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Report for CCDS35605.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35605.1 Public Mus musculus 1 Cps1 23 108 98 CCDS HistoryNCBI Gene:227231Re-query CCDS DB by CCDS ID:35605.1Re-query CCDS DB by GeneID:227231See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35605.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027144.7 ENSMUSP00000027144.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027144.7Link to Ensembl Protein Viewer:ENSMUSP00000027144.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000027144Re-query CCDS DB by Protein ID:ENSMUSP00000027144
Original member Current member NCBI NM_001080809.2 NP_001074278.1 Accepted alive Link to Nucleotide Sequence:NM_001080809.2Link to Protein Sequence:NP_001074278.1Re-query CCDS DB by Nucleotide ID:NM_001080809Re-query CCDS DB by Protein ID:NP_001074278Link to BLAST:NP_001074278.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074278.1 1500 Q8C196 1500 100% 0 0

Chromosomal Locations for CCDS 35605.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 67123165 67123290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67139757 67139866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67142865 67143009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67143866 67143955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67145787 67145843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67148710 67148802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67152282 67152371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67156133 67156261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67156824 67156930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67157739 67157877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67158864 67158941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67160859 67160957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67162581 67162676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67165382 67165571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67166369 67166526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67168241 67168369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67170849 67170993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67172656 67172866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67174303 67174501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67176909 67177085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67180071 67180189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67195143 67195284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67196538 67196603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67197005 67197068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67198301 67198482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67204508 67204702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67205132 67205199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67206756 67206831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67209596 67209673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67212403 67212510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67214017 67214106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67215410 67215580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67217852 67217926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67220503 67220601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67227124 67227183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67228236 67228348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67229389 67229518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67230248 67230346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4503 nt):
ATGACGAGGATTTTGACAGCTTGCAAAGTGGTGAAGACCCTGAAGAGTGGCTTTGGTTTTGCCAATGTGA
CTACGAAGCGACAGTGGGACTTCTCCAGACCTGGCATCAGGCTCCTTTCTGTGAAGGCAAAGACAGCACA
CATTGTTCTGGAAGATGGAACTAAGATGAAAGGCTACTCCTTTGGCCATCCCTCCTCTGTTGCTGGTGAA
GTGGTTTTTAATACTGGCTTAGGAGGGTACCCGGAAGCACTTACTGATCCCGCCTACAAGGGGCAGATCC
TCACCATGGCCAACCCTATCATTGGGAACGGTGGGGCTCCCGACACCACTGCCCGAGACGAACTGGGACT
GAATAAGTACATGGAGTCTGATGGGATCAAGGTGGCAGGTCTGCTGGTTCTGAATTACAGTAATGACTAT
AACCACTGGCTGGCTACCAAGAGTCTGGGTCAATGGCTGCAGGAGGAAAAGGTCCCTGCAATTTATGGAG
TGGATACAAGAATGCTGACTAAAATAATTCGGGATAAGGGTACCATGCTTGGGAAGATTGAATTTGAAGG
CCAGTCTGTGGATTTTGTGGATCCCAATAAGCAGAATTTGATTGCTGAGGTTTCAACCAAGGATGTCAAG
GTGTTTGGCAAAGGAAACCCCACGAAAGTGGTAGCTGTGGACTGTGGGATAAAAAACAATGTCATCCGCC
TGCTAGTTAAGCGAGGAGCTGAAGTGCATTTGGTTCCCTGGAATCACGACTTCACCCAGATGGAGTATGA
TGGACTTTTGATTGCTGGGGGACCTGGGAATCCAGCTCTTGCACAGCCACTAATTCAGAATGTGAAAAAG
ATTTTGGAGAGTGACCGCAAAGAGCCATTGTTTGGAATCAGTACAGGAAACATAATAACAGGATTGGCTG
CTGGTGCCAAATCCTACAAGATGTCCATGGCCAACAGAGGACAGAACCAACCTGTTTTGAATATCACAAA
CAGACAGGCTTTCATAACTGCTCAGAATCATGGCTATGCTCTGGACAACACACTCCCTGCTGGCTGGAAA
CCACTGTTTGTGAATGTCAATGATCAAACAAACGAGGGGATTATGCATGAGAGCAAACCTTTCTTCGCTG
TGCAGTTCCACCCAGAGGTCAGCCCGGGGCCAACAGACACTGAGTACCTATTTGATTCCTTCTTCTCCCT
GATAAAGAAGGGCAAAGGCACCACCATTACCTCAGTTCTGCCCAAGCCAGCGTTGGTGGCATCTCGTGTC
GAGGTTTCCAAGGTCCTCATCCTGGGATCAGGAGGTCTGTCCATTGGTCAGGCAGGTGAATTTGATTACT
CGGGATCTCAAGCTGTGAAAGCCATGAAGGAAGAAAATGTCAAAACAGTCCTGATGAACCCGAACATCGC
ATCCGTGCAGACCAACGAGGTGGGATTGAAGCAGGCAGATGCAGTCTACTTTCTCCCTATTACCCCCCAG
TTTGTCACAGAAGTTATCAAGGCTGAACGGCCTGATGGGCTGATTCTGGGCATGGGTGGCCAGACAGCTC
TGAACTGTGGAGTGGAACTATTCAAGAGGGGTGTGCTCAAGGAATATGGGGTGAAGGTCTTGGGCACATC
AGTTGAGTCCATTATGGCCACAGAAGACAGGCAGCTGTTCTCAGACAAGCTGAATGAGATCAACGAGAAG
ATCGCACCCAGTTTTGCAGTGGAATCAATGGAGGATGCCTTGAAGGCAGCAGACACCATTGGCTACCCTG
TGATGATTCGGTCTGCATATGCTCTGGGTGGCTTAGGCTCTGGCATCTGTCCCAATAAGGAGACCTTAAT
AGACCTTGGCACAAAAGCATTTGCTATGACCAACCAGATCCTGGTGGAGCGGTCAGTGACAGGTTGGAAA
GAAATAGAATATGAAGTTGTCCGAGATGCAGATGATAACTGTGTCACAGTCTGTAACATGGAAAATGTTG
ACGCCATGGGTGTTCACACAGGTGACTCGGTTGTCGTGGCCCCAGCCCAGACACTCTCCAATGCAGAGTT
CCAGATGTTGAGACGCACTTCAGTCAATGTTGTTCGTCACTTGGGCATTGTGGGCGAATGCAACATTCAG
TTTGCTCTTCACCCCACTTCCATGGAATACTGTATCATTGAAGTGAATGCCAGGCTGTCCCGGAGTTCTG
CCCTGGCCTCCAAGGCCACTGGCTACCCACTGGCATTCATTGCAGCAAAGATTGCTCTAGGAATCCCACT
TCCAGAAATCAAGAATGTTGTATCTGGGAAGACCTCAGCCTGCTTCGAACCTAGCCTGGATTACATGGTG
ACCAAGATTCCTCGCTGGGATCTTGACCGTTTCCATGGAACATCCAGCCGAATTGGTAGCTCAATGAAAA
GTGTGGGCGAGGTCATGGCCATTGGTCGCACCTTTGAGGAAAGTTTCCAGAAGGCTCTGAGGATGTGCCA
TCCATCTGTGGATGGGTTCACTCCCCGGCTCCCAATGAATAAGGAATGGCCAGCAAACCTGGATCTGAAG
AAAGAGCTGTCTGAGCCCTCCAGCACCCGCATCTACGCCATTGCTAAGGCCTTGGAGAACAACATGTCCC
TCGACGAAATTGTGAGGCTCACGTCCATCGACAAGTGGTTTCTGTACAAGATGCGTGACATTTTAAACAT
GGATAAGACACTGAAAGGGCTTAACAGTGACTCTGTTACAGAAGAAACTCTGAGAAAGGCCAAGGAGATT
GGGTTCTCAGACAAGCAGATTTCAAAATGTTTGGGACTGACTGAAGCCCAGACAAGAGAGCTGAGGTTAA
AGAAAAACATCCACCCTTGGGTTAAACAGATTGATACATTGGCTGCAGAATACCCATCAGTAACAAACTA
CCTGTATGTTACCTACAACGGCCAGGAGCACGATATCAAATTTGATGAACATGGAATAATGGTTCTGGGC
TGTGGTCCATACCACATTGGCAGCAGTGTGGAATTTGATTGGTGTGCTGTCTCCAGTATCCGTACACTGC
GCCAACTTGGCAAGAAGACAGTGGTGGTGAATTGTAACCCAGAGACTGTGAGCACTGATTTTGATGAGTG
TGACAAACTCTACTTTGAAGAGCTGTCTTTGGAGAGAATCCTAGACATCTACCACCAGGAGGCATGTAAT
GGCTGCATCATATCAGTTGGCGGCCAGATTCCAAACAACTTGGCGGTCCCGCTGTACAAGAATGGTGTCA
AGATCATGGGTACAAGCCCTCTGCAGATCGACAGGGCTGAGGATCGCTCCATCTTCTCAGCTGTCTTAGA
TGAGCTAAAGGTGGCCCAGGCTCCATGGAAAGCTGTGAACACTTTGAATGAAGCACTGGAATTTGCAAAC
TCTGTGGGCTACCCCTGCTTACTGAGACCTTCCTATGTTTTGAGTGGGTCTGCCATGAACGTGGTATTCT
CTGAGGATGAGATGAAAAGGTTTCTTGAGGAGGCCACTCGAGTCTCTCAGGAACACCCGGTGGTGCTGAC
CAAGTTTGTGGAGGGGGCCCGGGAAGTAGAGATGGACGCTGTTGGCAAAGAAGGACGGGTCATCTCCCAT
GCCATCTCTGAACATGTTGAAGATGCAGGTGTCCACTCAGGAGATGCCACCCTGATGCTACCTACACAGA
CCATCAGCCAAGGAGCCATTGAAAAGGTGAAGGATGCCACACGAAAGATTGCAAAAGCCTTTGCCATCTC
TGGGCCATTCAATGTCCAGTTTCTTGTCAAAGGAAATGATGTCTTGGTGATTGAGTGCAATCTGAGAGCA
TCAAGATCCTTCCCCTTTGTCTCCAAGACTCTTGGGGTGGACTTCATTGACGTGGCTACAAAGGTGATGA
TCGGGGAGAGCATTGATGAGAAGCGACTTCCCACGCTGGAGCAGCCCATCATTCCCTCTGACTATGTTGC
CATTAAGGCTCCAATGTTTTCCTGGCCCCGACTGAGAGATGCTGACCCTATTCTGAGATGTGAGATGGCT
TCTACTGGAGAGGTGGCGTGCTTCGGCGAGGGCATTCATACCGCCTTCCTAAAGGCCATGCTGTCTACAG
GGTTTAAGATACCTCAGAAGGGCATTCTGATTGGAATCCAGCAATCATTCCGTCCAAGATTCCTTGGTGT
TGCTGAGCAGTTGCACAATGAAGGTTTCAAGCTTTTTGCCACAGAAGCTACATCAGACTGGCTCAATGCC
AACAATGTCCCTGCCACCCCTGTGGCTTGGCCATCTCAGGAAGGACAGAATCCCAGCCTCTCTTCCATCA
GAAAGTTGATAAGAGATGGAAGCATTGACCTAGTGATTAACCTCCCCAATAACAACACCAAATTTGTCCA
TGATAATTACGTGATTCGGAGGACAGCTGTGGACAGTGGAATTGCTCTCCTCACCAATTTCCAGGTGACC
AAACTTTTTGCTGAAGCTGTGCAGAAATCTCGCACTGTGGACTCCAAGAGTCTGTTCCACTACAGGCAGT
ACAGTGCTGGAAAGGCCGCCTAA

Translation (1500 aa):
MTRILTACKVVKTLKSGFGFANVTTKRQWDFSRPGIRLLSVKAKTAHIVLEDGTKMKGYSFGHPSSVAGE
VVFNTGLGGYPEALTDPAYKGQILTMANPIIGNGGAPDTTARDELGLNKYMESDGIKVAGLLVLNYSNDY
NHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKIEFEGQSVDFVDPNKQNLIAEVSTKDVK
VFGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVHLVPWNHDFTQMEYDGLLIAGGPGNPALAQPLIQNVKK
ILESDRKEPLFGISTGNIITGLAAGAKSYKMSMANRGQNQPVLNITNRQAFITAQNHGYALDNTLPAGWK
PLFVNVNDQTNEGIMHESKPFFAVQFHPEVSPGPTDTEYLFDSFFSLIKKGKGTTITSVLPKPALVASRV
EVSKVLILGSGGLSIGQAGEFDYSGSQAVKAMKEENVKTVLMNPNIASVQTNEVGLKQADAVYFLPITPQ
FVTEVIKAERPDGLILGMGGQTALNCGVELFKRGVLKEYGVKVLGTSVESIMATEDRQLFSDKLNEINEK
IAPSFAVESMEDALKAADTIGYPVMIRSAYALGGLGSGICPNKETLIDLGTKAFAMTNQILVERSVTGWK
EIEYEVVRDADDNCVTVCNMENVDAMGVHTGDSVVVAPAQTLSNAEFQMLRRTSVNVVRHLGIVGECNIQ
FALHPTSMEYCIIEVNARLSRSSALASKATGYPLAFIAAKIALGIPLPEIKNVVSGKTSACFEPSLDYMV
TKIPRWDLDRFHGTSSRIGSSMKSVGEVMAIGRTFEESFQKALRMCHPSVDGFTPRLPMNKEWPANLDLK
KELSEPSSTRIYAIAKALENNMSLDEIVRLTSIDKWFLYKMRDILNMDKTLKGLNSDSVTEETLRKAKEI
GFSDKQISKCLGLTEAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDIKFDEHGIMVLG
CGPYHIGSSVEFDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDFDECDKLYFEELSLERILDIYHQEACN
GCIISVGGQIPNNLAVPLYKNGVKIMGTSPLQIDRAEDRSIFSAVLDELKVAQAPWKAVNTLNEALEFAN
SVGYPCLLRPSYVLSGSAMNVVFSEDEMKRFLEEATRVSQEHPVVLTKFVEGAREVEMDAVGKEGRVISH
AISEHVEDAGVHSGDATLMLPTQTISQGAIEKVKDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLRA
SRSFPFVSKTLGVDFIDVATKVMIGESIDEKRLPTLEQPIIPSDYVAIKAPMFSWPRLRDADPILRCEMA
STGEVACFGEGIHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEATSDWLNA
NNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIALLTNFQVT
KLFAEAVQKSRTVDSKSLFHYRQYSAGKAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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