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Report for CCDS21666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21666.1 Public Mus musculus 7 Or2ag1b 23 108 98 CCDS HistoryNCBI Gene:258444Re-query CCDS DB by CCDS ID:21666.1Re-query CCDS DB by GeneID:258444See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21666.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052535.5 ENSMUSP00000057180.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052535.5Link to Ensembl Protein Viewer:ENSMUSP00000057180.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000052535Re-query CCDS DB by Protein ID:ENSMUSP00000057180
Original member Current member EBI ENSMUST00000082091.1 ENSMUSP00000080740.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000082091.1Link to Ensembl Protein Viewer:ENSMUSP00000080740.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000082091Re-query CCDS DB by Protein ID:ENSMUSP00000080740
Original member Current member EBI ENSMUST00000216118.2 ENSMUSP00000150217.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216118.2Link to Ensembl Protein Viewer:ENSMUSP00000150217.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216118Re-query CCDS DB by Protein ID:ENSMUSP00000150217
Original member Current member EBI ENSMUST00000216895.1 ENSMUSP00000151027.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216895.1Link to Ensembl Protein Viewer:ENSMUSP00000151027.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216895Re-query CCDS DB by Protein ID:ENSMUSP00000151027
Original member Current member NCBI NM_146452.2 NP_666663.2 Accepted alive Link to Nucleotide Sequence:NM_146452.2Link to Protein Sequence:NP_666663.2Re-query CCDS DB by Nucleotide ID:NM_146452Re-query CCDS DB by Protein ID:NP_666663Link to BLAST:NP_666663.2

Chromosomal Locations for CCDS 21666.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 106688782 106689729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGAAGTCTGCAACTCCACCCTGGGAAGTGGATTCATCTTGGTGGGGATTCTGGATGACAGTGGTTTTC
CAGAGCTGCTCTGTGCCACTATCACAGCCCTGTACTTTTTAGCCATAACCAGCAATGGACTGCTGCTTCT
GGTCATCACCATGGATGCCCGGCTCCATGTTACCATGTATCTTCTGCTATGGCAGCTCTCTCTCATGGAC
TTGCTTCTCACATCAGTCATCACTCCAAAGGCCATACTAGATTATCTTCTCAAAGATAACACTATCTCAT
TTGGGGGATGTGCCCTTCAGATGTTTCTGGAACTGACACTTGGTAGTGCAGAGGACCTCCTTCTGGCCTT
CATGGCCTATGACAGGTATGTGGCCATTTGTCATCCTCTGAACTATACAATCCTAATGAGTCAGAAAGTC
TGCTGTCTCATGATAGCCACCTCATGGATCCTTGCATCTCTCAGTGCTCTAGGATATAGCATCTACACCA
TGCAATATCCTTTCTGCAAGTCCAGGCAGATCAGACACCTCTTCTGTGAGATTCCTCCCTTGCTAAAGCT
GGCCTGTGCAGACACCTCCACATATGAACTCATGGTTTATGTGATGGGTGTGACCTTGCTCATCCCCCCT
CTTGCTGCCATCCTGGCCTCCTACTCACTAATTCTATTCACTGTGCTGCACATGCCCTCAAATGAGGGCA
GGAAAAAAGCCCTTGTCACCTGCTCTTCCCATCTGACTGTGGTTGGGATGTGGTATGGGGGTGCTATTGT
CATGTATGTATTACCCAGTTCCTTCCACAGCCCCAAACAAGACAATATCAGCTCAGTTTTTTATACAATT
TTCACTCCGGCTTTGAATCCCCTCATCTACAGCCTAAGGAATAAGGAGGTCACTGGGGCTTTGAGGCGAG
TCCTGGGGAAAAGGTTCTCAGTACAGTCTACATTCTAG

Translation (315 aa):
MEVCNSTLGSGFILVGILDDSGFPELLCATITALYFLAITSNGLLLLVITMDARLHVTMYLLLWQLSLMD
LLLTSVITPKAILDYLLKDNTISFGGCALQMFLELTLGSAEDLLLAFMAYDRYVAICHPLNYTILMSQKV
CCLMIATSWILASLSALGYSIYTMQYPFCKSRQIRHLFCEIPPLLKLACADTSTYELMVYVMGVTLLIPP
LAAILASYSLILFTVLHMPSNEGRKKALVTCSSHLTVVGMWYGGAIVMYVLPSSFHSPKQDNISSVFYTI
FTPALNPLIYSLRNKEVTGALRRVLGKRFSVQSTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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