGGCTGGGCGAGGTCCTCCAAGCTCAGGGCAACGATGCGGCGGC
TACGGAGTGCTTCCTGACAGCCTTGGAGCTGGAGGCCAGCAGCCCCGCCGTGCCCTTCACCATCATCCCC
CGCGTGCTCTGA

Translation (843 aa):
MATKKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQYLKEHPLRQGASPRG
PKPQLTEVRKHLTAALDRGNLKSEFLQESNLIMAKLNYVEGDYKEALNIYARVGLDDLPLTAVPPYRLRV
IAEAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPH
DQELGFFLETGLQRAHVLYFKNGNLTRGVGRFRELLRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWN
PLEDPPCQSPLDDPLRKGANTKTYTLTRRARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPE
HKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVL
KECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDVGEKTSEFKAKGYLALGLTYSLQATDASLR
GMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLS
AQKHYHDALNIIDMALSEYPENFILLFSKVKLQSLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSS
LLDRTIADRRQLNTITLPDFSDPETGSVHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWL
HAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQIAELRGSMDEARRWYEEALAISPTHVKSMQRL
ALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIP
RVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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