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Report for CCDS43988.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43988.1 Public Homo sapiens X THOC2 24 110 108 CCDS HistoryNCBI Gene:57187Re-query CCDS DB by CCDS ID:43988.1Re-query CCDS DB by GeneID:57187See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43988.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000245838.13 ENSP00000245838.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000245838.13Link to Ensembl Protein Viewer:ENSP00000245838.8Re-query CCDS DB by Nucleotide ID:ENST00000245838Re-query CCDS DB by Protein ID:ENSP00000245838
Original member Current member EBI ENST00000355725.8 ENSP00000347959.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355725.8Link to Ensembl Protein Viewer:ENSP00000347959.4Re-query CCDS DB by Nucleotide ID:ENST00000355725Re-query CCDS DB by Protein ID:ENSP00000347959
Original member Current member NCBI NM_001081550.2 NP_001075019.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001081550.2Link to Protein Sequence:NP_001075019.1Re-query CCDS DB by Nucleotide ID:NM_001081550Re-query CCDS DB by Protein ID:NP_001075019Link to BLAST:NP_001075019.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001075019.1 1593 Q8NI27-1 1593 100% 0 0

Chromosomal Locations for CCDS 43988.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 123610936 123610963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123611440 123611516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123613399 123613556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123613639 123613708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123614052 123614189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123619401 123619436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123620907 123620965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123621157 123621587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123622758 123622860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123623105 123623283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123623787 123623971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123624060 123624191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123624541 123624669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123625912 123626069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123626521 123626662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123627693 123627968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123631688 123631852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123632861 123633040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123633953 123634070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123636079 123636175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123638043 123638123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123638934 123639027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123640538 123640622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123644575 123644676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123644779 123644909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123645334 123645375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123665642 123665837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123667106 123667278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123668159 123668314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123671669 