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Report for CCDS37313.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37313.1 Public Mus musculus 16 Tnk2 23 108 98 CCDS HistoryNCBI Gene:51789Re-query CCDS DB by CCDS ID:37313.1Re-query CCDS DB by GeneID:51789See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37313.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115124.8 ENSMUSP00000110777.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115124.8Link to Ensembl Protein Viewer:ENSMUSP00000110777.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115124Re-query CCDS DB by Protein ID:ENSMUSP00000110777
Original member Current member NCBI NM_016788.3 NP_058068.2 Accepted alive Link to Nucleotide Sequence:NM_016788.3Link to Protein Sequence:NP_058068.2Re-query CCDS DB by Nucleotide ID:NM_016788Re-query CCDS DB by Protein ID:NP_058068Link to BLAST:NP_058068.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058068.2 1055 O54967-1 1055 99.8104% 0 2

Chromosomal Locations for CCDS 37313.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 32663757 32663919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32665886 32665956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32668221 32668442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32669387 32669539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32669953 32670230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32670792 32670918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32671295 32671441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32671539 32671633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32675522 32675716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32677894 32677985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32678669 32678713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32679459 32680807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32680900 32680995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32681152 32681279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32682685 32682691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3168 nt):
ATGCAGCCGGAGGAGGGAACGGGCTGGCTGTTGGAGCTGCTGTCCGAGGTGCAGCTACAACAGTATTTCC
TG
AGGCTTCGAGATGACCTCAACATTACCCGCCTATCTCATTTTGAATATGTCAAAAATGAAGACCTGGA
A
AAGATTGGCATGGGCCGGCCTGGCCAGAGGCGGCTGTGGGAGGCCGTGAAGAGGAGGAAGGCCATGTGC
AAA
CGCAAGTCATGGATGAGCAAGGTGTTCAGTGGAAAGCGGTTGGAGGCCGAGTTCCCTTCCCAGCACT
CT
CAGAGCACCTTCCGGAAGCCCTCCCCCACCCCAGGGAGCCTGCCAGGGGAGGGGACCCTGCAGAGCCT
C
ACCTGCCTCATTGGGGAGAAAGACCTACGCCTGCTGGAGAAGCTGGGGGATGGCTCCTTTGGCGTGGTG
CGC
AGGGGTGAATGGGACGCCCCCGCAGGGAAGACGGTGAGTGTGGCCGTCAAGTGCCTGAAGCCTGACG
TG
CTGAGCCAGCCAGAGGCCATGGACGACTTCATCCGGGAGGTCAATGCCATGCATTCACTAGACCACCG
A
AACCTCATTCGCTTGTATGGTGTGGTGCTCACACTACCCATGAAGATGGTGACAGAGCTGGCACCTCTG
GGA
TCTTTGTTGGACCGCCTACGTAAACACCAAGGTCATTTCCTCTTGGGGACGCTGAGTCGCTACGCTG
TG
CAGGTGGCTGAGGGTATGGCCTACCTGGAGTCCAAGCGCTTCATTCACCGGGATCTGGCTGCTCGAAA
C
CTGCTTTTGGCTACCCGGGACCTGGTCAAGATTGGGGACTTCGGACTGATGCGAGCTCTGCCCCAGAAT
GAT
GACCACTATGTCATGCAAGAACACCGCAAGGTGCCCTTTGCCTGGTGTGCCCCTGAGAGCCTGAAGA
CA
CGGACTTTCTCCCATGCCAGTGACACCTGGATGTTTGGGGTCACACTGTGGGAGATGTTCACCTATGG
C
CAGGAGCCCTGGATTGGCCTCAATGGCAGCCAGATCCTGCATAAGATCGACAAGGAAGGGGAGCGCCTG
CCC
CGGCCGGAGGACTGCCCTCAAGACATCTACAATGTCATGGTCCAGTGCTGGGCCCACAAGCCAGAGG
AC
AGACCCACATTTGTGGCTCTTCGGGACTTCCTGCTGGAGGCTCAGCCCACTGACATGCGGGCTCTTCA
G
GACTTTGAGGAGCCAGATAAACTGCACATCCAGATGAATGACGTCATCACTGTCATCGAGGGAAGGGCT
GAG
AACTACTGGTGGCGTGGGCAGAATACGCGGACCCTGTGTGTAGGACCCTTCCCTCGAAATGTCGTGA
CC
TCCGTGGCTGGCCTGTCAGCCCAGGACATCAGCCAGCCTCTACAGAATAGCTTCATTCACACAGGACA
T
GGTGACAGTGACCCCCGCCACTGCTGGGGGTTCCCTGACAGGATCGATGAACTGTACCTGGGAAACCCC
ATG
GACCCTCCTGACCTGCTGAGTGTGGAACTGAGCACCTCCCGACCCACCCAGCACCTAGGACGGGTGA
AA
AGGGAGCCTCCACCTCGCCCACCTCAGCCTGCCATCTTCACTCAGAAGCCAACATACGACCCTGTGAG
T
GAGGACCCAGACCCCCTGTCCAGCGACTTCAAGAGGCTTGGCCTGAGGAAGCCAGCCCTGCCTCGAGGG
CTG
TGGCTGGCAAAGCCCTCAGCCCGAGTGCCAGGCACCAAGGCAGACCGCAGCAGTGGGGGTGAGGTCA
CA
CTCATCGACTTCGGTGAGGAGCCTGTGGTCCCAACCCCTCGGCCCTGTGCACCCTCCTTGGCACAGTT
G
GCCATGGATGCCTGCTCCTTGCTGGACAAGACACCACCACAGAGCCCCACACGGGCACTGCCACGACCT
TTA
CACCCCACCCCTGTGGTAGACTGGGACGCGCGTCCGCTGCCCCCGCCCCCTGCCTATGACGACGTGG
CC
CAGGATGAGGATGACTTTGAGGTCTGCTCCATCAACAGCACGCTAGTAGGTGCAGGCCTCCCTGCTGG
G
CCTAGCCAAGGCGAGACCAATTACGCCTTTGTACCTGAGCAGGCGCAGATGCCCCCTGCCCTGGAGGAT
AAC
CTGTTCCTTCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCAGTGCAGACTGCAGAGATTTTCCAGG
CA
CTGCAGCAGGAGTGTATGCGGCAGCTACAGGTCCCCACTGGCCAGCTGACCCCCTCCCCGACCCCAGG
A
GGTGATGACAAGCCCCAGGTGCCACCCCGGGTACCTATTCCCCCTCGGCCCACGCGTCCACGTGTGGAG
CTA
TCTCCAGCTCCCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGACCTGCCTCGCCCCCCCGAGTGC
CT
CCCCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCCTAGTGCCACCTGGCAGCTCTCC
A
CTACCGCATCGGCTCTCTAGCTCACCTGGAAAGACCATGCCCACCACTCAAAGCTTTGCCTCAGACCCT
AAG
TATGCCACTCCACAAGTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGCATCCTGCCCATTGTCC
GC
GATGGCAGGAAGGTCAGCAGCACTCATTACTACCTGCTGCCTGAGCGCCCTCCTTACCTGGAACGCTA
T
CAGCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCCGGCCGCCCTGCCTGTGCCCCCGCTGTTGCCC
CCG
CCCAGTACTCCAGCCCCTGCTGCCCCCACTGCCACCGTCAGACCTATGCCTCAGGCCGCCCCAGACC
CA
AAGGCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGCTCG
G
CTGCCACAGAGGGGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTG
CAG
GCCATGGTGCATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAGTGTTC
AG
AGGGCTGCCCAGTATCTGAAGGTGGAGCAGCTCTTTGGGCTGGGTCTTCGGCCACGGGTGGAGTGCCA
C
AAGGTCCTAGAGATGTTCGACTGGAACCTAGAGCAAGCCGGCTGTCACCTTCTGGGCTCCTGTGGCCCT
GCT
CATCACAAACGCTGA


