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Report for CCDS4187.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4187.1 Public Homo sapiens 5 NEUROG1 24 110 108 CCDS HistoryNCBI Gene:4762Re-query CCDS DB by CCDS ID:4187.1Re-query CCDS DB by GeneID:4762See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4187.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314744.6 ENSP00000317580.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314744.6Link to Ensembl Protein Viewer:ENSP00000317580.4Re-query CCDS DB by Nucleotide ID:ENST00000314744Re-query CCDS DB by Protein ID:ENSP00000317580
Original member Current member NCBI NM_006161.3 NP_006152.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006161.3Link to Protein Sequence:NP_006152.2Re-query CCDS DB by Nucleotide ID:NM_006161Re-query CCDS DB by Protein ID:NP_006152Link to BLAST:NP_006152.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006152.2 237 Q92886 237 100% 0 0

Chromosomal Locations for CCDS 4187.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 135534977 135535690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (714 nt):
ATGCCAGCCCGCCTTGAGACCTGCATCTCCGACCTCGACTGCGCCAGCAGCAGCGGCAGTGACCTATCCG
GCTTCCTCACCGACGAGGAAGACTGTGCCAGACTCCAACAGGCAGCCTCCGCTTCGGGGCCGCCCGCGCC
GGCCCGCAGGGGCGCGCCCAATATCTCCCGGGCGTCTGAGGTTCCAGGGGCACAGGACGACGAGCAGGAG
AGGCGGCGGCGCCGCGGCCGGACGCGGGTCCGCTCCGAGGCGCTGCTGCACTCGCTGCGCAGGAGCCGGC
GCGTCAAGGCCAACGATCGCGAGCGCAACCGCATGCACAACTTGAACGCGGCCCTGGACGCACTGCGCAG
CGTGCTGCCCTCGTTCCCCGACGACACCAAGCTCACCAAAATCGAGACGCTGCGCTTCGCCTACAACTAC
ATCTGGGCTCTGGCCGAGACACTGCGCCTGGCGGATCAAGGGCTGCCCGGAGGCGGTGCCCGGGAGCGCC
TCCTGCCGCCGCAGTGCGTCCCCTGCCTGCCCGGTCCCCCAAGCCCCGCCAGCGACGCGGAGTCCTGGGG
CTCAGGTGCCGCCGCCGCCTCCCCGCTCTCTGACCCCAGTAGCCCAGCCGCCTCCGAAGACTTCACCTAC
CGCCCCGGCGACCCTGTTTTCTCCTTCCCAAGCCTGCCCAAAGACTTGCTCCACACAACGCCCTGTTTCA
TTCCTTACCACTAG

Translation (237 aa):
MPARLETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASEVPGAQDDEQE
RRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNY
IWALAETLRLADQGLPGGGARERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLSDPSSPAASEDFTY
RPGDPVFSFPSLPKDLLHTTPCFIPYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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