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Report for CCDS15229.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15229.1 Public Mus musculus 1 Tmem37 23 108 98 CCDS HistoryNCBI Gene:170706Re-query CCDS DB by CCDS ID:15229.1Re-query CCDS DB by GeneID:170706See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15229.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056089.7 ENSMUSP00000050862.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056089.7Link to Ensembl Protein Viewer:ENSMUSP00000050862.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000056089Re-query CCDS DB by Protein ID:ENSMUSP00000050862
Original member NCBI NM_019432.2 NP_062305.1 Updated not alive Link to Nucleotide Sequence:NM_019432.2Link to Protein Sequence:NP_062305.1Re-query CCDS DB by Nucleotide ID:NM_019432Re-query CCDS DB by Protein ID:NP_062305
Current member NCBI NM_019432.3 NP_062305.1 Accepted alive Link to Nucleotide Sequence:NM_019432.3Link to Protein Sequence:NP_062305.1Re-query CCDS DB by Nucleotide ID:NM_019432Re-query CCDS DB by Protein ID:NP_062305Link to BLAST:NP_062305.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062305.1 211 Q9JJV3 211 100% 0 0

Chromosomal Locations for CCDS 15229.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 120067710 120068324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 120073712 120073732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGACGGCCATCGGCGCGCAGGCCCACAAGCTGTTGGGCCTTAAGAGGCCCCACCGGTCTTTCTTTGAGT
CCTTCATCCGGACACTCATCATCGTGTGCACTGCCCTGGCTGTGGTCCTTTCTTCAGTCTCCATCTGCGA
TGGCCACTGGCTCCTAGTGGAGGATCATCTCTTTGGGCTGTGGTACTTCTGCACCATCGGCAACCACAGT
GAACCACACTGTCTGAGAGACCTGAGCCAGGCCCATATGCCCGGGCTGGCTGTAGGCATGGGCCTAGCAC
GCAGTGTGGCCGCCATGGCAGTGGTGGCTGCCATCTTCGGCTTGGAGATGCTCATTGTGTCCCAGGTGTG
TGAAGATGTCCGCTCACGGCGCAAGTGGGCCATCGGTTCCTACCTCCTCCTGGTTGCCTTTATCCTCTCC
TCTGGGGGCCTCCTCACCTTCATCATCCTGCTCAAGAATCAGATCAACCTCCTGGGCTTCACCCTGATGT
TCTGGTGTGAATTCACTGCCTCCTTCCTCTTCTTCCTCAATGCCGCCAGCGGCCTTCACATCAACAGCCT
CACTCAGCCCTGGGACCCTCCAGCAGGGACCCTGGCTTACAGAAAGCGAGGTTATGATGGGACTTCTCTG
ATATAG

Translation (211 aa):
MTAIGAQAHKLLGLKRPHRSFFESFIRTLIIVCTALAVVLSSVSICDGHWLLVEDHLFGLWYFCTIGNHS
EPHCLRDLSQAHMPGLAVGMGLARSVAAMAVVAAIFGLEMLIVSQVCEDVRSRRKWAIGSYLLLVAFILS
SGGLLTFIILLKNQINLLGFTLMFWCEFTASFLFFLNAASGLHINSLTQPWDPPAGTLAYRKRGYDGTSL
I


Links Key
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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