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Report for CCDS36652.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36652.1 Public Mus musculus 13 Kif13a 23 108 98 CCDS HistoryNCBI Gene:16553Re-query CCDS DB by CCDS ID:36652.1Re-query CCDS DB by GeneID:16553See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36652.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056978.7 ENSMUSP00000055304.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056978.7Link to Ensembl Protein Viewer:ENSMUSP00000055304.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000056978Re-query CCDS DB by Protein ID:ENSMUSP00000055304
Original member Current member NCBI NM_010617.2 NP_034747.2 Accepted alive Link to Nucleotide Sequence:NM_010617.2Link to Protein Sequence:NP_034747.2Re-query CCDS DB by Nucleotide ID:NM_010617Re-query CCDS DB by Protein ID:NP_034747Link to BLAST:NP_034747.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034747.2 1749 Q9EQW7 1749 99.7713% 0 4

Chromosomal Locations for CCDS 36652.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 46750606 46750626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46752081 46752872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46761273 46761424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46763348 46763453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46764600 46764647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46769154 46769231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46771217 46771369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46771506 46771598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46772771 46772947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46773584 46773708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46775403 46775458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46777087 46777213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46778894 46778993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46785246 46785392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46786513 46786645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46788058 46788209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46791334 46791507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46793891 46794052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46798342 46798491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46799193 46799333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46801281 46801443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46802516 46802729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46808891 46809057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46809158 46809244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46810691 