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Report for CCDS31515.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31515.1 Public Homo sapiens 11 OR5F1 24 110 108 CCDS HistoryNCBI Gene:338674Re-query CCDS DB by CCDS ID:31515.1Re-query CCDS DB by GeneID:338674See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31515.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278409.1 ENSP00000278409.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278409.1Link to Ensembl Protein Viewer:ENSP00000278409.1Re-query CCDS DB by Nucleotide ID:ENST00000278409Re-query CCDS DB by Protein ID:ENSP00000278409
Original member Current member NCBI NM_003697.1 NP_003688.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003697.1Link to Protein Sequence:NP_003688.1Re-query CCDS DB by Nucleotide ID:NM_003697Re-query CCDS DB by Protein ID:NP_003688Link to BLAST:NP_003688.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003688.1 314 O95221 314 100% 0 0

Chromosomal Locations for CCDS 31515.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 55993681 55994625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGACCAGAAAAAATTATACCTCACTGACTGAGTTCGTCCTATTGGGATTAGCAGACACGCTGGAGCTAC
AG
ATTATCCTCTTTTTGTTTTTTCTTGTGATTTATACACTTACAGTACTGGGAAATCTCGGGATGATCCT
C
TTAATCAGGATCGATTCCCAGCTTCACACACCCATGTATTTCTTCCTGGCTAACCTGTCCTTTGTGGAC
GTT
TGTAACTCAACTACCATCACCCCAAAGATGCTGGCAGATTTATTATCAGAGAAGAAAACCATCTCTT
TT
GCTGGCTGCTTCCTACAGATGTACTTCTTTATCTCCCTGGCGACAACCGAATGCATCCTCTTTGGGTT
A
ATGGCCTATGACAGGTATGCGGCCATATGTCGCCCGCTGCTTTACTCCTTGATCATGTCCAGGACCGTC
TAC
CTAAAAATGGCAGCCGGGGCTTTTGCTGCAGGGTTGCTGAACTTCATGGTCAACACAAGCCATGTCA
GC
AGCTTGTCATTCTGTGACTCCAATGTCATCCATCACTTCTTCTGTGACAGTCCCCCACTTTTCAAGCT
C
TCTTGTTCTGACACAATCCTGAAAGAAAGCATAAGTTCTATTTTGGCTGGTGTGAATATTGTGGGGACT
CTG
CTTGTCATCCTCTCCTCCTACTCCTACGTTCTCTTCTCCATTTTTTCTATGCATTCGGGGGAGGGGA
GG
CACAGAGCTTTCTCCACGTGTGCCTCTCACCTGACAGCCATAATTCTGTTCTATGCCACCTGCATCTA
T
ACTTACCTGAGACCTAGTTCCAGCTACTCCCTGAATCAGGACAAAGTGGCTTCTGTGTTCTACACAGTG
GTG
ATTCCCATGTTGAATCCTCTGATCTACAGCCTCAGGAGTAAGGAAGTAAAGAAGGCTTTAGCGAATG
TA
ATTAGCAGGAAAAGGACCTCTTCCTTTCTGTGA


Translation (314 aa):
MTRKNYTSLTEFVLLGLADTLELQIILFLFFLVIYTLTVLGNLGMILLIRIDSQLHTPMYFFLANLSFVD
V
CNSTTITPKMLADLLSEKKTISFAGCFLQMYFFISLATTECILFGLMAYDRYAAICRPLLYSLIMSRTV
Y
LKMAAGAFAAGLLNFMVNTSHVSSLSFCDSNVIHHFFCDSPPLFKLSCSDTILKESISSILAGVNIVGT
L
LVILSSYSYVLFSIFSMHSGEGRHRAFSTCASHLTAIILFYATCIYTYLRPSSSYSLNQDKVASVFYTV
V
IPMLNPLIYSLRSKEVKKALANVISRKRTSSFL




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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