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Report for CCDS20951.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20951.1 Public Mus musculus 7 Cadm4 23 108 98 CCDS HistoryNCBI Gene:260299Re-query CCDS DB by CCDS ID:20951.1Re-query CCDS DB by GeneID:260299See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20951.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068023.7 ENSMUSP00000066880.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068023.7Link to Ensembl Protein Viewer:ENSMUSP00000066880.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000068023Re-query CCDS DB by Protein ID:ENSMUSP00000066880
Original member Current member NCBI NM_153112.3 NP_694752.1 Accepted alive Link to Nucleotide Sequence:NM_153112.3Link to Protein Sequence:NP_694752.1Re-query CCDS DB by Nucleotide ID:NM_153112Re-query CCDS DB by Protein ID:NP_694752Link to BLAST:NP_694752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694752.1 388 Q8R464 388 100% 0 0

Chromosomal Locations for CCDS 20951.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24482099 24482162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24499156 24499302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24499513 24499665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24499924 24500058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24500476 24500640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24500732 24500822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24501565 24501737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24502666 24502794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24503512 24503621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGGGCCGGGCCCGGCGCTTCCAGTGGCCGCTGCTGCTGCTGTGGGCGGCCGCGGCGGGGCCAGGGACGG
GACAGGAAGTACAGACCGAGAATGTGACTGTGGCTGAGGGTGGGGTGGCTGAGATCACCTGCCGTCTGCA
TCAGTACGATGGGTCCATAGTCGTCATTCAGAACCCAGCCCGGCAGACCCTCTTTTTCAATGGCACCAGA
GCTCTGAAGGACGAGCGATTCCAGCTGGAGGAGTTCTCCCCGCGCCGGGTGCGCATCAGGCTCTCAGACG
CCCGCCTGGAGGACGAGGGGGGTTACTTCTGCCAGCTCTACACGGAGGACACCCACCATCAGATCGCCAC
GCTCACTGTCTTAGTGGCTCCGGAGAATCCTGTGGTGGAGGTCCGAGAGCAAGCAGTGGAGGGCGGCGAG
GTGGAACTCAGCTGCCTGGTTCCGCGGTCGCGCCCCGCAGCGGTCCTGCGCTGGTATCGGGATCGCAAGG
AGTTGAAAGGAGTGAGCAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCG
TGTGGATCGCAAGGACGACGGTGGTATTGTCATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGACAC
AGCAAGCAGACGCAGTACGTGCTGGATGTGCAGTATTCCCCCACAGCGCGGATCCACGCCTCTCAAGCTG
TAGTGAGGGAGGGAGACACTCTGGTGCTGACCTGTGCTGTCACAGGGAACCCCAGGCCAAACCAGATCCG
CTGGAACCGTGGGAATGAGTCTCTGCCAGAGAGGGCGGAGGCGGTGGGCGAGACGCTCACGCTACCTGGC
CTGGTATCTGCAGATAACGGCACCTACACCTGCGAGGCGGCGAACAAGCACGGCCACGCGAGGGCGCTCT
ACGTGCTTGTGGTCTATGACCCCGGTGCAGTGGTAGAGGCTCAGACATCGGTTCCTTACGCCATTGTGGG
CGGCATCCTGGCGCTACTGGTGTTTCTGATCATATGTGTGCTAGTGGGCATGGTCTGGTGCTCCGTCCGA
CAGAAGGGATCCTATCTGACCCATGAGGCCAGTGGCTTGGATGAGCAGGGAGAAGCCAGAGAAGCCTTCC
TCAATGGCGGCGATGGACACAAACGGAAAGAAGAATTCTTCATTTGA

Translation (388 aa):
MGRARRFQWPLLLLWAAAAGPGTGQEVQTENVTVAEGGVAEITCRLHQYDGSIVVIQNPARQTLFFNGTR
ALKDERFQLEEFSPRRVRIRLSDARLEDEGGYFCQLYTEDTHHQIATLTVLVAPENPVVEVREQAVEGGE
VELSCLVPRSRPAAVLRWYRDRKELKGVSSGQENGKVWSVASTVRFRVDRKDDGGIVICEAQNQALPSGH
SKQTQYVLDVQYSPTARIHASQAVVREGDTLVLTCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPG
LVSADNGTYTCEAANKHGHARALYVLVVYDPGAVVEAQTSVPYAIVGGILALLVFLIICVLVGMVWCSVR
QKGSYLTHEASGLDEQGEAREAFLNGGDGHKRKEEFFI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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