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Report for CCDS9341.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9341.1 Public Homo sapiens 13 B3GLCT 24 110 108 CCDS HistoryNCBI Gene:145173Re-query CCDS DB by CCDS ID:9341.1Re-query CCDS DB by GeneID:145173See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9341.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343307.5 ENSP00000343002.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343307.5Link to Ensembl Protein Viewer:ENSP00000343002.4Re-query CCDS DB by Nucleotide ID:ENST00000343307Re-query CCDS DB by Protein ID:ENSP00000343002
Original member Current member NCBI NM_194318.4 NP_919299.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_194318.4Link to Protein Sequence:NP_919299.3Re-query CCDS DB by Nucleotide ID:NM_194318Re-query CCDS DB by Protein ID:NP_919299Link to BLAST:NP_919299.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_919299.3 498 Q6Y288 498 100% 0 0

Chromosomal Locations for CCDS 9341.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 31200085 31200154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31215051 31215100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31222952 31222991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31229185 31229294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31247023 31247099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31247855 31247966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31260946 31261082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31269214 31269277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31274509 31274628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31276702 31276771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31284648 31284761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31286720 31286819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31317566 31317685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31323751 31323895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 31329501 31329668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGCGGCCGCCCGCCTGCTGGTGGCTGCTCGCGCCGCCGGCGCTGCTCGCGCTCCTCACCTGCTCCCTGG
CTTTTGGTTTGGCTTCTGAAGATACAAAGAAAGAGGTCAAGCAGTCTCAGGATTTGGAGAAAAGTGGTAT
ATCAAGGAAAAATGACATAGACTTAAAAGGAATTGTATTCGTCATCCAGAGTCAAAGTAATTCTTTTCAT
GCAAAGAGAGCAGAGCAGTTAAAAAAAAGCATCTTAAAGCAGGCTGCAGATCTTACACAGGAGCTCCCCA
GTGTCCTCCTCCTTCATCAGCTGGCTAAACAAGAAGGTGCATGGACCATACTTCCGTTGTTACCGCATTT
TTCTGTAACATATAGCAGAAATTCATCTTGGATTTTCTTCTGTGAAGAAGAGACAAGAATACAGATTCCA
AAACTCTTGGAAACCCTCAGAAGATATGACCCCTCTAAGGAATGGTTTTTGGGAAAAGCATTACATGATG
AAGAAGCTACAATAATTCACCATTATGCCTTTTCCGAGAATCCTACAGTTTTTAAGTATCCAGACTTTGC
TGCAGGCTGGGCCTTAAGTATTCCACTTGTAAACAAGCTTACCAAGAGACTAAAGAGTGAATCCTTGAAA
TCCGACTTTACAATAGATTTAAAACATGAGATTGCCCTCTACATCTGGGACAAAGGCGGAGGACCTCCCC
TGACCCCAGTGCCTGAGTTTTGTACCAATGACGTGGACTTCTACTGTGCTACCACATTCCATTCTTTTCT
ACCGCTTTGTAGAAAGCCAGTGAAGAAGAAGGATATTTTTGTTGCAGTAAAAACATGCAAGAAATTTCAT
GGTGACAGAATACCTATTGTTAAGCAGACTTGGGAGAGCCAGGCAAGTCTCATTGAATACTATAGTGACT
ATACTGAAAATTCCATTCCTACTGTGGATTTGGGAATTCCTAATACAGATAGAGGTCATTGTGGAAAGAC
ATTTGCCATTTTGGAAAGATTTCTGAATCGTAGCCAGGACAAAACAGCATGGTTAGTCATTGTGGATGAT
GATACATTAATAAGTATCTCCAGGCTCCAGCACTTGCTTAGCTGTTATGACTCCGGCGAGCCTGTGTTTC
TGGGAGAGCGCTACGGCTACGGCCTGGGCACTGGTGGCTACAGCTACATCACGGGAGGAGGAGGAATGGT
CTTCAGCAGAGAAGCCGTCAGGAGACTTCTCGCCAGTAAATGTCGATGCTACAGCAATGATGCTCCCGAT
GATATGGTCCTGGGAATGTGCTTTAGTGGCTTGGGAATCCCTGTGACACACAGCCCTCTCTTCCATCAGG
CTCGGCCGGTGGATTACCCTAAGGACTACCTTTCTCATCAAGTTCCCATATCGTTCCACAAACACTGGAA
CATCGATCCAGTGAAGGTGTATTTCACATGGTTGGCACCCAGTGACGAAGACAAAGCCAGGCAGGAGACA
CAGAAAGGTTTTCGAGAGGAGTTATAA

Translation (498 aa):
MRPPACWWLLAPPALLALLTCSLAFGLASEDTKKEVKQSQDLEKSGISRKNDIDLKGIVFVIQSQSNSFH
AKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQEGAWTILPLLPHFSVTYSRNSSWIFFCEEETRIQIP
KLLETLRRYDPSKEWFLGKALHDEEATIIHHYAFSENPTVFKYPDFAAGWALSIPLVNKLTKRLKSESLK
SDFTIDLKHEIALYIWDKGGGPPLTPVPEFCTNDVDFYCATTFHSFLPLCRKPVKKKDIFVAVKTCKKFH
GDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWLVIVDD
DTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRRLLASKCRCYSNDAPD
DMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAPSDEDKARQET
QKGFREEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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