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Report for CCDS48728.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48728.1 Public Mus musculus 10 Myl6 23 108 98 CCDS HistoryNCBI Gene:17904Re-query CCDS DB by CCDS ID:48728.1Re-query CCDS DB by GeneID:17904See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48728.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000164181.1 ENSMUSP00000128803.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164181.1Link to Ensembl Protein Viewer:ENSMUSP00000128803.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164181Re-query CCDS DB by Protein ID:ENSMUSP00000128803
Original member Current member NCBI NM_010860.4 NP_034990.1 Accepted alive Link to Nucleotide Sequence:NM_010860.4Link to Protein Sequence:NP_034990.1Re-query CCDS DB by Nucleotide ID:NM_010860Re-query CCDS DB by Protein ID:NP_034990Link to BLAST:NP_034990.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034990.1 151 Q60605-2 151 100% 0 0

Chromosomal Locations for CCDS 48728.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128491005 128491033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128492059 128492136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128492229 128492402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128492602 128492745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128493539 128493566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128493809 128493811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGTGTGACTTCACCGAGGACCAGACCGCAGAATTCAAGGAGGCTTTCCAGCTGTTTGACCGAACAGGTG
AT
GGCAAGATCCTGTACAGCCAGTGTGGGGATGTGATGCGGGCCCTGGGCCAGAACCCTACCAACGCCGA
G
GTGCTCAAGGTCCTAGGGAACCCCAAGAGTGATGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTC
CTG
CCCATGCTGCAGACCGTGGCCAAGAACAAGGACCAGGGAACCTACGAGGATTATGTTGAAGGCCTTC
GT
GTGTTTGACAAGGAAGGAAATGGCACCGTCATGGGTGCTGAAATCCGTCATGTCCTAGTCACACTGGG
C
GAGAAGATGACAGAGGAAGAAGTAGAGATGCTAGTGGCGGGGCATGAGGACAGCAATGGTTGCATCAAC
TAT
GAAGAGCTTGTCCGGATGGTGCTGAATGGCTGA


Translation (151 aa):
MCDFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFEHF
L
PMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTL
GEKMTEEEVEMLVAGHEDSNGCIN
Y
E
ELVRMVLNG



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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