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Report for CCDS51131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51131.1 Public Mus musculus 4 Klhl32 23 108 98 CCDS HistoryNCBI Gene:212390Re-query CCDS DB by CCDS ID:51131.1Re-query CCDS DB by GeneID:212390See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51131.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108218.9 ENSMUSP00000103853.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108218.9Link to Ensembl Protein Viewer:ENSMUSP00000103853.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000108218Re-query CCDS DB by Protein ID:ENSMUSP00000103853
Original member Current member NCBI NM_001163020.2 NP_001156492.1 Accepted alive Link to Nucleotide Sequence:NM_001163020.2Link to Protein Sequence:NP_001156492.1Re-query CCDS DB by Nucleotide ID:NM_001163020Re-query CCDS DB by Protein ID:NP_001156492Link to BLAST:NP_001156492.1

Chromosomal Locations for CCDS 51131.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 24617385 24617546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24626897 24626991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24629160 24629352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24632643 24632701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24649540 24650266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24682055 24682270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24708953 24709051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24743858 24743965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24792617 24792797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 24800806 24800828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1863 nt):
ATGCCGTCTGAACACTGCCTCAGTATTCAAGAAATGCTGACGGGCCAGAGGCTGTGCCACTCGGAAACTC
ACAATGACACGGTCCTGGCGGCGCTGAATCAGCAAAGAAGTGATGGCATTCTCTGCGACGTGACCCTGAT
CGCCGAGGAACAGAAATTCCACGCTCACAAGGCGGTCCTAGCAGCCTGCAGTGACTACTTCCGGGCAATG
TTCAGTCTTTGTATGGTGGAAAGTGGAGCCGATGAAGTAAATTTACGTGGTGTGACCAGCCTGGGCTTAA
AGCAGGCTCTGGAGTTCGCATATACAGGACAGATTTTGTTGGAGCCAGGAGTGATCCAGGATGTGTTAGC
AGCTGGCAGTCACCTACAGCTGTTGGAACTTCTCAATCTGTGCTCCCACTATCTCATCCAGGAACTAAAT
AGCTTTAATTACTTGGATCTGTACAGACTTGCTGACCTCTTTCACCTCACTTTGTTGGAGAAGGCAGTGA
TTGACTTCCTAGTGAAGCATCTCTCGGAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACGCTGCCCTA
CTGCCTGCTTCAGGAGGTGCTGAAGAGTGACCGCCTGACGTCCCTGAGTGAGGAGCAGATCTGGCAGCTA
GCTGTGAGGTGGCTGGAACACAATTGCCATTACCAGCATCTGGACGAGCTCCTGCAGTACATCCGCTTTG
GCCTAATGGATGTGGATACACTCCACACGGTTGCCCTATCCCACCCCCTGGTGCAGGCAAGTGAGACGGC
AACTGCCCTTGTCAACGAGGCCCTGGAATACCACCAAAGCATCTATGCACAGCCTGTGTGGCAGACCCGC
CGGACAAAACCGCGATTCCAGTCCGATACTCTCTATATTATTGGTGGGAAGAAGCGTGAGGTCTGCAAAG
TCAAGGAACTTCGTTACTTCAATCCTGTGGACCAGGAGAATGCCCTCATAGCCGCCATTGCCAACTGGAG
TGAGCTGGCTCCCATGCCGGTGGGAAGGAGCCATCACTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTA
GCAGGAGGAGAAGTGGAACATGCCAGTGGCCGGACATGTGCCGTGAGGACAGCCTGTCGCTATGACCCCC
GCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAACATTTTGTGCTGGGTGCCATGGA
TGAATACCTCTATGCAGTAGGGGGCAGAAATGAACTGTGCCAAGTTCTACCTACAGTTGAACGATACTGC
CCCAAGAAGAACAAATGGACTTTTGTGCAGTCCTTTGACAGATCCCTCTCGTGTCACGCTGGATATGTGG
CTGATGGTCTTCTTTGGATATCAGGTGGGGTGACAAACACCGCACAGTATCAGAACAGACTGATGGTATA
TGAACCTAACCAGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGAGAAGAGTCTACCACTCCATGGCT
GCTGTCCAAAGGAAGCTTTATGTGCTTGGAGGCAATGACCTGGATTACAATAATGACCGGATTCTCGTGC
GTCATATAGATTCTTACAACATTGACACTGATCAGTGGACGCGCTGTAATTTCAACTTGTTGACTGGCCA
GAATGAATCTGGAGTCGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACAAAT
GAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCTACGGACCTA
CACTGCCCTTTGCTTCCAACGGCATAGCGGCGTGCTTCCTTCCGGCTCCGTATTTCACATGCCCCAACCT
GCAGACTCTGCAAGTGCCTCACCACAGGATCGGCACTGTCTGA

Translation (620 aa):
MPSEHCLSIQEMLTGQRLCHSETHNDTVLAALNQQRSDGILCDVTLIAEEQKFHAHKAVLAACSDYFRAM
FSLCMVESGADEVNLRGVTSLGLKQALEFAYTGQILLEPGVIQDVLAAGSHLQLLELLNLCSHYLIQELN
SFNYLDLYRLADLFHLTLLEKAVIDFLVKHLSELLKSRPEDVLTLPYCLLQEVLKSDRLTSLSEEQIWQL
AVRWLEHNCHYQHLDELLQYIRFGLMDVDTLHTVALSHPLVQASETATALVNEALEYHQSIYAQPVWQTR
RTKPRFQSDTLYIIGGKKREVCKVKELRYFNPVDQENALIAAIANWSELAPMPVGRSHHCVAVMGDFLFV
AGGEVEHASGRTCAVRTACRYDPRSNSWAEIAPMKNCREHFVLGAMDEYLYAVGGRNELCQVLPTVERYC
PKKNKWTFVQSFDRSLSCHAGYVADGLLWISGGVTNTAQYQNRLMVYEPNQNKWISRSPMLQRRVYHSMA
AVQRKLYVLGGNDLDYNNDRILVRHIDSYNIDTDQWTRCNFNLLTGQNESGVAVHNGRIYLVGGYSIWTN
EPLACIQVLDVSREGKEEVFYGPTLPFASNGIAACFLPAPYFTCPNLQTLQVPHHRIGTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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