46810821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46812729 46812863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46814160 46814270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46815210 46815422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46816287 46816398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46823949 46824061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46825206 46825340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46826693 46826780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46830794 46830974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46832724 46832816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46848326 46848386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46864819 46864831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46929216 46929306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 46929567 46929621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5250 nt):
ATGTCGGATACGAAGGTAAAAGTTGCCGTCCGGGTCCGGCCCATGAACCGAAGAGAGCTGGAACTGAACA
CCAAGTGCGTGGTGGAGATGGAAGGGAACCAGACGGTCCTGCACCCTCCTCCTTCCAACACTAAGCAGGG
AGAAAGAAAACCTCCCAAGGTGTTTGCCTTTGATTATTGCTTTTGGTCCATGGATGAATCGAACACAACA
AAATATGCTGGTCAAGAAGTCGTTTTCAAGTGCCTCGGGGAAGGAATTCTCGAGAAAGCCTTTCAGGGAT
ACAATGCTTGTATTTTTGCATATGGCCAGACAGGTTCTGGAAAGTCCTTTTCCATGATGGGCCACGCAGA
GCAGCTGGGCCTTATCCCAAGGCTCTGCTGTGCTCTGTTTCAAAGGATCGCCCTGGAGCAAAATGAGTCA
CAGACCTTCAAAGTCGAGGTATCGTATATGGAGATCTATAACGAGAAGGTCCGGGACCTCTTGGACCCCA
AAGGGAGCAGGCAGTCTCTGAAAGTCCGAGAGCATAAGGTCCTGGGGCCGTATGTCGATGGTCTGTCTCA
GCTGGCTGTCACCAGCTTTGAGGACATTGAGTCACTGATGTCTGAGGGAAATAAGTCTCGAACGGTAGCA
GCGACCAACATGAATGAGGAGAGCAGCCGTTCCCATGCGGTCTTCAACATCATCATCACACAGACGCTGT
ATGACCTACAGTCTGGGAACTCCGGGGAGAAGGTCAGCAAGGTGAGCCTGGTAGACCTGGCGGGGAGCGA
GAGAGTGTCGAAGACTGGAGCTGCGGGTGAGCGGCTGAAAGAAGGCAGCAACATTAACAAATCCCTTACA
ACCTTGGGATTGGTTATATCGTCACTGGCTGACCAGGCTGCTGGCAAAGGCAAAAACAAATTCGTGCCTT
ATCGAGATTCGGTCCTTACTTGGCTTCTTAAGGACAATTTAGGAGGGAACAGCCAGACCTCTATGATAGC
GACCATCAGCCCAGCAGCAGACAACTATGAGGAGACACTGTCCACGCTAAGATATGCAGATCGAGCCAAG
AGGATTGTGAACCACGCTGTGGTGAATGAGGACCCCAATGCCAAGGTCATCCGAGAGCTTCGAGAGGAAG
TGGAGAAACTGAGGGAGCAGCTCTCGCAGGCTGAGGCCATGAAGGCCCCCGAGCTAAAGGAGAAGCTCGA
AGAGTCTGAGAAGCTGATAAAGGAGCTAACGGTGACGTGGGAAGAGAAGCTGAGGAAAACAGAAGCGATC
GCACAGGAGAGACAGCGGCAGCTGGAAAGCATGGGAATCTCCCTGGAGACCTCTGGCATCAAGGTGGGGG
ACGACAAGTGCTACCTCGTCAACCTGAACGCAGACCCTGCCCTCAACGAGCTTCTGGTTTACTATTTAAA
GGATCATACCCGGGTGGGTGCAGATACCTCTCAGGACATCCAGCTCTTCGGAATAGGGATTCAGCCCGAG
CACTGTGAGATCGACATCGCAGCGGATGGAGACATCACTCTCACGCCCAAAGAAAATGCAAGGTCCTGTG
TCAATGGCACCCTTGTCTGCAGTACTACCCAGCTGTGGCACGGCGACAGGATCTTATGGGGAAACAACCA
CTTTTTTAGAATTAACTTGCCTAAGAGGAAACGGCGGGACTGGTTGAAAGACTTTGAGAGAGAAACCAGT
TCCGCGGAGCACGATCTAGACGCTGCGAGCGAGGCTTCCTCGGAGCCAGACTACAACTACGAGTTCGCAC
