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Pr012781356

STS probe D9S1674 for vacuolar protein sorting 13 homolog A (VPS13A)

Synopsis

Field NameValues
NameD9S1674
Aliases144YE9; AFM144YE9; AFM144ye9; HS144YE9; RH31101; SHGC-20551; W2322
TypeSTS
Application
Source organism
Source sequence
Target organismHomo sapiens
Target geneVPS13A
UniSTS IDUniSTS:53043

Sequences

>Probe|12781356|PRIMERF Forward PCR primer (outermost) (20b)
GGCCTACCCTGTAGACTGAC
>Probe|12781356|PRIMERR Reverse PCR primer (outermost) (22b)
TTAGAAGTGAGCCAAACTCAAA

References

1.

A physical map of human chromosome 7: an integrated YAC contig map with average STS spacing of 79 kb.

Bouffard GG, Idol JR, Braden VV, Iyer LM, Cunningham AF, Weintraub LA, Touchman JW, Mohr-Tidwell RM, Peluso DC, Fulton RS, Ueltzen MS, Weissenbach J, Magness CL, Green ED.

Genome Res. 1997 Jul;7(7):673-92.

2.

An STS-based radiation hybrid map of the human genome.

Stewart EA, McKusick KB, Aggarwal A, Bajorek E, Brady S, Chu A, Fang N, Hadley D, Harris M, Hussain S, Lee R, Maratukulam A, O'Connor K, Perkins S, Piercy M, Qin F, Reif T, Sanders C, She X, Sun WL, Tabar P, Voyticky S, Cowles S, Fan JB, Mader C, Quackenbush J, Myers RM, Cox DR.

Genome Res. 1997 May;7(5):422-33.

Show All 6 References...

3.

Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Broman KW, Murray JC, Sheffield VC, White RL, Weber JL.

Am J Hum Genet. 1998 Sep;63(3):861-9.

4.

A high-resolution recombination map of the human genome.

Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, Richardsson B, Sigurdardottir S, Barnard J, Hallbeck B, Masson G, Shlien A, Palsson ST, Frigge ML, Thorgeirsson TE, Gulcher JR, Stefansson K.

Nat Genet. 2002 Jul;31(3):241-7. Epub 2002 Jun 10.

5.

A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Dib C, Fauré S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, Marc S, Hazan J, Seboun E, Lathrop M, Gyapay G, Morissette J, Weissenbach J.

Nature. 1996 Mar 14;380(6570):152-4.

6.

A fast and scalable radiation hybrid map construction and integration strategy.

Agarwala R, Applegate DL, Maglott D, Schuler GD, Schäffer AA.

Genome Res. 2000 Mar;10(3):350-64.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapiensradiation hybridStanford-G392358 cr10000SHGC-20551
Homo sapiensradiation hybridGeneMap99-G392313 cr10000AFM144ye9
Homo sapienslinkageRutgers Map9 cmD9S1674
Homo sapienslinkageMarshfield976.67 cmAFM144ye9
Homo sapienslinkagedeCODE974.35 cmD9S1674
Homo sapienslinkageGenethon975.8 cmAFM144ye9
Homo sapiensradiation hybridNCBI RH9700.1 crAFM144ye9

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID53043
Probe Cross-refcontext specific help for: Probe Cross-refGDB:582653
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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