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Report for CCDS50130.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50130.1 Public Mus musculus 17 Mrps10 23 108 98 CCDS HistoryNCBI Gene:64657Re-query CCDS DB by CCDS ID:50130.1Re-query CCDS DB by GeneID:64657See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50130.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120737.7 ENSMUSP00000113460.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120737.7Link to Ensembl Protein Viewer:ENSMUSP00000113460.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120737Re-query CCDS DB by Protein ID:ENSMUSP00000113460
Original member Current member NCBI NM_001146211.1 NP_001139683.1 Accepted alive Link to Nucleotide Sequence:NM_001146211.1Link to Protein Sequence:NP_001139683.1Re-query CCDS DB by Nucleotide ID:NM_001146211Re-query CCDS DB by Protein ID:NP_001139683Link to BLAST:NP_001139683.1

Chromosomal Locations for CCDS 50130.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 47368907 47368954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47372427 47372491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47372576 47372645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47374973 47375109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47375934 47376042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47377760 47377849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47378202 47378285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (603 nt):
ATGGCGGCGCGCGCAGCGTGTGTGGCTCTGTGCCGGCGCCTGCAGCAGGAATTGGGGAATTCCTCTATAA
ATGGTTCTAAGAGCAGGACAACCAGAGCTGGTGGCCTCGCGCTTGCCAGTATGAAGTGGGTGCCACTGTC
AAACCTGCATGTGGACGTCCCAAAGGATGTGACCAGACCTACGATAACCACTTCCGATGAGCCAGACACG
TTGTACAAACGCCTGTCCATCTTAGTGAAAGCCCATGACAGGGCTGTGTTAGACAGCTATGAGTACTTTG
CTGTGCTCGCTGCTAAAGAACTTGGCATTTCTATTAAAGTACACGAGCCGCCAAGGAAAATAGAGCGCTT
CACTCTTCTCAAGTCGGTGCACATCTTCAAGAAACACAGAGTCCAGTATGAGATGAGGACACTCTACAGA
TGTTTGGAGTTAAAACATTTGACTGGAAGCACAGCCAGTGTCTACCTGGAGTATATCCAGCGAAACTTGC
CTGAAGGGGTGGCCATGGAAGTGACAAAGACGCAGATACAGCAGTTGCCAGAACACATCAAGGAACCGAT
GTGGGAAACAGTTCCCGAGGAGAAGGAAGAAAGCAAGTCGTAA

Translation (200 aa):
MAARAACVALCRRLQQELGNSSINGSKSRTTRAGGLALASMKWVPLSNLHVDVPKDVTRPTITTSDEPDT
LYKRLSILVKAHDRAVLDSYEYFAVLAAKELGISIKVHEPPRKIERFTLLKSVHIFKKHRVQYEMRTLYR
CLELKHLTGSTASVYLEYIQRNLPEGVAMEVTKTQIQQLPEHIKEPMWETVPEEKEESKS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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