NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS49483.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49483.1 Public Mus musculus 14 Gm5622 23 108 98 CCDS HistoryNCBI Gene:434459Re-query CCDS DB by CCDS ID:49483.1Re-query CCDS DB by GeneID:434459See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 49483.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096170.4 ENSMUSP00000093884.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096170.4Link to Ensembl Protein Viewer:ENSMUSP00000093884.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000096170Re-query CCDS DB by Protein ID:ENSMUSP00000093884
Original member Current member NCBI NM_001013816.1 NP_001013838.1 Accepted alive Link to Nucleotide Sequence:NM_001013816.1Link to Protein Sequence:NP_001013838.1Re-query CCDS DB by Nucleotide ID:NM_001013816Re-query CCDS DB by Protein ID:NP_001013838Link to BLAST:NP_001013838.1

Chromosomal Locations for CCDS 49483.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 51553108 51553129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51654788 51654919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51655772 51655934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51657703 51657883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51662189 51662194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (504 nt):
ATGGAGAGCCATGAGAATCCAGGCATGTTTTCCCGGCTGCTCAGGTTATTTCACAGGGAGAATGGCGATC
AAGGAGAGACCAGACCAAGGCAGAAGGAATTTGGCATCCTTTCTTATGAAAAAGGAAGAATGAAATCATT
CTGGGGAAGACACGTGTCTGCTGGGAAAACATCATCCCAAAGTTGCAACATCACTAATCATATGAAGAAT
ATGAATAAACTAGAAGATATGAAATTTTATATCAGGAAGATAAATGCTGAGCGGGAAGAACTTTTTCGAA
TCTTGGACATTGACATGAATACTGATTTGAACTACAGCATCAGGCACACCCACCTCCTGAAAAAATGCAA
TCAATTGAAGAAAAAAGTAAGGATGTTGCTGAATGAGAACAGAAAGCTGCTGGTAGAGCAGGCTGACCAG
GAGGCATCCTTTGGTGAAGAAAAGAGTTCTGTGATGAGACCAGCAAGAACATACATCCCAAGTGCAAAGC
AGCAGCAGGTGTGA

Translation (167 aa):
MESHENPGMFSRLLRLFHRENGDQGETRPRQKEFGILSYEKGRMKSFWGRHVSAGKTSSQSCNITNHMKN
MNKLEDMKFYIRKINAEREELFRILDIDMNTDLNYSIRHTHLLKKCNQLKKKVRMLLNENRKLLVEQADQ
EASFGEEKSSVMRPARTYIPSAKQQQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH