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Report for CCDS27641.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27641.1 Public Mus musculus 15 Kcnj4 23 108 98 CCDS HistoryNCBI Gene:16520Re-query CCDS DB by CCDS ID:27641.1Re-query CCDS DB by GeneID:16520See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27641.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057801.7 ENSMUSP00000094075.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057801.7Link to Ensembl Protein Viewer:ENSMUSP00000094075.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000057801Re-query CCDS DB by Protein ID:ENSMUSP00000094075
Original member Current member NCBI NM_008427.5 NP_032453.3 Accepted alive Link to Nucleotide Sequence:NM_008427.5Link to Protein Sequence:NP_032453.3Re-query CCDS DB by Nucleotide ID:NM_008427Re-query CCDS DB by Protein ID:NP_032453Link to BLAST:NP_032453.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032453.3 445 P52189 445 99.1011% 0 4

Chromosomal Locations for CCDS 27641.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 79484440 79485777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGCACGGACACAACCGAAACGGGCAGGCCCACGTGCCCAGGCGGAAACGCCGCAACCGCTTTGTCAAGA
AGAACGGCCAGTGTAACGTCTACTTCGCCAACCTGAGCAACAAGTCCCAGCGCTACATGGCAGACATCTT
CACCACCTGCGTGGACACGCGCTGGCGCTATATGCTCATGATCTTCTCCGCGGCCTTCCTCGTTTCCTGG
CTCTTCTTCGGCCTCCTCTTCTGGTGCATTGCCTTCTTCCATGGTGACCTGGAGGCCAGTCCCTCTGTGC
CCGCGGCAGGAGGCCCGGGGGGCAATGGCGGGGCAAGCCCGAATGCCCCCAAACCCTGTATCATGCACGT
AAACGGCTTTTTGGGGGCCTTCCTCTTCTCAGTGGAGACCCAGACGACCATTGGCTACGGGTTCCGGTGT
GTGACAGAGGAGTGCCCGTTGGCGGTCATTGCGGTGGTTGTCCAGTCCATTGTGGGCTGTGTCATTGACT
CCTTCATGATTGGCACGATCATGGCCAAGATGGCACGGCCCAAGAAGCGGGCACAGACCCTGCTGTTCAG
CCACCATGCTGTCATCTCCGTTCGAGACGGCAAGCTCTGCCTGATGTGGCGCGTGGGTAACCTGCGCAAG
AGTCACATTGTGGAGGCCCACGTCCGGGCCCAGCTCATCAAACCCTACATGACACAGGAGGGTGAGTACC
TGCCACTGGACCAGCGGGACCTCAACGTGGGCTATGACATCGGCCTGGACCGCATCTTCTTGGTGTCACC
CATCATCATAGTGCATGAAATCGACGAGGACAGCCCACTCTACGGCATGGGCAAGGAGGAGCTGGAGTCA
GAGGACTTTGAGATTGTGGTCATCCTGGAGGGTATGGTGGAGGCCACGGCTATGACCACTCAGGCCCGCA
GCTCCTATCTGGCCAGTGAGATCCTGTGGGGTCACCGGTTTGAGCCTGTGGTCTTCGAGGAAAAGAGTCA
CTACAAGGTGGACTACTCACGATTCCACAAGACCTATGAGGTGGCTGGCACGCCTTGCTGCTCCGCCCGT
GAGCTGCAGGAGAGCAAGATCACGGTGCTGCCCGCCCCACCGCCCCCTCCCAGTGCCTTCTGCTATGAGA
ATGAGCTGGCCCTTATGAGCCAGGAGGAAGAGGAGATGGAAGAGGAGGCTGCGGCCGCAGCAGCCGTGGC
TGCAGGCCTGGGCCTGGAGGCAGGTTCCAAAGAGGAGGCAGGCATTATCCGGATGCTTGAGTTTGGCAGC
CACCTGGATCTGGAGCGCATGCAAGCCGCCACCCTTCCACTGGACAATATTTCCTATCGCAGGGAATCTG
CCATCTGA

Translation (445 aa):
MHGHNRNGQAHVPRRKRRNRFVKKNGQCNVYFANLSNKSQRYMADIFTTCVDTRWRYMLMIFSAAFLVSW
LFFGLLFWCIAFFHGDLEASPSVPAAGGPGGNGGASPNAPKPCIMHVNGFLGAFLFSVETQTTIGYGFRC
VTEECPLAVIAVVVQSIVGCVIDSFMIGTIMAKMARPKKRAQTLLFSHHAVISVRDGKLCLMWRVGNLRK
SHIVEAHVRAQLIKPYMTQEGEYLPLDQRDLNVGYDIGLDRIFLVSPIIIVHEIDEDSPLYGMGKEELES
EDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVVFEEKSHYKVDYSRFHKTYEVAGTPCCSAR
ELQESKITVLPAPPPPPSAFCYENELALMSQEEEEMEEEAAAAAAVAAGLGLEAGSKEEAGIIRMLEFGS
HLDLERMQAATLPLDNISYRRESAI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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