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Report for CCDS27863.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27863.1 Public Mus musculus 15 Krt72 23 108 98 CCDS HistoryNCBI Gene:105866Re-query CCDS DB by CCDS ID:27863.1Re-query CCDS DB by GeneID:105866See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27863.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071104.5 ENSMUSP00000065922.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071104.5Link to Ensembl Protein Viewer:ENSMUSP00000065922.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000071104Re-query CCDS DB by Protein ID:ENSMUSP00000065922
Original member Current member NCBI NM_213728.2 NP_998893.1 Accepted alive Link to Nucleotide Sequence:NM_213728.2Link to Protein Sequence:NP_998893.1Re-query CCDS DB by Nucleotide ID:NM_213728Re-query CCDS DB by Protein ID:NP_998893Link to BLAST:NP_998893.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_998893.1 520 Q6IME9 520 100% 0 0

Chromosomal Locations for CCDS 27863.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101776560 101776750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101777570 101777604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101778173 101778393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101780128 101780253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101780906 101781070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101781556 101781651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101782087 101782147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101784810 101785024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101786006 101786458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGAGCCGCCAGTTGACCCTCTATCCCGGAGCTGAGCGCCTGGGTTTCAGTGGCTGCTCTGCGGTCATCT
CAGGCAGGCTCAGTGGCAGTCACGCCTCGGTCCGAGCTGGAGTCAAGGGAGCAGCATTTGGGAGCAGAAG
CCTGTTCTGTGTGGGGGGAGGCCGGCGGCTGGCGTTGAGCTCTGCAGGGCGAAGTGGTGGCTTCACGCTG
GGCCACGGAGGGGCGAGCGGTGGGCGGCCTGGGGGCTTCGTGGGCACCGTCTTCGGCAGCGCGGGACTGG
GGCCCACATGCCCATCAGTGTGCCCTCCCGGTGGCATCCCCCAGGTTGTCGTCAACAAGAGCCTTCTGGC
CCCACTCAATGTGGAGCTGGACCCGGAGATCCAGAAGGTGCGGGCACAAGAGAGGGAGCAGATCAAGGCT
CTGAACAACAAGTTTGCCTCCTTCATTGACAAGGTCCGCTTCTTGGAGCAACAGAACCAGGTACTGGAGA
CCAAGTGGGAGCTGCTGCAGCAGCTGGACCTAAACAACTCCAAGAGGAGCCTGGAGCCTGTGCATGAGAG
TTACATCAGCAACCTGCAGAAGCAGCTGGAGATCCTGTCTGGGGATAGGGTGAGGCTGGACTCAGAGCTG
AGGAACATGAGGGAAGTGGTGGAGGACTGCAAGAAGAGGTACGAGGTGGAGATTAACAGACGCACGGCTG
CCGAGAACGAGTTCGTGGTGCTGAAGAAGGATGTGGACGCAGCTTACATGAACAAGGTGGAGCTCCAGGC
CAAGGTGGACTCCTTGACAGATGACATCAAATTCTTCAAGGTTCTCTTTGAAGGGGAGATAGCTCAGATG
CAGTCCCACATCAGCGACACATCCGTCATTCTCTCCATGGACAATAACCGGCAGCTGGACCTGGACAGCA
TCCTCGCTGAGGTTCGAGCCCAGTATGAGGAGATTGCTGTGAAGAGCAAGGCAGAGACGGAGAACATGTA
CCAGTGTAAGATCCAGGAGCTGCAGGCCACTGCAGGCCAACACGGGGATGACCTCAAACACACCAAGTCT
GAGATCACAGAGATCAACAGGCTGATCCAGAGGATCCATTCAGAGATAGGAAACATGAAGAAGCAGTGCT
CCAACCTGGAGACGGCCATTGCTGACGCTGAACAGAGAGGTGACTGTGCTCTCAAGGATGCCCGGGCCAA
GCTGGACCAGCTGGAGGGAGCCCTGCAGCAGGCCAAGGAGGAGCTGGCCCGGATGCTGCGTGAGCATCAG
GAGCTCATGAATGTCAAGCTCGCCCTGGACATGGAGATCGCCACCTACAGGAAGCTTCTGGAGAGCGAGG
AGAGCCGGATGGCTGGTGAATACCCAAATTCTGTGAGCATTTCTGTCATTAGCAGTACCAATGCAGGACC
AGGAGGTGCTGGCTTCAGTGTGGGCTTTGGTGCCTCGAGCAGTTACAACTATAGACCTCTGGCCCTGGAG
GTGAAGACCAAGGGTAGCTGTGGCAGCGAGCTCAAGGATCCTCCGGCCAAAACCTCAGGCAGCAGCGGTA
CAACCAAAAAGACCTCCAGATGA

Translation (520 aa):
MSRQLTLYPGAERLGFSGCSAVISGRLSGSHASVRAGVKGAAFGSRSLFCVGGGRRLALSSAGRSGGFTL
GHGGASGGRPGGFVGTVFGSAGLGPTCPSVCPPGGIPQVVVNKSLLAPLNVELDPEIQKVRAQEREQIKA
LNNKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNSKRSLEPVHESYISNLQKQLEILSGDRVRLDSEL
RNMREVVEDCKKRYEVEINRRTAAENEFVVLKKDVDAAYMNKVELQAKVDSLTDDIKFFKVLFEGEIAQM
QSHISDTSVILSMDNNRQLDLDSILAEVRAQYEEIAVKSKAETENMYQCKIQELQATAGQHGDDLKHTKS
EITEINRLIQRIHSEIGNMKKQCSNLETAIADAEQRGDCALKDARAKLDQLEGALQQAKEELARMLREHQ
ELMNVKLALDMEIATYRKLLESEESRMAGEYPNSVSISVISSTNAGPGGAGFSVGFGASSSYNYRPLALE
VKTKGSCGSELKDPPAKTSGSSGTTKKTSR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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