123671761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123686548 123686714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123696021 123696154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123696721 123696842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123697681 123697751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123703454 123703505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123706858 123706949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123712850 123712908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 123732952 123733022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4782 nt):
ATGGCGGCCGCGGCTGTGGTGGTTCCCGCAGAGTGGATAAAGAACTGGGAGAAATCAGGGAGAGGCGAAT
TTTTGCATTTATGTCGGATCCTCAGTGAAAATAAAAGCCATGATAGTTCAACATACAGAGATTTCCAGCA
AGCTCTCTATGAGTTGTCATATCATGTAATTAAAGGAAATCTAAAGCATGAACAGGCATCTAATGTTCTT
AGTGACATTAGTGAATTTCGTGAGGATATGCCCTCCATTCTTGCTGATGTATTCTGCATATTAGACATTG
AGACAAATTGTTTAGAAGAAAAAAGCAAGAGAGACTATTTTACACAGTTGGTATTAGCATGTTTGTATTT
AGTTTCAGACACAGTTCTAAAGGAACGCCTGGATCCAGAAACACTGGAATCATTAGGGCTTATCAAACAA
TCACAGCAATTCAATCAAAAGTCAGTTAAAATCAAGACAAAACTCTTTTATAAGCAGCAAAAATTCAATT
TGTTAAGAGAAGAGAATGAAGGTTATGCCAAGCTGATTGCTGAATTGGGGCAAGATTTATCTGGAAGTAT
TACTAGTGATTTAATCTTAGAAAATATCAAATCTTTAATAGGATGCTTTAATCTGGATCCCAATAGAGTT
TTGGATGTCATTTTAGAAGTGTTTGAATGCAGGCCAGAACACGATGACTTCTTTATATCTTTGTTAGAAT
CTTACATGAGTATGTGTGAACCGCAAACACTGTGTCATATTCTTGGGTTCAAATTCAAGTTTTACCAGGA
ACCAAATGGCGAGACACCATCATCTTTATACAGAGTTGCAGCAGTACTTCTACAATTTAATCTTATTGAT
TTAGATGATCTTTATGTACATCTTCTTCCGGCTGATAATTGCATTATGGATGAACACAAACGAGAAATTG
CGGAAGCTAAGCAAATTGTTAGAAAGCTTACGATGGTTGTGTTGTCTTCTGAAAAAATGGATGAGCGAGA
GAAAGAAAAGGAAAAAGAAGAGGAGAAAGTAGAGAAACCACCTGATAACCAAAAACTTGGCTTGTTGGAA
GCCTTATTAAAGATTGGTGATTGGCAACATGCACAGAACATTATGGATCAGATGCCTCCATACTATGCAG
CTTCACACAAGCTAATAGCCCTTGCTATTTGCAAGCTCATTCATATAACTATTGAGCCTCTCTACCGAAG
AGTTGGAGTTCCTAAAGGTGCTAAAGGCTCACCTGTTAATGCTTTGCAAAACAAGAGAGCACCAAAACAA
GCTGAGAGCTTTGAAGATTTGAGGAGAGACGTGTTCAATATGTTCTGTTACCTTGGTCCTCACCTTTCTC
ACGATCCCATTTTATTTGCAAAAGTGGTGCGCATAGGCAAGTCATTTATGAAGGAGTTTCAGTCTGATGG
AAGCAAACAAGAAGATAAAGAAAAAACGGAAGTTATCCTTAGCTGTTTGCTTAGCATTACTGACCAGGTA
CTACTTCCATCTCTTTCTTTGATGGACTGCAATGCTTGTATGTCTGAGGAACTATGGGGAATGTTTAAAA
CATTTCCATATCAGCATAGATATCGTCTGTATGGCCAGTGGAAGAATGAAACTTATAACAGTCACCCACT
TTTAGTAAAAGTTAAAGCTCAAACAATAGACAGAGCCAAATATATCATGAAGCGCCTAACCAAGGAAAAT
GTGAAGCCTTCTGGAAGACAAATTGGGAAGTTGAGCCACAGCAATCCAACCATTTTGTTTGATTATATCT
TGTCACAAATACAGAAGTATGATAACTTAATAACACCTGTAGTAGATTCATTGAAATACCTCACTTCACT
GAATTATGATGTCTTGGCCTATTGTATCATTGAAGCTTTAGCTAATCCAGAAAAGGAAAGAATGAAACAT
GATGACACAACCATCTCAAGCTGGCTTCAGAGTCTGGCTAGTTTCTGTGGTGCAGTTTTTCGTAAATATC
CAATTGATCTTGCTGGTCTTCTTCAGTATGTTGCCAATCAGCTAAAGGCGGGCAAAAGTTTTGACCTGCT
TATATTGAAAGAAGTGGTACAAAAAATGGCAGGAATAGAAATTACAGAGGAAATGACAATGGAGCAACTA
GAGGCTATGACTGGTGGAGAGCAGCTAAAAGCTGAGGGTGGTTATTTTGGTCAGATCAGAAACACTAAAA
AATCCTCTCAGAGATTAAAGGATGCTCTATTGGACCATGATCTTGCCCTTCCTCTCTGTCTGCTTATGGC
TCAGCAGAGAAATGGGGTAATCTTTCAGGAAGGTGGAGAGAAACATTTGAAACTTGTGGGAAAGCTCTAT
GACCAGTGTCATGATACCCTGGTGCAGTTTGGTGGGTTTTTAGCATCTAATCTGAGCACAGAAGATTATA
TAAAGCGAGTGCCTTCAATTGATGTACTCTGTAATGAATTTCATACACCCCATGATGCAGCATTTTTCCT
GTCTAGGCCAATGTATGCCCATCATATTTCGTCAAAGTATGATGAACTTAAAAAATCAGAAAAGGGAAGT
AAACAGCAACATAAAGTTCATAAGTACATTACATCATGTGAGATGGTGATGGCGCCTGTCCATGAAGCAG
TGGTCTCCTTACATGTTTCCAAAGTCTGGGATGACATCAGCCCTCAATTCTATGCTACATTCTGGTCATT
GACAATGTATGACCTTGCAGTTCCACACACCAGCTATGAACGAGAAGTCAATAAACTTAAAGTCCAGATG
AAAGCAATTGATGACAATCAGGAAATGCCCCCAAATAAAAAGAAAAAAGAGAAGGAGCGCTGTACTGCCC
TTCAGGACAAGCTTCTTGAAGAAGAAAAGAAACAGATGGAACATGTACAGAGAGTTCTACAGAGATTGAA
