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Report for CCDS30555.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30555.1 Public Homo sapiens 1 CPTP 24 110 108 CCDS HistoryNCBI Gene:80772Re-query CCDS DB by CCDS ID:30555.1Re-query CCDS DB by GeneID:80772See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30555.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343938.9 ENSP00000343890.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343938.9Link to Ensembl Protein Viewer:ENSP00000343890.4Re-query CCDS DB by Nucleotide ID:ENST00000343938Re-query CCDS DB by Protein ID:ENSP00000343890
Original member Current member NCBI NM_001029885.2 NP_001025056.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001029885.2Link to Protein Sequence:NP_001025056.1Re-query CCDS DB by Nucleotide ID:NM_001029885Re-query CCDS DB by Protein ID:NP_001025056Link to BLAST:NP_001025056.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025056.1 214 Q5TA50 214 100% 0 0

Chromosomal Locations for CCDS 30555.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 1326911 1327032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1327241 1327763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGGATGACTCGGAGACAGGTTTCAATCTGAAAGTCGTCCTGGTCAGTTTCAAGCAGTGTCTCGATGAGA
AGGAAGAGGTCTTGCTGGACCCCTACATTGCCAGCTGGAAGGGCCTGGTCAGGTTTCTGAACAGCCTGGG
CACCATCTTCTCATTCATCTCCAAGGACGTGGTCTCCAAGCTGCGGATCATGGAGCGCCTCAGGGGCGGC
CCGCAGAGCGAGCACTACCGCAGCCTGCAGGCCATGGTGGCCCACGAGCTGAGCAACCGGCTGGTGGACC
TGGAGCGCCGCTCCCACCACCCGGAGTCTGGCTGCCGGACGGTGCTGCGCCTGCACCGCGCCCTGCACTG
GCTGCAGCTGTTCCTGGAGGGCCTGCGTACCAGCCCCGAGGACGCACGCACCTCCGCGCTCTGCGCCGAC
TCCTACAACGCCTCGCTGGCCGCCTACCACCCCTGGGTCGTGCGCCGCGCCGTCACCGTGGCCTTCTGCA
CGCTGCCCACACGCGAGGTCTTCCTGGAGGCCATGAACGTGGGGCCCCCGGAGCAGGCCGTGCAGATGCT
AGGCGAGGCCCTCCCCTTCATCCAGCGTGTCTACAACGTCTCCCAGAAGCTCTACGCCGAGCACTCCCTG
CTGGACCTGCCCTAG

Translation (214 aa):
MDDSETGFNLKVVLVSFKQCLDEKEEVLLDPYIASWKGLVRFLNSLGTIFSFISKDVVSKLRIMERLRGG
PQSEHYRSLQAMVAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCAD
SYNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNVGPPEQAVQMLGEALPFIQRVYNVSQKLYAEHSL
LDLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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