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Report for CCDS20597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20597.1 Public Mus musculus 6 Klra6 23 108 98 CCDS HistoryNCBI Gene:16637Re-query CCDS DB by CCDS ID:20597.1Re-query CCDS DB by GeneID:16637See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20597.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074056.2 ENSMUSP00000073700.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074056.2Link to Ensembl Protein Viewer:ENSMUSP00000073700.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000074056Re-query CCDS DB by Protein ID:ENSMUSP00000073700
Original member NCBI NM_008464.2 NP_032490.1 Updated not alive Link to Nucleotide Sequence:NM_008464.2Link to Protein Sequence:NP_032490.1Re-query CCDS DB by Nucleotide ID:NM_008464Re-query CCDS DB by Protein ID:NP_032490
Current member NCBI NM_008464.3 NP_032490.1 Accepted alive Link to Nucleotide Sequence:NM_008464.3Link to Protein Sequence:NP_032490.1Re-query CCDS DB by Nucleotide ID:NM_008464Re-query CCDS DB by Protein ID:NP_032490Link to BLAST:NP_032490.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032490.1 266 Q60653 266 100% 0 0

Chromosomal Locations for CCDS 20597.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 130013346 130013481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130016642 130016745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130018833 130018972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130022583 130022801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130023638 130023727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130025108 130025219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGAGTGAGCCGGAGGTCACTTACTCAACTGTGAGACTTCATAAGTCTTCAAGGTTGCAGAAACTTGTAA
GG
CATGAGGAGACTCAAGGGCCCAGAGAAGCTGGCTACAGAAAGTGTTCAGTATGCTGGCAGCTCATTGT
G
AAAGCTCTTGGAATCCTCTGTTTCCTTCTTCTTATAACAGTTGCAGTGTTGGCAGTAAAGATTTTTCAG
TAT
GGTCAACACAACCAAGAAATCCATGAAACTCTAAACTACCACCATAACTGCAGCAACATGCAAAGTG
AT
TTCAACTTAAAGGAAGAAATGTTGACAAATAGGTCTATAGACTCTAGGCCAGGCAATGAACTTCTGGA
A
TCCCTCAACAGAGAACAGAACAGAGGGTACAGTGAAACTAAGACAGATTTAGATTCCTCACAGGACACA
G
GG
ACAGGTGTTAAATACTGGTTCTGCTACCGTACTAAATGTTATTATTTCATCATGAACAAAAATACAT
GG
AGTGGATGTAAACAGAACTGCCAGCATTACAGCTTACCCCTTGTGAAGATAGACGATGAAAATGAACT
G
AAATTCCTTCAATTCCAGGTTATTCCAGACAGTTACTGGATTGGATTGTCATATGATAAGGAAAAAAAG
GAG
TGGGCATGGATTGACAATGGCCAATCTAAACTTGACATGAAAATAAGGAAAATGAACTTTAAGCCTG
GA
GGATGTGTATTTTTATCTAAAAGAAGACTAGAAGATACTAACTGTAAAAATTCCCACTACTGTATTTG
T
GGGAAGAAACTGGATAAATTTCCTCATTAA


Translation (266 aa):
MSEPEVTYSTVRLHKSSRLQKLVRHEETQGPREAGYRKCSVCWQLIVKALGILCFLLLITVAVLAVKIFQ
Y
GQHNQEIHETLNYHHNCSNMQSDFNLKEEMLTNRSIDSRPGNELLESLNREQNRGYSETKTDLDSSQDT

G
TGVKYWFCYRTKCYYFIMNKNTWSGCKQNCQHYSLPLVKIDDENELKFLQFQVIPDSYWIGLSYDKEKK
E
WAWIDNGQSK
LDMKIRKMNFKPGGCVFLSKRRLEDTNCKNSHYCICGKKLDKFPH



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser