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Report for CCDS29677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29677.1 Public Mus musculus 19 Or9i1 23 108 98 CCDS HistoryNCBI Gene:258793Re-query CCDS DB by CCDS ID:29677.1Re-query CCDS DB by GeneID:258793See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29677.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074221.1 ENSMUSP00000073843.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074221.1Link to Ensembl Protein Viewer:ENSMUSP00000073843.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000074221Re-query CCDS DB by Protein ID:ENSMUSP00000073843
Original member Current member NCBI NM_146797.1 NP_667008.1 Accepted alive Link to Nucleotide Sequence:NM_146797.1Link to Protein Sequence:NP_667008.1Re-query CCDS DB by Nucleotide ID:NM_146797Re-query CCDS DB by Protein ID:NP_667008Link to BLAST:NP_667008.1

Chromosomal Locations for CCDS 29677.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13861795 13862745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGCCAAGAATAACATTACCACAGTAACGGAATTCATCCTAATAGGCTTTAATGACCACCCCAAGTGGG
AGATTCCACTATTGCTGGTATTTCTTAGCTTTTATCTTGTCACCATGCTGGGAAATTTGGGCATGGTCAT
TCTTATCCATGTAGATGTCCAACTCCACATCCCAATGTACTTCTTTCTGAGCCATCTCTCTGTGTTGGAT
GCCTGCTATACTTCAGTCATCACCCCTCAGATACTGGCAACGCTGGCTACAGGTAAAACAGTCATTTCCT
ATAGATGTTGTGCTGCCCAGTTCTTCTTCTTCACTATCTGTGCAGCTACAGAATGTTTCCTGCTGTCTGT
GATGGCCTATGATCGCTATGTTGCTATTAGCAATCCACTGCTCTACACTGTGGCCATGGGCCCTAGAAAA
TGTTGGAGTTTAGTAGTAGGAGCATATATCTGTGGAGTGTGTGGGGCCATTCTGCGTACCACATGCACCT
TCTCTCTCTCCTTCTGTGAAAATAATCAGATCAATTTCTTCTTTTGTGACCTCCCACCTCTGCTGAAGCT
GGCCTGTAGTGACACAACAAATATTGAAATTATCATTGTCTTCTTTGGGAATTTTGTAATTTTGGCCAAT
GCCTTAGTCATCCTCATTTCCTACCTGCTCATCATCAAAGCTGTCATGAGAATGAAGTCTTCAGGTAGAA
GAGCAAAGACTTTCTCAACATGTGTCTCCCACCTCACTGCTGTGGCTCTTTTATTTGGGACACTCATCTT
TATGTACATACGTAGTGGTTCAAAAAAATCCCTGGATGAAGATAAAGTTGTGTCTGTCTTCTACACTGTG
GTCATTCCCATGCTGAACCCACTAATCTACAGCCTAAGGAACAAGGATGTCAAGGCTGCATTCAAGAAGG
TGACTGGTAAATGCCAGGTTTCCCAATGCACACAACACTGA

Translation (316 aa):
MAKNNITTVTEFILIGFNDHPKWEIPLLLVFLSFYLVTMLGNLGMVILIHVDVQLHIPMYFFLSHLSVLD
ACYTSVITPQILATLATGKTVISYRCCAAQFFFFTICAATECFLLSVMAYDRYVAISNPLLYTVAMGPRK
CWSLVVGAYICGVCGAILRTTCTFSLSFCENNQINFFFCDLPPLLKLACSDTTNIEIIIVFFGNFVILAN
ALVILISYLLIIKAVMRMKSSGRRAKTFSTCVSHLTAVALLFGTLIFMYIRSGSKKSLDEDKVVSVFYTV
VIPMLNPLIYSLRNKDVKAAFKKVTGKCQVSQCTQH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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