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Report for CCDS14930.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
14930.1 |
Public |
Mus musculus |
1 |
Bivm |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:246229](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:14930.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:246229](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 14930.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000035991.7 |
ENSMUSP00000041964.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000035991.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000041964.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000035991](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000041964](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000114709.2 |
ENSMUSP00000110357.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000114709.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000110357.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000114709](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000110357](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001357046.1 |
NP_001343975.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001357046.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001343975.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001357046](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001343975](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001343975.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001357047.1 |
NP_001343976.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001357047.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001343976.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001357047](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001343976](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001343976.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001357048.1 |
NP_001343977.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001357048.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001343977.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001357048](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001343977](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001343977.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_144558.4 |
NP_653141.3 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_144558.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_653141.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_144558](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_653141](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_653141.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 14930.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1509 nt): ATGCCTAACGCCACTGAAGCTGGAAAAGCCACTGATCCTGGACATGGTGAGCACACATCTGAGAACAAGT CACCAGAAGAGGGTCTACAAGGTGCTGTACCATCTTTCTATACAAGTGCCTCAGAAGCACCCATAGCGCC CAGAGGAGATGGGCATTATCCATCGAGTTGTCCAGTGACTCACACTCGAGAGAAAATTTATGCGATCTGC TCAGATTATGCCTTCCTCAACCAGGCAACATCAGTCTACAAAACTCCTAGCCTAACCCGCTCTGCTTGCC TCCCTGATAACACCTCTCTTTCTGCTGGAAATACTACAAGATATATTGGAATTTCAACTAGTACATCAGA AATAATCTATAATGAAGAAAATAACTTGGAAAACTTGTCCACTGGCATGGGCAAGCTACCTCTTGCATGG GAGATTGATAAATCTGAATTTGATGGGGTGACTACAAATTTGATACATAAGTCAGGCAATGTAAAGAAAC AATTTTCCAAGAAGAAAACGTCGGATAAAAAAGGGCGGCATCAGAGGGAGTGTCTCCACTATTCTCCTCT TGATGATGTTAAACAACGCAAAGTGTTAGACCTTAGGCGATGGTACTGCATAAGCCGACCACAGTACAAG ACTTCATGTGGTATCTCCTCATTGATTTCTTGTTGGAATTTCTTATACAGCATAATGGGAGCTGGGAATC TCCCACCTATTACCCAAGAAGAGGCATTACATATTTTGGGCTTCCAACCCCCATTTGAAGATATTAGGTT TGGCCCTTTCACTGGAAATACAACACTCATGAGATGGTTTAGACAAATTAATGACCACTTTCATGTGAAA GGATGCTCTTATGTTCTATATAAGCCCCATGGGAAGAACAAAACAGCTGGAGAAACTGCTCCAGGGGCCT TATCAAAGTTGACCCGAGGATTGAAAGATGAGTCACTGGCTTATATCTATCATTGCCAAAATCACTATTT CTGTCCAATTGGCTTTGAAGCAACCCCTGTGAAAGCTAATAAAGCATTCAGCAGGGGGCCCCTCTCTTCA CAAGAAGTAGAATACTGGATTTTAATTGGAGAGTCAAGTAGAAAACATCCTGCCATTCACTGTAAAAGAT GGGCAGATATTGTCACTGATCTAAACACTCAAAATCCAGAATTCTTAGATATCCGACATCTAGAGAGGGG GCTGCAGTTCCGGAAAACAAAGAAGGTTGGAGGAAATTTGCATTGCATCATAGCATTCCAGAGACTCAGT TGGCAGAGATTTGGCTTTTGGAACTTTCCATTTGGAACCATTACACAAGAATCACAACATCCCACACATG TCCCGGGAATTGCCAAATCTGAGAGTGAGGACAATATCTCTAAGAAGCAGCATGGGCGCCTGGGCAGGTC CTTCAGTGCGAGTTTCCATCAGGACTCGGCATGGAAGAACATGTCTAGCATCCACGAGAGGAGGAACAGT GGCTACCACAGCTTTAGAGATTATAATGGCAATGACTGA
Translation (502 aa): MPNATEAGKATDPGHGEHTSENKSPEEGLQGAVPSFYTSASEAPIAPRGDGHYPSSCPVTHTREKIYAIC SDYAFLNQATSVYKTPSLTRSACLPDNTSLSAGNTTRYIGISTSTSEIIYNEENNLENLSTGMGKLPLAW EIDKSEFDGVTTNLIHKSGNVKKQFSKKKTSDKKGRHQRECLHYSPLDDVKQRKVLDLRRWYCISRPQYK TSCGISSLISCWNFLYSIMGAGNLPPITQEEALHILGFQPPFEDIRFGPFTGNTTLMRWFRQINDHFHVK GCSYVLYKPHGKNKTAGETAPGALSKLTRGLKDESLAYIYHCQNHYFCPIGFEATPVKANKAFSRGPLSS QEVEYWILIGESSRKHPAIHCKRWADIVTDLNTQNPEFLDIRHLERGLQFRKTKKVGGNLHCIIAFQRLS WQRFGFWNFPFGTITQESQHPTHVPGIAKSESEDNISKKQHGRLGRSFSASFHQDSAWKNMSSIHERRNS GYHSFRDYNGND
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