AGATGGAGGTCATCATGAAAACACTGAACAGCAATGATCCAGTTCAAAATGTGGTTCAGGTCCTGGAGAA
GCAGTACCTGGAAGAGAAGCGGACCGCCCTGGAGGAACAGCGGCTCATGTACGAACGCGAGCTGGAGCAG
CTTCGCCAGCAGCTCTCTCCCGAGAGGCAGCCGCCCAGCAGCGCCTCAGACCGTCTGGCCTACAGCAGCC
AGACAGCCCAGCAGAAGGTGACCCAGTGGGCCGAGGAGAGGGATGAACTCTTTAGGCAGAGCTTGGCCAA
GCTTCGAGAGCAGCTGGTGAAAGCCAACACTTTGGTGAGGGAAGCCAACTTCCTAGCCGAGGAGATGAGC
AAGCTCACTGACTACCAAGTGACTCTGCAGATCCCTGCGGCCAACCTCAGTGCCAACAGGAAGAGAGGCG
CAATCGTCAGCGAGCCCGCCATCCAAGCCAGGAGGAAAGGGAAGGGCACCCAGGTCTGGACCATTGAGAA
GCTGGAGAATAAGCTAATTGATATGAGAGACCTTTACCAAGAATGGAAAGAAAATGTTCCTGAGGCCAAG
AGGCTCTATGGGAAGCGAGGTGACCCTTTTTATGAAGCGCAGGAGAATCACAACCTCATTGGTGTGGCTA
ATGTGTTTTTGGAATGTCTCTTCTGTGATGTGAAGCTTCAATATGCAGTACCCATCATCAGCCAGCAGGG
GGAGGTTGCCGGGCGCCTCCATGTGGAGGTGACGCGCATTACAGGAACCATTCCAGAACGCATGGCGGAG
GATGACTCTTCAGAGAACTCTAGTGAGAGCGGGAGTCTTGAAGTGGTCGACAGCAGCGGCGAAGTCATTC
ACCGGGTCAAAAAGCTGACATGCAGGGTGATAATTAAAGAGGCAACCGGGCTACCCATAAGCCTCTCAAA
TTTCGTCTTCTGTCAGTACACGTTCTGGGACCAGTGTGAGTCTACAGTGGCTGCTCCAGTGGTGGACCCA
GATGTGCCCTCCCCGCAGTCCAAGGACGCACAGTACACGGTGACCTTCTCTCACTGTAAGGACTATGTGG
TGACTGTCACAGAAGAGTTCCTGGAGTTCATTTCTGATGGTGCGCTGGCGATTGAAGTGTGGGGCCACAG
GTGTGCTGGGAACGGAAGCCCCATCTGGGAGGTGGACTCGCTCCATGCGAAGACAAGGACATTGCATGAC
AGGTGGAATGAAGTGACCCGGAGAATAGAGGTGTGGATCTCCATTCTGGAGCTGAATGAGCTCGGGGATT
ATGCCGCTGTGGAGCTTCACCAGGCGAAAGACGTCAACACCGGCGGCGTCTTCCAACTCAGACAGGGTCA
CTCCCGTAGAGTGCAGGTCACAGTGAAACCTGTACAGCACTCAGGGACACTGCCACTCATGGTTGAAGCC
ATCCTATCAGTATCCATTGGCTGCGTGACCGCCAGGTCCACCAAGCTGCAGAGAGGGCTGGACAGCTACC
AGGAAGAAGACTTGAATTGTGTAAGAGAGAGATGGTCCGATGCACTCATTAAACGACGGGAATACTTAGA
CGAACAGATTAAAAAAGTCAGCAATAAAAAAGAGAAAACAGAAGACGACATGGAGCGGGAAGCCAGGCTG
GTGGAGCAGTGGGTGGGGCTGACAGAGGAGAGGAATGCTGTGCTGGTGCCCGCCCCTGGCAGCGGAATCC
CCGGGGCACCTGCTGACTGGGTCCCACCTCCTGGCATGGAAACACACATCCCGGTTCTCTTCCTGGATCT
GAACGCGGATGACCTCAGTGCCAATGAGCAGCTGGTGGGCCCCCATGCGTCCGGTGTGAACTCCATCCTG
CCCAAGGAACACGGCAGTCAGTTTTTCTACCTGCCCATCATAAAGCACAGTGATGACGAGGTTTCAGCCA
CAGCCTCCTGGGACTCCTCTGTGCACGACTCTCTTCACCTGAATCGGGTCACACCGCAGAATGAAAGGAT
CTACCTGATCGTGAAGACCACCGTGCAGCTCAGCCACCCGGCCGCCATGGAGCTAGTGTTGCGGAAGCGG
ATCGCGGCCAATATTTATAACAAGCAGAGTTTCACCCAGAGTTTGAAGAGACGAATATCACTGATCAATA
TATGTTACTCCTGCGGCGTGACCTATGAGATAGTATCCAATATCCCAAAGGCGACCGAGGAGATTGAGGA
CCGGGAAACCCTGGCCCTCCTGGCAGCGCGGAGTGAGAACGAGGGCACTTTGGATGGGGAGACATACATC
GAGAAGTACACGCGGGGCGTGCTGCAGGTGGAGAATATCCTGAGCCTGGAGCGGCTCCGGCAGGCTGTCA
CGGTGAAGGAAGCGCTTTCCACCAAAGCGAGGCACATTCGGAGAAGCCTCAGTACACCGAACGTTCACAA
CGTCTCCTCTAGCCGGCCAGATCTCTCTGGCTTCGATGAAGACGATAAGGGCTGGCCCGAGAACCAGTTA
GACGTGTCTGACTACAGCTCCAGCTACCAAGACGTCGCGTGCTATGGGACTTTACCCAGGGACTCACCTC
GCAGGAGCAAGGAAGGTTGTCCATCAGAGAATCCTCATGCCTTAACAGTCAGCCCTTTTAAAGCGTTCTC
TCCTCAGCCACCAAAGTTCTTCAAACCCCTCATGCCTGTAAAAGAGGAGCATAAGAAAAGGTTGGCCCTG
GAAGCCAGACCTCTCCTAAGCCAAGAGGACTCGGAAGAGGAGGAAAACGAGCTGGAAGCTCTCAGCAGGA
AGCTGATGCTTACACAGCCTTATGTGCCCGTGGAGTTCGCTGACTTCAGTGTTTACAATGCCAGCTTGGA
GAACAGGGAGTGGTCCTCTTCTAAGGCGGACCTGACAGACTCGAGAGCCTTGGAGAAAGCAGTGTCCCGT
AGCCCTACCACCAGCAGCCTCACCAGTGGCTACTTCTCCCACAGTGCCTCCAATGCCACTCTGTCTGACA
TGGCAGTCCCCTCCAGCGACAGCTCAGACCAGCTTGCCGTCTCGACAAAGGAGGTCGAGTGCGCCGAGCC
CCCGGGACCATCACTTGCACCGGATGTCAGACCAGCTTCGAATCAGGAGCTTACAGAAGTAGGAAGAGGC
TCAGGGAAGGATGAGACAATCGCTGTGCCGCTGGAGGAAAACAGTGCCTTACCCAAGGGGACCCCGTCAC
CCCAGAGCATCCCTGAGGAAAGTTCCAGAATGCCATGCAGGACTGCTTCATGTTCAGAACTGGATGTCGG
CCCCAGCAAAGATGGCCACCAAGCCAGAGAATTCTGCCCAGGAGAGGTGACGATAGAACACACTACAAAC
ATTTTGGAGGACCATTCCTTCACAGAGTTCATGGGTGTTTCTGATGGCAAAGACTTTGATGGTTTGGCAG
ATTGTTCTGTAGGGGAGCCCTCCAGGAGGAGGGCTCTAACAAACGAAACAGACCATAAAGGTATCCCAGA
AAGACCTCCAGATGCCGACCGGCTGCATCCCAAGATAGAGAACGACCAGGAAGCCACAGCCACTCGGTAA

Translation (1749 aa):
MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYCFWSMDESNTT
KYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLGLIPRLCCALFQRIALEQNES
QTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVA
ATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLT
TLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAK
RIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEAI
AQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPE
HCEIDIAADGDITLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFERETS
SAEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRTALEEQRLMYERELEQ
LRQQLSPERQPPSSASDRLAYSSQTAQQKVTQWAEERDELFRQSLAKLREQLVKANTLVREANFLAEEMS
KLTDYQVTLQIPAANLSANRKRGAIVSEPAIQARRKGKGTQVWTIEKLENKLIDMRDLYQEWKENVPEAK
RLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVTRITGTIPERMAE
DDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVIIKEATGLPISLSNFVFCQYTFWDQCESTVAAPVVDP
DVPSPQSKDAQYTVTFSHCKDYVVTVTEEFLEFISDGALAIEVWGHRCAGNGSPIWEVDSLHAKTRTLHD
RWNEVTRRIEVWISILELNELGDYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTVKPVQHSGTLPLMVEA
ILSVSIGCVTARSTKLQRGLDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKKEKTEDDMEREARL
VEQWVGLTEERNAVLVPAPGSGIPGAPADWVPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSIL
PKEHGSQFFYLPIIKHSDDEVSATASWDSSVHDSLHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKR
IAANIYNKQSFTQSLKRRISLINICYSCGVTYEIVSNIPKATEEIEDRETLALLAARSENEGTLDGETYI
EKYTRGVLQVENILSLERLRQAVTVKEALSTKARHIRRSLSTPNVHNVSSSRPDLSGFDEDDKGWPENQL
DVSDYSSSYQDVACYGTLPRDSPRRSKEGCPSENPHALTVSPFKAFSPQPPKFFKPLMPVKEEHKKRLAL
EARPLLSQEDSEEEENELEALSRKLMLTQPYVPVEFADFSVYNASLENREWSSSKADLTDSRALEKAVSR
SPTTSSLTSGYFSHSASNATLSDMAVPSSDSSDQLAVSTKEVECAEPPGPSLAPDVRPASNQELTEVGRG
SGKDETIAVPLEENSALPKGTPSPQSIPEESSRMPCRTASCSELDVGPSKDGHQAREFCPGEVTIEHTTN
ILEDHSFTEFMGVSDGKDFDGLADCSVGEPSRRRALTNETDHKGIPERPPDADRLHPKIENDQEATATR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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