Translation (1055 aa):
MQPEEGTGWLLELLSEVQLQQYFLRLRDDLNITRLSHFEYVKNEDLEKIGMGRPGQRRLWEAVKRRKAMC
K
RKSWMSK
VFSGKRLEAEFPSQHSQSTFRKPSPTPGSLPGEGTLQSLTCLIGEKDLRLLEKLGDGSFGVV
R
RGEWDAPAGKT
VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTLPMKMVTELAPL
G
SLLDRLRKHQGHFLLGTLSRYAVQVAEGMAYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN
D
DHYVMQEHRKVPFA
WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL
P
RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE
AQPTDMRALQDFEEPDKLHIQMNDVITVIEGRA
E
NYWWRGQNTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRID
ELYLGNP
M
DPPDLLSVELSTSRPTQHLGRVK
REPPPRPPQPAIFTQKPTYDPVSEDPDPLSSDFKRLGLRKPALPRG
L
WLAKPSARVPGTKADRSSGGEVTLIDFGEEPVVPTPRPCAPSLAQLAMDACSLLDKTPPQSPTRALPRP
L
HPTPVVDWDARPLPPPPAYDDVAQDEDDFEVCSINSTLVGAGLPAGPSQGETNYAFVPEQAQMPPALED
N
LFLPPQGGGKPPSSVQTAEIFQALQQECMRQLQVPTGQLTPSPTPGGDDKPQVPPRVPIPPRPTRPRVE
L
SPAPSGEEETSRWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPLPHRLSSSPGKTMPTTQSFASDP
K
YATPQVIQAPGPRAGPCILPIVRDGRKVSSTHYYLLPERPPYLERYQRFLREAQSPEEPAALPVPPLLP
P
PSTPAPAAPTATVRPMPQAAPDPKANFSTNNSNPGARPPSLRATARLPQRGCPGDGQEAARPADKVQM
L
Q
AMVHGVTTEECQAALQSHSWSVQRAAQYLK
VEQLFGLGLRPRVECHKVLEMFDWNLEQAGCHLLGSCGP
A
HH
KR



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser