NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21298.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21298.1 Public Mus musculus 7 Mrgpra4 23 108 98 CCDS HistoryNCBI Gene:235854Re-query CCDS DB by CCDS ID:21298.1Re-query CCDS DB by GeneID:235854See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21298.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087092.3 ENSMUSP00000084327.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087092.3Link to Ensembl Protein Viewer:ENSMUSP00000084327.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000087092Re-query CCDS DB by Protein ID:ENSMUSP00000084327
Original member Current member NCBI NM_153524.2 NP_705744.2 Accepted alive Link to Nucleotide Sequence:NM_153524.2Link to Protein Sequence:NP_705744.2Re-query CCDS DB by Nucleotide ID:NM_153524Re-query CCDS DB by Protein ID:NP_705744Link to BLAST:NP_705744.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705744.2 313 Q91WW2 313 100% 0 0

Chromosomal Locations for CCDS 21298.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 47980910 47981851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGCACCCACAACAACAAATCCAATGAACGAAACCATCCCTGGAAGTATTGACATCGAGACCCTGATCC
CAAACTTGATGATCATCATCTTCGGACTGGTCGGGCTGACAGGAAATGTCATTTTGTTTTGGCTCCTGGG
CTTCCACTTGCACAGGAATGCCTTCTTAGTCTACATCCTAAACTTGGCCCTGGCTGACTTCCTCTTCCTT
CTCTGTCACATCATAAATTCCACAATGCTTCTTCTCAAGGTTCACCTACCCAACAATATTTTGAACCATT
GCTTTGACATCATCATGACAGTTCTCTACATCACAGGCCTGAGCATGCTCAGTGCCATCAGCACTGAGCG
CTGCCTGTCTGTCCTGTGCCCCATCTGGTATCGGTGCCGCCGCCCAGAACACACATCAACTGTCCTGTGT
GCTGTGATCTGGTTCCTGCCCCTGTTGATCTGCATTCTGAATGGATATTTCTGTCATTTCTTTGGTCCCA
AATATGTAATTGACTCTGTGTGTCTGGCAACGAACTTCTTTATCAGAACATACCCGATGTTTTTGTTTAT
AGTCCTCTGTCTGTCCACCCTGGCTCTGCTGGCCAGGTTGTTCTGTGGTGCTGGGAAGACGAAATTTACC
AGATTATTCGTGACCATCATGCTGACCGTTTTGGTTTTTCTTCTCTGTGGGTTGCCCCTGGGCTTCTTCT
GGTTTCTGGTGCCCTGGATTAACCGTGATTTCAGTGTACTAGATTATATACTTTTTCAGACATCACTTGT
CCTAACTTCTGTTAACAGCTGTGCCAACCCCATCATTTACTTCTTTGTGGGCTCCTTCAGGCATCGGTTG
AAGCACAAGACCCTCAAAATGGTTCTCCAGAGTGCATTGCAGGACACTCCTGAGACACCTGAAAACATGG
TGGAGATGTCAAGAAGCAAAGCAGAGCCGTGA

Translation (313 aa):
MAPTTTNPMNETIPGSIDIETLIPNLMIIIFGLVGLTGNVILFWLLGFHLHRNAFLVYILNLALADFLFL
LCHIINSTMLLLKVHLPNNILNHCFDIIMTVLYITGLSMLSAISTERCLSVLCPIWYRCRRPEHTSTVLC
AVIWFLPLLICILNGYFCHFFGPKYVIDSVCLATNFFIRTYPMFLFIVLCLSTLALLARLFCGAGKTKFT
RLFVTIMLTVLVFLLCGLPLGFFWFLVPWINRDFSVLDYILFQTSLVLTSVNSCANPIIYFFVGSFRHRL
KHKTLKMVLQSALQDTPETPENMVEMSRSKAEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH