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Report for CCDS11307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11307.1 Public Homo sapiens 17 CCL3 22 109 92 CCDS HistoryNCBI Gene:6348Re-query CCDS DB by CCDS ID:11307.1Re-query CCDS DB by GeneID:6348See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11307.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENST00000613922.1 ENSP00000477908.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613922.1Link to Ensembl Protein Viewer:ENSP00000477908.1Re-query CCDS DB by Nucleotide ID:ENST00000613922Re-query CCDS DB by Protein ID:ENSP00000477908
Original member NCBI NM_002983.2 NP_002974.1 Updated not alive Link to Nucleotide Sequence:NM_002983.2Link to Protein Sequence:NP_002974.1Re-query CCDS DB by Nucleotide ID:NM_002983Re-query CCDS DB by Protein ID:NP_002974
Current member NCBI NM_002983.3 NP_002974.1 Accepted alive Link to Nucleotide Sequence:NM_002983.3Link to Protein Sequence:NP_002974.1Re-query CCDS DB by Nucleotide ID:NM_002983Re-query CCDS DB by Protein ID:NP_002974Link to BLAST:NP_002974.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002974.1 92 P10147 92 100% 0 0

Chromosomal Locations for CCDS 11307.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 36088672 36088762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36089183 36089297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36089986 36090058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (279 nt):
ATGCAGGTCTCCACTGCTGCCCTTGCTGTCCTCCTCTGCACCATGGCTCTCTGCAACCAGTTCTCTGCAT
CA
CTTGCTGCTGACACGCCGACCGCCTGCTGCTTCAGCTACACCTCCCGGCAGATTCCACAGAATTTCAT
A
GCTGACTACTTTGAGACGAGCAGCCAGTGCTCCAAGCCCGGTGTCATCTTCCTAACCAAGCGAAGCCGG
CAG
GTCTGTGCTGACCCCAGTGAGGAGTGGGTCCAGAAATATGTCAGCGACCTGGAGCTGAGTGCCTGA


Translation (92 aa):
MQVSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKPGVIFLTKRSR
Q
VCADPSEEWVQKYVSDLELSA




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser