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Pr012782794

STS probe D14S742 for T-cell receptor alpha locus (TRA)

Synopsis

Field NameValues
NameD14S742
AliasesCHLC.GATA74E02; CHLC.GATA74E02.P18626; GATA-P18626; GATA74E02; RH28184; RH30201; RH3720; RH53588; SHGC-17594
TypeSTS
Application
Source organism
Source sequence
Target organismHomo sapiens
Target geneTRA
UniSTS IDUniSTS:53175

Sequences

>Probe|12782794|PRIMERF Forward PCR primer (outermost) (20b)
GGCGTGGTTTTCTTTCATAA
>Probe|12782794|PRIMERR Reverse PCR primer (outermost) (20b)
CCTGCCCTCTAACATCAGTG

References

1.

A physical map of human chromosome 7: an integrated YAC contig map with average STS spacing of 79 kb.

Bouffard GG, Idol JR, Braden VV, Iyer LM, Cunningham AF, Weintraub LA, Touchman JW, Mohr-Tidwell RM, Peluso DC, Fulton RS, Ueltzen MS, Weissenbach J, Magness CL, Green ED.

Genome Res. 1997 Jul;7(7):673-92.

2.

Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Broman KW, Murray JC, Sheffield VC, White RL, Weber JL.

Am J Hum Genet. 1998 Sep;63(3):861-9.

Show All 5 References...

3.

A high-resolution recombination map of the human genome.

Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, Richardsson B, Sigurdardottir S, Barnard J, Hallbeck B, Masson G, Shlien A, Palsson ST, Frigge ML, Thorgeirsson TE, Gulcher JR, Stefansson K.

Nat Genet. 2002 Jul;31(3):241-7. Epub 2002 Jun 10.

4.

A fast and scalable radiation hybrid map construction and integration strategy.

Agarwala R, Applegate DL, Maglott D, Schuler GD, Schäffer AA.

Genome Res. 2000 Mar;10(3):350-64.

5.

An STS-based map of the human genome.

Hudson TJ, Stein LD, Gerety SS, Ma J, Castle AB, Silva J, Slonim DK, Baptista R, Kruglyak L, Xu SH, Hu X, Colbert AM, Rosenberg C, Reeve-Daly MP, Rozen S, Hui L, Wu X, Vestergaard C, Wilson KM, Bae JS, Maitra S, Ganiatsas S, Evans CA, DeAngelis MM, Ingalls KA, Nahf RW, Horton LT Jr, Anderson MO, Collymore AJ, Ye W, Kouyoumjian V, Zemsteva IS, Tam J, Devine R, Courtney DF, Renaud MT, Nguyen H, O'Connor TJ, Fizames C, Fauré S, Gyapay G, Dib C, Morissette J, Orlin JB, Birren BW, Goodman N, Weissenbach J, Hawkins TL, Foote S, Page DC, Lander ES.

Science. 1995 Dec 22;270(5244):1945-54.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapiensradiation hybridStanford-G314162 cr10000SHGC-17594
Homo sapienslinkageRutgers Map14 cmD14S742
Homo sapienslinkageMarshfield1412.46 cmGATA74E02
Homo sapienslinkagedeCODE1413.41 cmD14S742
Homo sapiensradiation hybridNCBI RH1428 crSHGC-17594
Homo sapiensradiation hybridWhitehead-RH1428.2 cr3000CHLC.GATA74E02

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID53175
Probe Cross-refcontext specific help for: Probe Cross-refGDB:1298046; GDB:455940
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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