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Report for CCDS89551.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89551.1 Public Mus musculus 2 Tmem127 23 108 98 CCDS HistoryNCBI Gene:69470Re-query CCDS DB by CCDS ID:89551.1Re-query CCDS DB by GeneID:69470See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89551.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000174288.1 ENSMUSP00000134629.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000174288.1Link to Ensembl Protein Viewer:ENSMUSP00000134629.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000174288Re-query CCDS DB by Protein ID:ENSMUSP00000134629
Original member Current member NCBI NM_001362704.1 NP_001349633.1 Accepted alive Link to Nucleotide Sequence:NM_001362704.1Link to Protein Sequence:NP_001349633.1Re-query CCDS DB by Nucleotide ID:NM_001362704Re-query CCDS DB by Protein ID:NP_001349633Link to BLAST:NP_001349633.1

Chromosomal Locations for CCDS 89551.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 127256013 127256169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127256957 127257264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGAACCCCCAGACAGTGCTGCTCCTGAGGGTCATCGCTGCTTTCTGCTTCCTGGGCATCCTGTGTAGTC
TCTCTGCATTCCTTTTGGATGTCTTTGGGCCCAAGCATCCAGCTCTGAAGATTACTCGTCGGTATGCCTT
TGCTCACATCCTCACTGTCCTACAGTGTGCTACCGTCATTGGCTTTTCCTATTGGGCTTCTGAGCTCATC
CTGGCCCAGCAGCAACAGCATAAGAAGTACCACGGCTCCCAAGTCTATGTCACCTTTGCTGTTAGCTTCT
ACTTGGTGGCAGGAGCTGGTGGAGCCTCAATCCTGGCTACTGCAGCCAACCTCCTGCGCCACTACCCAAC
AGAGGAAGAAGAACAAGCACTGGAGCTACTATCTGAGATGGAGGAGAATGACCCCTACCCAGCAGAGTAT
GAGGTCATCAACCAATTCCAGCCACCCCCTGCCTATACACCCTAA

Translation (154 aa):
MNPQTVLLLRVIAAFCFLGILCSLSAFLLDVFGPKHPALKITRRYAFAHILTVLQCATVIGFSYWASELI
LAQQQQHKKYHGSQVYVTFAVSFYLVAGAGGASILATAANLLRHYPTEEEEQALELLSEMEENDPYPAEY
EVINQFQPPPAYTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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