ACTGGAAAAGGACAACTGGCTTTTAGCAAAATCTACCAAAAATGAGACCATCACAAAATTTCTACAGCTG
TGTATATTTCCTCGATGTATTTTTTCAGCAATTGATGCTGTTTACTGTGCTCGTTTTGTTGAATTGGTAC
ATCAACAGAAAACTCCAAATTTTTCCACACTTCTTTGCTATGATCGAGTTTTCTCTGACATAATTTACAC
AGTTGCAAGCTGTACTGAAAATGAAGCCAGTCGATACGGAAGGTTTCTTTGCTGCATGTTAGAGACTGTG
ACCAGGTGGCATAGTGATAGAGCCACATATGAAAAGGAATGTGGAAACTATCCAGGATTCCTTACCATAT
TACGGGCAACTGGATTTGATGGTGGAAATAAGGCTGATCAATTAGACTATGAAAATTTTCGACATGTTGT
ACATAAATGGCATTACAAACTAACCAAGGCATCGGTACATTGCCTTGAAACAGGCGAATATACTCACATC
AGGAATATCTTGATTGTGCTAACAAAAATACTTCCTTGGTACCCAAAAGTTTTGAATCTGGGTCAAGCTT
TGGAAAGAAGAGTACACAAAATCTGCCAAGAAGAAAAAGAGAAGAGGCCAGATCTATATGCATTGGCTAT
GGGCTACTCTGGGCAGTTGAAAAGTAGAAAGTCATACATGATACCTGAAAATGAGTTTCATCACAAAGAC
CCCCCTCCGAGGAATGCAGTTGCCAGTGTGCAAAATGGGCCTGGTGGTGGGCCTTCTTCATCATCAATAG
GAAGTGCATCTAAATCGGATGAAAGCAGTACTGAGGAGACTGATAAATCAAGGGAGAGATCTCAGTGTGG
TGTGAAAGCTGTTAATAAAGCTTCTAGTACCACACCTAAAGGGAATTCAAGCAATGGAAATAGTGGCTCT
AACAGCAACAAAGCTGTTAAAGAAAATGACAAAGAAAAAGGGAAAGAGAAAGAAAAAGAGAAAAAAGAAA
AGACTCCAGCTACTACTCCAGAGGCCAGGGTACTTGGTAAAGATGGTAAAGAAAAACCAAAGGAAGAGCG
GCCAAATAAAGATGAAAAAGCAAGAGAGACCAAGGAAAGAACGCCGAAGTCTGACAAAGAGAAAGAAAAA
TTCAAGAAGGAAGAAAAAGCTAAAGATGAGAAATTTAAGACCACTGTCCCCAACGCAGAATCAAAATCAA
CTCAAGAAAGGGAAAGAGAGAAGGAGCCATCCAGAGAAAGAGATATAGCAAAGGAAATGAAATCAAAGGA
AAATGTTAAAGGAGGAGAAAAAACACCAGTTTCTGGGTCCTTGAAATCACCTGTTCCCAGATCAGATATT
CCAGAGCCTGAAAGGGAACAAAAACGCCGCAAAATTGATACTCACCCTTCTCCATCACATTCCTCCACAG
TAAAGGACAGTCTCATCGAACTCAAGGAATCTTCAGCAAAGCTCTACATTAATCATACTCCTCCACCACT
GTCCAAGAGTAAGGAGAGAGAAATGGACAAGAAAGATTTGGACAAGTCAAGGGAAAGATCCAGAGAAAGA
GAGAAAAAAGATGAAAAGGACAGGAAAGAGCGGAAAAGGGATCACTCAAACAACGACCGTGAAGTGCCAC
CGGACTTAACCAAGAGACGTAAAGAGGAGAATGGAACAATGGGGGTTTCAAAACATAAAAGTGAAAGTCC
TTGTGAATCTCCTTATCCAAATGAGAAAGACAAGGAAAAAAATAAGTCAAAATCTTCAGGCAAAGAAAAA
GGCAGTGATTCATTTAAATCTGAGAAGATGGATAAAATCTCCTCCGGTGGCAAAAAGGAGTCCAGGCATG
ATAAAGAAAAGATAGAAAAGAAAGAGAAACGGGACAGTTCAGGAGGAAAGGAAGAGAAGAAACATCATAA
GTCCTCGGACAAGCACAGATAA

Translation (1593 aa):
MAAAAVVVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGNLKHEQASNVL
SDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQ
SQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGSITSDLILENIKSLIGCFNLDPNRV
LDVILEVFECRPEHDDFFISLLESYMSMCEPQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLID
LDDLYVHLLPADNCIMDEHKREIAEAKQIVRKLTMVVLSSEKMDEREKEKEKEEEKVEKPPDNQKLGLLE
ALLKIGDWQHAQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVILSCLLSITDQV
LLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKEN
VKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKH
DDTTISSWLQSLASFCGAVFRKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQL
EAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLY
DQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYEREVNKLKVQM
KAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQL
CIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETV
TRWHSDRATYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHI
RNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKD
PPPRNAVASVQNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGS
NSNKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKERTPKSDKEKEK
FKKEEKAKDEKFKTTVPNAESKSTQEREREKEPSRERDIAKEMKSKENVKGGEKTPVSGSLKSPVPRSDI
PEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYINHTPPPLSKSKEREMDKKDLDKSRERSRER
EKKDEKDRKERKRDHSNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEK
GSDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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