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Report for CCDS51852.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51852.1 Public Mus musculus 6 Grip2 23 108 98 CCDS HistoryNCBI Gene:243547Re-query CCDS DB by CCDS ID:51852.1Re-query CCDS DB by GeneID:243547See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51852.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000162300.7 ENSMUSP00000124709.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162300.7Link to Ensembl Protein Viewer:ENSMUSP00000124709.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000162300Re-query CCDS DB by Protein ID:ENSMUSP00000124709
Original member NCBI NM_001159507.1 NP_001152979.1 Updated not alive Link to Nucleotide Sequence:NM_001159507.1Link to Protein Sequence:NP_001152979.1Re-query CCDS DB by Nucleotide ID:NM_001159507Re-query CCDS DB by Protein ID:NP_001152979
Current member NCBI NM_001159507.2 NP_001152979.1 Accepted alive Link to Nucleotide Sequence:NM_001159507.2Link to Protein Sequence:NP_001152979.1Re-query CCDS DB by Nucleotide ID:NM_001159507Re-query CCDS DB by Protein ID:NP_001152979Link to BLAST:NP_001152979.1

Chromosomal Locations for CCDS 51852.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 91763448 91763606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91764696 91764842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91765248 91765391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91772633 91772738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91773793 91773961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91774682 91774861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91775345 91775484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91777365 91777509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91778599 91778744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91778835 91778901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91779135 91779215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91779824 91779969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91780331 91780517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91782316 91782459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91782783 91782905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91783570 91783739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91783824 91783971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91784685 91784830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91785681 91785756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91786467 91786553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91787184 91787329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91788008 91788143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91788364 91788444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 91807264 91807318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3129 nt):
ATGTTGGCGGTGTCACTCAAGTGGCGGCTGGGCGTGGTGAGGCGGAGGCCCAAAGATGATGGGCCTTACT
CAAAAGGGGGGAAGGACACAGCGGGGGCCGACGGGGCTCTGGTATGCCGCCGCCAGAGCATTCCAGAGGA
GTTCCGGGGCATCACCATGGTGGAGTTGATCAAACGTGAGGGCAGCACTCTGGGCCTGACCATCTCCGGA
GGGACTGACAAGGACGGGAAGCCCAGAGTCTCCAACCTGAGACCTGGGGGCCTGGCAGCCAGGAGTGATC
TACTGAATGTGGGCGACTACATCCGCTCAGTGAACGGGATCCATCTGACCCGCCTCCGACATGACGAGAT
CATCACACTGCTGAAGAATGTGGGCGAGCGCGTGGTGCTGGAGGTGGAGTATGAGCTGCCCCCGCCCGCT
CCCGAAAACAACCCAAGGATCATTTCCAAGACGGTGGACGTCTCCCTCTACAAGGAAGGCAACAGCTTTG
GCTTTGTCCTCAGAGGAGGTGCCCATGAGGACCTGCACAAATCCCGCCCATTGGTCCTGACTTACGTGAG
ACCTGGTGGCCCAGCGGACAGGGAGGGGTCCTTAAAGGTGGGCGACAGGCTGCTCAGCATAGATGGGATC
CCACTGCATGGGGCCAGCCATGCTACTGCAATAGCCACCCTGCAACAGTGTAGCCATGAGGCCCTTTTCC
