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Report for CCDS21764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21764.1 Public Mus musculus 7 Calcb 21 106 86 CCDS HistoryNCBI Gene:116903Re-query CCDS DB by CCDS ID:21764.1Re-query CCDS DB by GeneID:116903See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21764.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000032902 ENSMUSP00000032902 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032902Link to Ensembl Protein Viewer:ENSMUSP00000032902Re-query CCDS DB by Nucleotide ID:ENSMUST00000032902Re-query CCDS DB by Protein ID:ENSMUSP00000032902
Original member Current member EBI,WTSI OTTMUST00000116719 OTTMUSP00000065095 Accepted alive Link to Vega Transcript Viewer:OTTMUST00000116719Link to Vega Protein Viewer:OTTMUSP00000065095Re-query CCDS DB by Nucleotide ID:OTTMUST00000116719Re-query CCDS DB by Protein ID:OTTMUSP00000065095
Original member Current member NCBI NM_054084.2 NP_473425.2 Accepted alive Link to Nucleotide Sequence:NM_054084.2Link to Protein Sequence:NP_473425.2Re-query CCDS DB by Nucleotide ID:NM_054084Re-query CCDS DB by Protein ID:NP_473425Link to BLAST:NP_473425.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_473425.2 130 Q99MP3 130 99.2308% 0 1

Chromosomal Locations for CCDS 21764.1

Assembly GRCm38.p4 (GCF_000001635.24)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7Link to Vega Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 114719742 114719830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7Link to Vega Genome Browser on chromosome 7
7 114720074 114720214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7Link to Vega Genome Browser on chromosome 7
7 114721975 114722137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7Link to Vega Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGGACTTTTGGAAGTTCTTTCCTTTTCTGGCTCTCAGCAGCATATGGGTCCTGTGCCTGGCCAGCAGCC
TC
CAGGCTGCCCCTTTCAGGTCCGCTTTGGAGAGCAGCCTAGACCTGGGCACCCTCGGCGACCAGGAAAA
A
CATCTCTTGCTTGCTGCACTGATGCAGGACTATGAGCAGATGAAGGCCAGGAAGCTGGAACAGGAGGAG
CAA
GAGACTAAGGGCTCCCGTGTCACTGCTCAGAAGAGATCCTGCAACACTGCCACCTGTGTGACCCATC
GG
CTGGCAGACCTGCTGAGCAGATCAGGAGGTGTGCTGAAGGACAACTTTGTGCCCACCGATGTGGGCTC
T
GAAGCCTTCGGCCGCCGCCGCCGCAGGGACCTGCAGGCCTGA


Translation (130 aa):
MDFWKFFPFLALSSIWVLCLASSLQAAPFRSALESSLDLGTLGDQEKHLLLAALMQDYEQMKARKLEQEE
Q
ETKGS
RVTAQKRSCNTATCVTHRLADLLSRSGGVLKDNFVPTDVGSEAFGRRRRRDLQA



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser