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Report for CCDS23061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23061.1 Public Mus musculus 9 Or8g54 23 108 98 CCDS HistoryNCBI Gene:258823Re-query CCDS DB by CCDS ID:23061.1Re-query CCDS DB by GeneID:258823See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23061.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074566.1 ENSMUSP00000074151.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074566.1Link to Ensembl Protein Viewer:ENSMUSP00000074151.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000074566Re-query CCDS DB by Protein ID:ENSMUSP00000074151
Original member Current member EBI ENSMUST00000213266.1 ENSMUSP00000149551.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213266.1Link to Ensembl Protein Viewer:ENSMUSP00000149551.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213266Re-query CCDS DB by Protein ID:ENSMUSP00000149551
Original member Current member NCBI NM_146826.1 NP_667037.1 Accepted alive Link to Nucleotide Sequence:NM_146826.1Link to Protein Sequence:NP_667037.1Re-query CCDS DB by Nucleotide ID:NM_146826Re-query CCDS DB by Protein ID:NP_667037Link to BLAST:NP_667037.1

Chromosomal Locations for CCDS 23061.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 39795377 39796312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGTTAAAAGGAAATCTTTCCGAAGTGACTGAGTTCATCCTCGCTGGGTTAACAAACAAACCAGAGCTGC
AGCTGCCCCTCTTCTTCCTCTTTCTAGCAATCTATGTGGTCACAGTGGTGGGGAATCTGGGCATGATCAC
TCTGATACTATTCAGTTCTCAACTGCACACACCCATGTACTTTTTTCTCAGCAGTCTGTCCTTCATTGAC
CTCTGCCAGTCCACTGTCATTATTCCCAAAATGCTGGTGAACTTTGTGACAGTGAAGAACATCATCTCCT
ATCCTGAATGCATGACTCAGCTCTACTTTTTTGTTACTTTTGCTATTGCAGAGTGTCACATGTTAGCTGT
AATGGCATATGATCGCTATGTTGCCATCGGTAACCCCTTGCTTTACAATATTATGATGTCCTATCGAGTC
TGTTCTTGGATGATATTTGGAGTATATATTATGGCTTTTATTGGTGCCACATCTCACACAGTCTGCATGT
TAAGAGTGCATTTCTGTAAGACTGATGTAATAAATCATTACTTTTGTGATATTTATCCACTACTGGAACT
CTCTTGTTCTGATACCTTTATTAATGAAGTAGTACTTTTATGTTTCAGTGTTTTTAACTTCTTGATTCCA
ACTCTGACAATTCTAAGCTCTTACATCTTCATCATAGCCAGCATCCTCCGGATTAAATCCACTGAAGGCA
GGTACAAAGCCTTCAGCACCTGCAGCTCACACATCTCTGCAGTTGCTATCTTCTTTGGGTCTACTGCATT
TATGTACTTGCAGCCATCTTCGGTCAACTCTATGGATCAAGGGAAAGTGTCTTCTGTATTTTATAGCATT
GTTGTGCCCATGCTGAACCCTTTGATCTACAGCCTGAGAAATAAGGATGTCAAAGTTGCTCTAAATAAGT
TCTTTGAAAGAAAGTTTTTCTTGTGA

Translation (311 aa):
MLKGNLSEVTEFILAGLTNKPELQLPLFFLFLAIYVVTVVGNLGMITLILFSSQLHTPMYFFLSSLSFID
LCQSTVIIPKMLVNFVTVKNIISYPECMTQLYFFVTFAIAECHMLAVMAYDRYVAIGNPLLYNIMMSYRV
CSWMIFGVYIMAFIGATSHTVCMLRVHFCKTDVINHYFCDIYPLLELSCSDTFINEVVLLCFSVFNFLIP
TLTILSSYIFIIASILRIKSTEGRYKAFSTCSSHISAVAIFFGSTAFMYLQPSSVNSMDQGKVSSVFYSI
VVPMLNPLIYSLRNKDVKVALNKFFERKFFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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