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Report for CCDS44682.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44682.1 Public Homo sapiens 11 NEU3 22 109 92 CCDS HistoryNCBI Gene:10825Re-query CCDS DB by CCDS ID:44682.1Re-query CCDS DB by GeneID:10825See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44682.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENST00000294064.8 ENSP00000294064.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000294064.8Link to Ensembl Protein Viewer:ENSP00000294064.4Re-query CCDS DB by Nucleotide ID:ENST00000294064Re-query CCDS DB by Protein ID:ENSP00000294064
Original member Current member EBI,WTSI ENST00000531509.5 ENSP00000432097.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531509.5Link to Ensembl Protein Viewer:ENSP00000432097.1Re-query CCDS DB by Nucleotide ID:ENST00000531509Re-query CCDS DB by Protein ID:ENSP00000432097
Original member NCBI NM_006656.5 NP_006647.3 Updated not alive Link to Nucleotide Sequence:NM_006656.5Link to Protein Sequence:NP_006647.3Re-query CCDS DB by Nucleotide ID:NM_006656Re-query CCDS DB by Protein ID:NP_006647
Current member NCBI NM_006656.6 NP_006647.3 Accepted alive Link to Nucleotide Sequence:NM_006656.6Link to Protein Sequence:NP_006647.3Re-query CCDS DB by Nucleotide ID:NM_006656Re-query CCDS DB by Protein ID:NP_006647Link to BLAST:NP_006647.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006647.3 461 Q9UQ49-2 461 100% 0 0

Chromosomal Locations for CCDS 44682.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 74989061 74989154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74994509 74994720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75005413 75006492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGAGACCTGCGGACCTGCCCCCGCGCCCCATGGAAGAATCCCCGGCGTCCAGCTCTGCCCCGACAGAGA
CG
GAGGAGCCGGGGTCCAGTGCAGAGGTCATGGAAGAAGTGACAACATGCTCCTTCAACAGCCCTCTGTT
C
CGGCAGGAAGATGACAGAGGGATTACCTACCGGATCCCAGCCCTGCTCTACATACCCCCCACCCACACC
TTC
CTGGCCTTTGCAGAGAAGCGTTCTACGAGGAGAGATGAGGATGCTCTCCACCTGGTGCTGAGGCGAG
GG
TTGAGGATTGGGCAGTTGGTACAGTGGGGGCCCCTGAAGCCACTGATGGAAGCCACACTACCGGGGCA
T
CGGACCATGAACCCCTGTCCTGTATGGGAGCAGAAGAGTGGTTGTGTGTTCCTGTTCTTCATCTGTGTG
CGG
GGCCATGTCACAGAGCGTCAACAGATTGTGTCAGGCAGGAATGCTGCCCGCCTTTGCTTCATCTACA
GT
CAGGATGCTGGATGTTCATGGAGTGAGGTGAGGGACTTGACTGAGGAGGTCATTGGCTCAGAGCTGAA
G
CACTGGGCCACATTTGCTGTGGGCCCAGGTCATGGCATCCAGCTGCAGTCAGGGAGACTGGTCATCCCT
GCG
TATACCTACTACATCCCTTCCTGGTTCTTTTGCTTCCAGCTACCATGTAAAACCAGGCCTCATTCTC
TG
ATGATCTACAGTGATGACCTAGGGGTCACATGGCACCATGGTAGACTCATTAGGCCCATGGTTACAGT
A
GAATGTGAAGTGGCAGAGGTGACTGGGAGGGCTGGCCACCCTGTGCTATATTGCAGTGCCCGGACACCA
AAC
AGGTGCCGGGCAGAGGCGCTCAGCACTGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAGTCGAC
AG
CTCTGTGAGCCCCCACATGGTTGCCAAGGGAGTGTGGTAAGTTTCCGGCCCCTGGAGATCCCACATAG
G
TGCCAGGACTCTAGCAGCAAAGATGCACCCACCATTCAGCAGAGCTCTCCAGGCAGTTCACTGAGGCTG
GAG
GAGGAAGCTGGAACACCGTCAGAATCATGGCTCTTGTACTCACACCCAACCAGTAGGAAACAGAGGG
TT
GACCTAGGTATCTATCTCAACCAGACCCCCTTGGAGGCTGCCTGCTGGTCCCGCCCCTGGATCTTGCA
C
TGTGGGCCCTGTGGCTACTCTGATCTGGCTGCTCTGGAGGAGGAGGGCTTGTTTGGGTGTTTGTTTGAA
TGT
GGGACCAAGCAAGAGTGTGAGCAGATTGCCTTCCGCCTGTTTACACACCGGGAGATCCTGAGTCACC
TG
CAGGGGGACTGCACCAGCCCTGGTAGGAACCCAAGCCAATTCAAAAGCAATTAA


Translation (461 aa):
MRPADLPPRPMEESPASSSAPTETEEPGSSAEVMEEVTTCSFNSPLFRQEDDRGITYRIPALLYIPPTHT
F
LAFAEKRSTRRDEDALHLVLRRGLRIGQLVQ
WGPLKPLMEATLPGHRTMNPCPVWEQKSGCVFLFFICV
R
GHVTERQQIVSGRNAARLCFIYSQDAGCSWSEVRDLTEEVIGSELKHWATFAVGPGHGIQLQSGRLVIP
A
YTYYIPSWFFCFQLPCKTRPHSLMIYSDDLGVTWHHGRLIRPMVTVECEVAEVTGRAGHPVLYCSARTP
N
RCRAEALSTDHGEGFQRLALSRQLCEPPHGCQGSVVSFRPLEIPHRCQDSSSKDAPTIQQSSPGSSLRL
E
EEAGTPSESWLLYSHPTSRKQRVDLGIYLNQTPLEAACWSRPWILHCGPCGYSDLAALEEEGLFGCLFE
C
GTKQECEQIAFRLFTHREILSHLQGDCTSPGRNPSQFKSN




Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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