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Report for CCDS70428.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70428.1 Public Mus musculus 13 Adarb2 23 108 98 CCDS HistoryNCBI Gene:94191Re-query CCDS DB by CCDS ID:70428.1Re-query CCDS DB by GeneID:94191See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70428.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000123187.1 ENSMUSP00000120757.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000123187.1Link to Ensembl Protein Viewer:ENSMUSP00000120757.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000123187Re-query CCDS DB by Protein ID:ENSMUSP00000120757
Original member Current member NCBI NM_001289530.1 NP_001276459.1 Accepted alive Link to Nucleotide Sequence:NM_001289530.1Link to Protein Sequence:NP_001276459.1Re-query CCDS DB by Nucleotide ID:NM_001289530Re-query CCDS DB by Protein ID:NP_001276459Link to BLAST:NP_001276459.1

Chromosomal Locations for CCDS 70428.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 8203221 8203320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8559104 8559190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8569667 8570574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8672405 8672519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8697620 8697788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8701580 8701731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8713600 8713768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8731790 8731971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8752573 8752746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8757226 8757275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2106 nt):
ATGGCATCTGTCCTGGGGAGTGGCAGAGGGTCTGGAGGGCTAAGCAGTCAACTCAAATGCAAGTCCAAGA
GGAGGAGGAGGAGGAGGTCCAAGAGGAAAGACAAAGTCAGCATACTGTCAACCTTCCTTGCTCCTTTCAA
GTACCTAAGTCCTGGCACCACAAACACAGAGGATGAAGATAACCTAAGTACCAGCAGTGCTGAAGTGAAG
GAAAACCGAAATGTGAGCAACCTGGGGACCAGGCCCCTGCCCCCTGGAGACTGGGCCAGAGGCAGCACAC
CCAGCGTTAAAAGGAAAAGGCCGCTGGAGGAAGGAAATGGGGGACATTTCTGCAAACTCCAGCTGATCTG
GAAGAAGCTCTCCTGGTCTGTGACACCCAAGAATGCGCTGGTCCAGCTGCATGAGCTGAAGCCTGGTCTG
CAGTACCGAATGGTGTCACAGACGGGCCCGGTGCACGCCCCAGTTTTCGCAGTGGCTGTAGAAGTGAACG
GCCTCACATTTGAAGGCACGGGGCCCACTAAGAAGAAGGCCAAGATGCGGGCAGCAGAAATGGCCCTGAA
GTCCTTTGTGCAGTTCCCCAATGCCTTCCAGGCCCACCTGGCCATGGGCAGTAGTACCAGCCCGTGCACT
GACTTCACCTCTGACCAGGCTGACTTCCCAGACACGTTGTTCAAGGAGTTTGAACCATCCTCAAAAAACG
AAGACTTCCCAGGCTGTCATCCCGTTGATACTGAGTTTCTGTCCTCTGCCTATCGGCGAGGACGGCTACT
CTACCACACCCTGGACCTCATGGGCCAGGCTCTGCCTGACAGGTCCAGGCTGGCTCCGGGAGCCTTGGGT
GAGAGGAACCCTGTAGTGGTACTGAATGAGTTACGCTCAGGTCTTCGGTATGTGTGCCTCTCCGAGACAG
CCGAGAAGCCCCGAGTCAAGAGCTTTGTCATGGCTGTGTGCGTGGATGGGAGGACGTTCGAAGGCTCTGG
ACGCAGCAAGAAGCTGGCCAAGGGCCAAGCAGCACAAGCTGCCTTGCAGGCCCTCTTCGATATCCGGCTG
CCTGGTCACATACCCAGCAGGAGTAAAAGCAACCTCTTGCCACAGGATTTTGCAGACTCTGTGTCCCAGC
TGGTCACACAGAAGTTCCGTGAACTGACAGTCGGCCTGACATCTGTGTATGCCCGCCACAAAACACTGGC
AGGAATCGTCATGACCAAAGGCTTGGACACCAAACAAGCGCAGGTCATCGTTCTGTCCTCTGGGACCAAG
TGTATCAGCGGTGAGCACATCAGTGACCAGGGGCTGGTTGTCAACGACTGTCATGCTGAGATCGTGGCGA
GGCGGGCATTTCTTCACTTCCTCTACTCTCAGCTGGAGCTGCACTTGAGCAAGCATCAAGAGGACCCCGA
GAGATCAATATTCATACGTTTAAAGGAAGGAGGTTACAGGCTGCGAGAAAACATCCTCTTCCATCTCTAC
GTGAGCACATCCCCCTGTGGAGATGCCAGAGTCAACTCTCCATATGAAATCACCACAGACTTGAACAGCA
GCAAACACATCGTCAGGAAGTTCCGAGGGCACCTGCGCACCAAGATTGAGTCTGGGGAAGGAACAGTCCC
TGTGCGGGGCCCCAGTGCAGTCCAGACGTGGGATGGCATCCTATTGGGGGAGCAGCTAATCACCATGTCC
TGCACAGACAAGATTGCCAGCTGGAATGTGCTGGGACTACAAGGCGCTCTCCTCTGTCACTTCATCGAGC
CTGTGTACCTCCACAGCATCATTGTGGGCAGCCTGCACCACACGGGCCATCTTGCACGGGTCATGAGCCA
CAGGATGGAGGGAATCGGCCAGCTGCCTGCCTCATACCGACAAAACAGGCCTCTCCTTAGTGGCGTGAGT
CACGCAGAGGCCCGGCAGCCAGGAAAGTCTCCCCACTTCAGTGCCAACTGGGTCGTGGGCAGCGCCGACC
TGGAGATCATTAATGCCACCACTGGGAAGAGGAGCTGTGGGGGCTCATCCCGGCTCTGCAAACACGTGTT
TTCTGCTTGGTGGGCACGGCTGCATGCTAAGCACACGGATCCCCAGCCATGGAGACACACCATCCATGTA
CTGTGA

Translation (701 aa):
MASVLGSGRGSGGLSSQLKCKSKRRRRRRSKRKDKVSILSTFLAPFKYLSPGTTNTEDEDNLSTSSAEVK
ENRNVSNLGTRPLPPGDWARGSTPSVKRKRPLEEGNGGHFCKLQLIWKKLSWSVTPKNALVQLHELKPGL
QYRMVSQTGPVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAEMALKSFVQFPNAFQAHLAMGSSTSPCT
DFTSDQADFPDTLFKEFEPSSKNEDFPGCHPVDTEFLSSAYRRGRLLYHTLDLMGQALPDRSRLAPGALG
ERNPVVVLNELRSGLRYVCLSETAEKPRVKSFVMAVCVDGRTFEGSGRSKKLAKGQAAQAALQALFDIRL
PGHIPSRSKSNLLPQDFADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTK
CISGEHISDQGLVVNDCHAEIVARRAFLHFLYSQLELHLSKHQEDPERSIFIRLKEGGYRLRENILFHLY
VSTSPCGDARVNSPYEITTDLNSSKHIVRKFRGHLRTKIESGEGTVPVRGPSAVQTWDGILLGEQLITMS
CTDKIASWNVLGLQGALLCHFIEPVYLHSIIVGSLHHTGHLARVMSHRMEGIGQLPASYRQNRPLLSGVS
HAEARQPGKSPHFSANWVVGSADLEIINATTGKRSCGGSSRLCKHVFSAWWARLHAKHTDPQPWRHTIHV
L


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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