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Report for CCDS79868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79868.1 Public Mus musculus 2 Ube2v1 23 108 98 CCDS HistoryNCBI Gene:66589Re-query CCDS DB by CCDS ID:79868.1Re-query CCDS DB by GeneID:66589See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79868.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000151365.7 ENSMUSP00000114764.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000151365.7Link to Ensembl Protein Viewer:ENSMUSP00000114764.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000151365Re-query CCDS DB by Protein ID:ENSMUSP00000114764
Original member Current member NCBI NM_001311131.1 NP_001298060.1 Accepted alive Link to Nucleotide Sequence:NM_001311131.1Link to Protein Sequence:NP_001298060.1Re-query CCDS DB by Nucleotide ID:NM_001311131Re-query CCDS DB by Protein ID:NP_001298060Link to BLAST:NP_001298060.1

Chromosomal Locations for CCDS 79868.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 167609101 167609247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 167610304 167610429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 167617829 167617977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 167629170 167629269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (522 nt):
ATGAGCCCACTACAGCCACTCAAGATGTCTACAATTGAAGGGACGTCTCTCCTGTGTGTCCAGGACTGCA
GG
ATGTCAGACAGTGGCCCTTGGCTGCCAGGAGTAAAAGTCCCTCGAAATTTCCGACTGTTGGAAGAGCT
G
GAAGAAGGACAGAAAGGAGTAGGCGACGGCACAGTTAGCTGGGGTCTGGAGGACGACGAGGACATGACA
CTT
ACAAGATGGACAGGCATGATAATTGGACCTCCACGAACAATCTATGAAAACCGAATATACAGCCTTA
AG
ATAGAGTGTGGGCCTAAGTACCCAGAGGCACCCCCGTCTGTAAGATTCGTAACAAGAGTCAATATGAG
C
GGCGTGAGCAGTTCGAATGGAGTGGTGGATCCGAGAGCCACGGCAGTGCTGGCAAAGTGGCAGAACTCC
CAC
AGCATCAAAGTCATCCTGCAGGAACTGCGGCGCCTGATGATGTCAAAAGAGAACATGAAGCTGCCAC
AG
CCGCCGGAAGGACAGTGTTACAGCAATTAG


Translation (173 aa):
MSPLQPLKMSTIEGTSLLCVQDCRMSDSGPWLPGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMT
L
TRWTGMIIGPPR
TIYENRIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSSNGVVDPRATAVLAKWQNS
H
SIKVILQELRRLMMSKENMKLPQPPEGQCYSN




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser