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Pr012828051

STS probe D2S2165 for copper metabolism domain containing 1 (COMMD1) and 3 more genes

Synopsis

Field NameValues
NameD2S2165
AliasesAFMA130XB5; AFMa130xb5; HSA130XB5; RH31609; RH71602; SHGC-21463
TypeSTS
Application
Source organism
Source sequence
Target organismHomo sapiens
Target genesTFEB; COMMD1; COMMD1; COMMD1
UniSTS IDUniSTS:80322

Sequences

>Probe|12828051|PRIMERF Forward PCR primer (outermost) (16b)
TTGGGCAACAAGCGAG
>Probe|12828051|PRIMERR Reverse PCR primer (outermost) (16b)
CCCGGCAAGAAGGTGC

References

1.

An STS-based radiation hybrid map of the human genome.

Stewart EA, McKusick KB, Aggarwal A, Bajorek E, Brady S, Chu A, Fang N, Hadley D, Harris M, Hussain S, Lee R, Maratukulam A, O'Connor K, Perkins S, Piercy M, Qin F, Reif T, Sanders C, She X, Sun WL, Tabar P, Voyticky S, Cowles S, Fan JB, Mader C, Quackenbush J, Myers RM, Cox DR.

Genome Res. 1997 May;7(5):422-33.

2.

Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Broman KW, Murray JC, Sheffield VC, White RL, Weber JL.

Am J Hum Genet. 1998 Sep;63(3):861-9.

Show All 5 References...

3.

A high-resolution radiation hybrid map of the human genome draft sequence.

Olivier M, Aggarwal A, Allen J, Almendras AA, Bajorek ES, Beasley EM, Brady SD, Bushard JM, Bustos VI, Chu A, Chung TR, De Witte A, Denys ME, Dominguez R, Fang NY, Foster BD, Freudenberg RW, Hadley D, Hamilton LR, Jeffrey TJ, Kelly L, Lazzeroni L, Levy MR, Lewis SC, Liu X, Lopez FJ, Louie B, Marquis JP, Martinez RA, Matsuura MK, Misherghi NS, Norton JA, Olshen A, Perkins SM, Perou AJ, Piercy C, Piercy M, Qin F, Reif T, Sheppard K, Shokoohi V, Smick GA, Sun WL, Stewart EA, Fernando J, Tejeda, Tran NM, Trejo T, Vo NT, Yan SC, Zierten DL, Zhao S, Sachidanandam R, Trask BJ, Myers RM, Cox DR.

Science. 2001 Feb 16;291(5507):1298-302.

4.

A high-resolution recombination map of the human genome.

Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, Richardsson B, Sigurdardottir S, Barnard J, Hallbeck B, Masson G, Shlien A, Palsson ST, Frigge ML, Thorgeirsson TE, Gulcher JR, Stefansson K.

Nat Genet. 2002 Jul;31(3):241-7.

5.

A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Dib C, Fauré S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, Marc S, Hazan J, Seboun E, Lathrop M, Gyapay G, Morissette J, Weissenbach J.

Nature. 1996 Mar 14;380(6570):152-4.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapiensradiation hybridGeneMap99-G322461 cr10000AFMa130xb5
Homo sapiensradiation hybridTNG239266 cr50000SHGC-21463
Homo sapienslinkageRutgers Map2 cmD2S2165
Homo sapienslinkageMarshfield280.69 cmAFMa130xb5
Homo sapienslinkagedeCODE283.98 cmD2S2165
Homo sapienslinkageGenethon283.5 cmAFMa130xb5

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID80322
Probe Cross-refcontext specific help for: Probe Cross-refGDB:603365
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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