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Report for CCDS26133.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26133.1 Public Mus musculus 12 Ifi27l2b 23 108 98 CCDS HistoryNCBI Gene:217845Re-query CCDS DB by CCDS ID:26133.1Re-query CCDS DB by GeneID:217845See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26133.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044687.6 ENSMUSP00000041712.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044687.6Link to Ensembl Protein Viewer:ENSMUSP00000041712.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000044687Re-query CCDS DB by Protein ID:ENSMUSP00000041712
Original member Current member NCBI NM_145449.2 NP_663424.1 Accepted alive Link to Nucleotide Sequence:NM_145449.2Link to Protein Sequence:NP_663424.1Re-query CCDS DB by Nucleotide ID:NM_145449Re-query CCDS DB by Protein ID:NP_663424Link to BLAST:NP_663424.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663424.1 283 Q8VC49 283 100% 0 0

Chromosomal Locations for CCDS 26133.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 103451075 103451352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103451806 103451967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103452471 103452500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103455722 103455904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103456358 103456519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103457015 103457044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103457153 103457159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGAAGAGAAAATTTGTGGGCGCTGCTATAGGAGGAGCTCTGGCTGTGGCAGGGGCACCTGTCGCCCTGA
GTGCCGTGGGCTTCACTGGGGCAGGCATTGCAGCTGGGTCCATAGCAGCCAAGATGATGTCTGCTGCAGC
AATTGCCAATGGAGGTGGAATTGCAGCAGGAGGCCTGGTAGCCACACTCCAGTCAGTGGGGGTCCTTGGA
CTCTCCACAATAACCAACATCATCCTGGTGGCTGTTGGGACAGCCACAGGAGCTAGAGCTGAAGGATCCA
TGGGAGCCTCCAGAGAGCAGGAGTCAGGGCCTCAGGATCCTCCGCAGGAGCTGCAGGAGCCACAGGAGCC
TCCAAGTTGTAAGAAGCAAGATTTGAATTTAGGAAAATTTGTGGGCGCTGCTATAGGAGGAGCTCTGGCT
GTGGCAGGGGCACCTATCGCCCTGAGTGCCGTGGGCTTCACTGGGGCAGGCATTGCAGCTGGGTCCATAG
CAGCCAAGATGATGTCTGCTGCAGCAATTGCCAATGGAGGTGGAATTGCAGCAGGAGGCCTGGTAGCCAC
ACTCCAGTCAGTGGGGATCCTTGGACTCTCCACATCAACCAATATCATCCTTGGAGCTGTTGGGGCAGCC
ACAGGAGCTACAGCTGCAGGAGCCATGGGAGCCTGCAGAGAGCAGGAGCCAGGACTGCAGGATCTTCAGC
AAGAGCCAAAGGAGCCACAGGAGCCACAGGAGCTGCAGAAGCAGCAGGAGCCACAGGAGCCTCAGGAGCT
GCAGAAGCAGCAGGAGACACAGGAGACACAGGAGACGCAGGAACTGCAGAAGACACAGGAGCCTCCAAGT
TATGAGAAGTGA

Translation (283 aa):
MKRKFVGAAIGGALAVAGAPVALSAVGFTGAGIAAGSIAAKMMSAAAIANGGGIAAGGLVATLQSVGVLG
LSTITNIILVAVGTATGARAEGSMGASREQESGPQDPPQELQEPQEPPSCKKQDLNLGKFVGAAIGGALA
VAGAPIALSAVGFTGAGIAAGSIAAKMMSAAAIANGGGIAAGGLVATLQSVGILGLSTSTNIILGAVGAA
TGATAAGAMGACREQEPGLQDLQQEPKEPQEPQELQKQQEPQEPQELQKQQETQETQETQELQKTQEPPS
YEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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