AAGTGGAGTATGATGTGGCCACCCCAGACACAGTGGCCAATGCTTCAGGCCCTTTGGTGGTAGAAATAGC
CAAGACCCCAGGATCTGCCCTGGGGATCTCTCTCACCACTGGCTCCCACCGGAACAAGCCAGCTATCACT
ATCGACCGTATCAAGCCAGCTAGCGTGGTGGACAGGAGTGGTGCGCTGCATGCTGGAGACCACATCCTCG
CCATCGATGGCACCAGCACAGAACACTGCTCACTGGTCGAGGCTACTAAGCTCCTGGCCAGTGTTACTGA
GAAAGTTCGACTGGAGATCTTGCCTTCGCCCCAGAGTCGTCGGCCCCTGAAGCCCCCAGAGGCAGTGAGA
ATACAGAGGAGTGAGCAGCTGCACCGCTGGGACCCCTCTGCCCCTTCTTGCCACAGCCCAAGGCCAAGCC
ACTGCAGGGCACCCACCTGGGCAGCTGGAGGCCCGGACCAGAGCCGATCTGTGTCCTCGACTCCCTTCTC
CTCACCGACTATGAACCCCGCCTTTCCCTGTGCCAACGCCAGCACCCTGCCCAGAGGACCCATGAGCCCC
AGGACAACAGCAGGGAGGAGAAGGCAGCGAAGGAAAGAACACAGGAGCTCTTTGTCACTGGCCTCCAGCA
CGGTAGGGCCCGGCGGGCAGATTGTTCATACGGAGACCACGGAAGTTGTGCTCTGTGGAGATCCTCTCAG
TGGCTTCGGCCTTCAGCTGCAAGGAGGCATCTTTGCCACCGAGACCCTGTCCTCCCCACCCTTGGTGCGA
TTTATTGAACCTGACAGCCCCGCTGAGAGGTGTGGTCTGCTGCAGGTGGGGGACCGAGTCCTAGCCATCA
ATGGCATTGCCACTGAGGATGGGACCATGGAGGAAGCCAACCAGCTGTTGCGGGATGCTGCGCTGGCCCG
CAAAGTTGTTTTGGAGATCGAGTTTGATGTGGCAGAGTCTGTCATCCCAAGCAGTGGAACCTTCCACGTG
AAGTTACCCAAAAGACGCGGTGTGGAGCTGGGCATCACCATTAGCTCGGCCAGCAGAAAGCGAGGGGAAC
CCCTGATCATCTCCGACATCAAGAAAGGCAGCGTGGCGCACAGGACTGGCACCCTCGAGCCAGGCGACAA
GCTGCTGGCCATTGACAATATCCGCCTGGACCACTGTCCCATGGAGGATGCCGTGCAGATCCTGCGTCAA
TGTGAGGACCTGGTGAAGCTGAAGATCCGGAAAGATGAGGACAACTCAGATGAGCAGGAGAGCTCTGGCG
CAGTCAGCTACACAGTGGAACTGAAGCGCTATGGCGGACCACTGGGCATCACCATCTCTGGTACAGAGGA
ACCTTTTGACCCCATCATTATCTCTGGCCTCACCAAGCGGGGTCTAGCCGAAAGGACTGGTGCCATCCAT
GTCGGGGACCGGATACTGGCCATCAACAGCGTGAGCCTCAAGGGCCGGCCCCTGAGTGAGGCCATCCACC
TTCTGCAGGTGGCCGGGGAGACGGTCACACTGAAGATCAAGAAGCAGCTAGACCGTCCCCTCCTCCCCCG
CCAGTCAGGCAGCCTCAGTGAGGCCAGTGATGTGGATGAGGACCCCCCTGAGGCCCTCAAGGGAGGCTTG
CTGGCAACGCGCTTCTCACCTGCTGTACCCAGCGTGGACAGTGCTGTGGAGTCCTGGGGCAGCTCTGCCA
CAGATGGTGGCTTTGGGGGCACAGGCTCCTACACTCCGCAGGTGGCAGTCCGGAGTGTGACTCCCCAGGA
GTGGCGTCCTAGCAGACTGAAGAGTAGCCCCCCACCCCTTGAGCCCCGGAGGACGAGCTACACACCGGGT
CCCTCTGACGAAAGCTTCCCAGAGGAAGAGGGGGACTGGGAGCCACCAATGAGCCCAGCCCCCGGCCCCG
CCCGAGAGGAGGGTTTCTGGAGAGTGCTTGGAGAGGCTCTTGAAGACCTGGAGTCCTGTGGTCAGTCTGA
ACTGCTAAGGGAGCTGGAGGCTTCCATCATGACAGGCACTGTACACTCCGTGGCTGTGGATGGCAGGCCT
GGCTCTCGACCCTGGCGCCGGAGCCGGGAGGTCCGAACATCCCCTGAAGACCTGCAGGAGCTGCTGCTGC
CGACACCCCTGGAGATGCACAGGGTGACCCTGCACAAAGACCCGGTGAGGAACGACTTTGGTTTCAGCGT
CTCAGATGGCCTCCTGGAGAAGGGTGTCTATGTCCACACTGTGCGCATTGACGGACCAGCTCAGCTTGGA
GGCCTGCAGCCCTTTGACCGTCTCCTGCAGGTCAACCATGTTCGCACTCGGGACTTTGACTGCTGTCTGG
CGGTACCACTCCTGGCGGAGGCTGGGGACATCCTGGAGCTGGTGGTCAGCCGTAACCCACTGGCACAGAG
CCGCAGGACACCAGGAGCACCAGGCCCCAGTAGTCCCCAGATGCTCTGA

Translation (1042 aa):
MLAVSLKWRLGVVRRRPKDDGPYSKGGKDTAGADGALVCRRQSIPEEFRGITMVELIKREGSTLGLTISG
GTDKDGKPRVSNLRPGGLAARSDLLNVGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVLEVEYELPPPA
PENNPRIISKTVDVSLYKEGNSFGFVLRGGAHEDLHKSRPLVLTYVRPGGPADREGSLKVGDRLLSIDGI
PLHGASHATAIATLQQCSHEALFQVEYDVATPDTVANASGPLVVEIAKTPGSALGISLTTGSHRNKPAIT
IDRIKPASVVDRSGALHAGDHILAIDGTSTEHCSLVEATKLLASVTEKVRLEILPSPQSRRPLKPPEAVR
IQRSEQLHRWDPSAPSCHSPRPSHCRAPTWAAGGPDQSRSVSSTPFSSPTMNPAFPCANASTLPRGPMSP
RTTAGRRRQRRKEHRSSLSLASSTVGPGGQIVHTETTEVVLCGDPLSGFGLQLQGGIFATETLSSPPLVR
FIEPDSPAERCGLLQVGDRVLAINGIATEDGTMEEANQLLRDAALARKVVLEIEFDVAESVIPSSGTFHV
KLPKRRGVELGITISSASRKRGEPLIISDIKKGSVAHRTGTLEPGDKLLAIDNIRLDHCPMEDAVQILRQ
CEDLVKLKIRKDEDNSDEQESSGAVSYTVELKRYGGPLGITISGTEEPFDPIIISGLTKRGLAERTGAIH
VGDRILAINSVSLKGRPLSEAIHLLQVAGETVTLKIKKQLDRPLLPRQSGSLSEASDVDEDPPEALKGGL
LATRFSPAVPSVDSAVESWGSSATDGGFGGTGSYTPQVAVRSVTPQEWRPSRLKSSPPPLEPRRTSYTPG
PSDESFPEEEGDWEPPMSPAPGPAREEGFWRVLGEALEDLESCGQSELLRELEASIMTGTVHSVAVDGRP
GSRPWRRSREVRTSPEDLQELLLPTPLEMHRVTLHKDPVRNDFGFSVSDGLLEKGVYVHTVRIDGPAQLG
GLQPFDRLLQVNHVRTRDFDCCLAVPLLAEAGDILELVVSRNPLAQSRRTPGAPGPSSPQML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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